RNA–Protein interactions for RNA: ENST00000393811.6

R3HDM2-203, Transcript of R3H domain containing 2, humanhuman

TSL 1 (best)

Gene R3HDM2, Length 3,778 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-203ENST00000393811 CFAP73A6NFT4 308 aa12.72□□□□□ -0.37
R3HDM2-203ENST00000393811 SRRM3A6NNA2 597 aaPredicted RBP12.72□□□□□ -0.37
R3HDM2-203ENST00000393811 DDX39AO00148 427 aaKnown RBP12.72□□□□□ -0.37
R3HDM2-203ENST00000393811 CES2O00748 559 aa12.72□□□□□ -0.37
R3HDM2-203ENST00000393811 AGTP01019 485 aa12.72□□□□□ -0.37
R3HDM2-203ENST00000393811 HOXA13P31271 388 aaPredicted RBP12.72□□□□□ -0.37
R3HDM2-203ENST00000393811 ADCY8P40145 1251 aa12.72□□□□□ -0.37
R3HDM2-203ENST00000393811 DHX34Q14147 1143 aaKnown RBP12.72□□□□□ -0.37
R3HDM2-203ENST00000393811 CLUL1Q15846 466 aa12.72□□□□□ -0.37
R3HDM2-203ENST00000393811 ZCWPW2Q504Y3 356 aa12.72□□□□□ -0.37
R3HDM2-203ENST00000393811 GPATCH4Q5T3I0 446 aaKnown RBP12.72□□□□□ -0.37
R3HDM2-203ENST00000393811 PHLDB2Q86SQ0 1253 aa12.72□□□□□ -0.37
R3HDM2-203ENST00000393811 CATSPER3Q86XQ3 398 aa12.72□□□□□ -0.37
R3HDM2-203ENST00000393811 PPM1KQ8N3J5 372 aa12.72□□□□□ -0.37
R3HDM2-203ENST00000393811 C1orf131Q8NDD1 294 aaKnown RBP12.72□□□□□ -0.37
R3HDM2-203ENST00000393811 SERPINB13Q9UIV8 391 aa12.72□□□□□ -0.37
R3HDM2-203ENST00000393811 PODXLO00592 558 aa12.72□□□□□ -0.37
R3HDM2-203ENST00000393811 ECEL1O95672 775 aa12.72□□□□□ -0.37
R3HDM2-203ENST00000393811 NT5C2P49902 561 aa12.72□□□□□ -0.37
R3HDM2-203ENST00000393811 UBXN2AP68543 259 aa12.72□□□□□ -0.37
R3HDM2-203ENST00000393811 ARHGAP4P98171 946 aa12.72□□□□□ -0.37
R3HDM2-203ENST00000393811 MAPK7Q13164 816 aa12.72□□□□□ -0.37
R3HDM2-203ENST00000393811 EIF1ADQ8N9N8 165 aaKnown RBP12.72□□□□□ -0.37
R3HDM2-203ENST00000393811 CNBD1Q8NA66 436 aa12.72□□□□□ -0.37
R3HDM2-203ENST00000393811 RIOX1Q9H6W3 641 aa12.72□□□□□ -0.37
R3HDM2-203ENST00000393811 USP40Q9NVE5 1235 aa12.72□□□□□ -0.37
R3HDM2-203ENST00000393811 USP15Q9Y4E8 981 aaPredicted RBP12.72□□□□□ -0.37
R3HDM2-203ENST00000393811 CASZ1Q86V15 1759 aa12.72□□□□□ -0.37
R3HDM2-203ENST00000393811 SYNGAP1Q96PV0 1343 aa12.71□□□□□ -0.37
R3HDM2-203ENST00000393811 EEF2P13639 858 aaKnown RBP12.71□□□□□ -0.37
R3HDM2-203ENST00000393811 CHRNA3P32297 505 aa12.71□□□□□ -0.37
R3HDM2-203ENST00000393811 PTENP60484 403 aa12.71□□□□□ -0.37
R3HDM2-203ENST00000393811 KCNA1Q09470 495 aa12.71□□□□□ -0.37
R3HDM2-203ENST00000393811 TAF11Q15544 211 aa12.71□□□□□ -0.37
R3HDM2-203ENST00000393811 SGO2Q562F6 1265 aa12.71□□□□□ -0.37
R3HDM2-203ENST00000393811 CYP4F22Q6NT55 531 aa12.71□□□□□ -0.37
R3HDM2-203ENST00000393811 ZNF365Q70YC5 407 aa12.71□□□□□ -0.37
R3HDM2-203ENST00000393811 SRRM1Q8IYB3 904 aaKnown RBP12.71□□□□□ -0.37
R3HDM2-203ENST00000393811 CCT6BQ92526 530 aa12.71□□□□□ -0.37
R3HDM2-203ENST00000393811 GLT8D2Q9H1C3 349 aa12.71□□□□□ -0.37
R3HDM2-203ENST00000393811 TRPC6Q9Y210 931 aa12.71□□□□□ -0.37
R3HDM2-203ENST00000393811 FAM196BA6NMK8 535 aa12.71□□□□□ -0.37
R3HDM2-203ENST00000393811 H0YGN5 161 aa12.71□□□□□ -0.37
R3HDM2-203ENST00000393811 ATMINO43313 823 aaPredicted RBP12.71□□□□□ -0.37
R3HDM2-203ENST00000393811 CFBP00751 764 aa12.71□□□□□ -0.37
R3HDM2-203ENST00000393811 BRAFP15056 766 aa12.71□□□□□ -0.37
R3HDM2-203ENST00000393811 ZNF543Q08ER8 600 aa12.71□□□□□ -0.37
R3HDM2-203ENST00000393811 CRYMQ14894 314 aa12.71□□□□□ -0.37
R3HDM2-203ENST00000393811 QRICH1Q2TAL8 776 aa12.71□□□□□ -0.37
R3HDM2-203ENST00000393811 LRRC57Q8N9N7 239 aa12.71□□□□□ -0.37
R3HDM2-203ENST00000393811 C1orf54Q8WWF1 131 aa12.71□□□□□ -0.37
R3HDM2-203ENST00000393811 MXD3Q9BW11 206 aa12.71□□□□□ -0.37
R3HDM2-203ENST00000393811 CARD9Q9H257 536 aa12.71□□□□□ -0.37
R3HDM2-203ENST00000393811 ATP6V0A4Q9HBG4 840 aa12.71□□□□□ -0.37
R3HDM2-203ENST00000393811 DIS3Q9Y2L1 958 aaKnown RBP12.71□□□□□ -0.37
R3HDM2-203ENST00000393811 NFS1Q9Y697 457 aa12.71□□□□□ -0.37
R3HDM2-203ENST00000393811 NUP188Q5SRE5 1749 aa12.71□□□□□ -0.37
R3HDM2-203ENST00000393811 TMEM120BA0PK00 339 aa12.71□□□□□ -0.38
R3HDM2-203ENST00000393811 TMEM253P0C7T8 217 aa12.71□□□□□ -0.38
R3HDM2-203ENST00000393811 RHOT2Q8IXI1 618 aa12.71□□□□□ -0.38
R3HDM2-203ENST00000393811 CCHCR1Q8TD31 782 aa12.71□□□□□ -0.38
R3HDM2-203ENST00000393811 PRCCQ92733 491 aaPredicted RBP12.71□□□□□ -0.38
R3HDM2-203ENST00000393811 KCTD10Q9H3F6 313 aa12.71□□□□□ -0.38
R3HDM2-203ENST00000393811 ETNK1Q9HBU6 452 aa12.71□□□□□ -0.38
R3HDM2-203ENST00000393811 CD209Q9NNX6 404 aa12.71□□□□□ -0.38
R3HDM2-203ENST00000393811 DNAJC8O75937 253 aaPredicted RBP12.7□□□□□ -0.38
R3HDM2-203ENST00000393811 GHRP10912 638 aa12.7□□□□□ -0.38
R3HDM2-203ENST00000393811 KRT5P13647 590 aa12.7□□□□□ -0.38
R3HDM2-203ENST00000393811 GBP1P32455 592 aa12.7□□□□□ -0.38
R3HDM2-203ENST00000393811 SARNPP82979 210 aaKnown RBP12.7□□□□□ -0.38
R3HDM2-203ENST00000393811 XRCC4Q13426 336 aa12.7□□□□□ -0.38
R3HDM2-203ENST00000393811 GIT2Q14161 759 aa12.7□□□□□ -0.38
R3HDM2-203ENST00000393811 SLFN13Q68D06 897 aa12.7□□□□□ -0.38
R3HDM2-203ENST00000393811 ZNF653Q96CK0 615 aa12.7□□□□□ -0.38
R3HDM2-203ENST00000393811 ARHGEF26Q96DR7 871 aa12.7□□□□□ -0.38
R3HDM2-203ENST00000393811 PAGR1Q9BTK6 254 aa12.7□□□□□ -0.38
R3HDM2-203ENST00000393811 INTS2Q9H0H0 1204 aaKnown RBP12.7□□□□□ -0.38
R3HDM2-203ENST00000393811 IKZF4Q9H2S9 585 aa12.7□□□□□ -0.38
R3HDM2-203ENST00000393811 ARHGEF35A5YM69 484 aa12.7□□□□□ -0.38
R3HDM2-203ENST00000393811 H0Y3Z8 333 aa12.7□□□□□ -0.38
R3HDM2-203ENST00000393811 PHF2O75151 1096 aa12.7□□□□□ -0.38
R3HDM2-203ENST00000393811 HSPA6P17066 643 aa12.7□□□□□ -0.38
R3HDM2-203ENST00000393811 KRT15P19012 456 aa12.7□□□□□ -0.38
R3HDM2-203ENST00000393811 SESN3P58005 492 aa12.7□□□□□ -0.38
R3HDM2-203ENST00000393811 KCNJ2P63252 427 aa12.7□□□□□ -0.38
R3HDM2-203ENST00000393811 ZNF449Q6P9G9 518 aa12.7□□□□□ -0.38
R3HDM2-203ENST00000393811 SLC30A10Q6XR72 485 aa12.7□□□□□ -0.38
R3HDM2-203ENST00000393811 STK33Q9BYT3 514 aa12.7□□□□□ -0.38
R3HDM2-203ENST00000393811 YIPF3Q9GZM5 350 aa12.7□□□□□ -0.38
R3HDM2-203ENST00000393811 ERVK-5Q9HDB9 667 aa12.7□□□□□ -0.38
R3HDM2-203ENST00000393811 TMEM59LQ9UK28 342 aa12.7□□□□□ -0.38
R3HDM2-203ENST00000393811 ANKRD62A6NC57 917 aa12.7□□□□□ -0.38
R3HDM2-203ENST00000393811 GAS8O95995 478 aa12.7□□□□□ -0.38
R3HDM2-203ENST00000393811 NQO1P15559 274 aaKnown RBP12.7□□□□□ -0.38
R3HDM2-203ENST00000393811 FMO5P49326 533 aa12.7□□□□□ -0.38
R3HDM2-203ENST00000393811 EPHA7Q15375 998 aa12.7□□□□□ -0.38
R3HDM2-203ENST00000393811 SLC35C1Q96A29 364 aa12.7□□□□□ -0.38
R3HDM2-203ENST00000393811 CCDC127Q96BQ5 260 aa12.7□□□□□ -0.38
R3HDM2-203ENST00000393811 TGS1Q96RS0 853 aaKnown RBP12.7□□□□□ -0.38
R3HDM2-203ENST00000393811 PPFIA2O75334 1257 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms