RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 KCNN1Q92952 543 aa12.53□□□□□ -0.4
SMARCAL1-203ENST00000392128 FAM167AQ96KS9 214 aa12.53□□□□□ -0.4
SMARCAL1-203ENST00000392128 CHP1Q99653 195 aa12.53□□□□□ -0.4
SMARCAL1-203ENST00000392128 ZCCHC17Q9NP64 241 aaKnown RBP12.53□□□□□ -0.4
SMARCAL1-203ENST00000392128 VTA1Q9NP79 307 aa12.53□□□□□ -0.4
SMARCAL1-203ENST00000392128 CEP72Q9P209 647 aa12.53□□□□□ -0.4
SMARCAL1-203ENST00000392128 TBX20Q9UMR3 447 aa12.53□□□□□ -0.4
SMARCAL1-203ENST00000392128 PLAGL2Q9UPG8 496 aa12.53□□□□□ -0.4
SMARCAL1-203ENST00000392128 DIS3Q9Y2L1 958 aaKnown RBP12.53□□□□□ -0.4
SMARCAL1-203ENST00000392128 PAXBP1Q9Y5B6 917 aa12.53□□□□□ -0.4
SMARCAL1-203ENST00000392128 H0YCG3 227 aa12.53□□□□□ -0.4
SMARCAL1-203ENST00000392128 NOL4O94818 638 aa12.53□□□□□ -0.4
SMARCAL1-203ENST00000392128 SCP2P22307 547 aa12.53□□□□□ -0.4
SMARCAL1-203ENST00000392128 GRB14Q14449 540 aa12.53□□□□□ -0.4
SMARCAL1-203ENST00000392128 PPP2R5AQ15172 486 aa12.53□□□□□ -0.4
SMARCAL1-203ENST00000392128 DCAF17Q5H9S7 520 aaPredicted RBP12.53□□□□□ -0.4
SMARCAL1-203ENST00000392128 GPR142Q7Z601 462 aa12.53□□□□□ -0.4
SMARCAL1-203ENST00000392128 BAP1Q92560 729 aa12.53□□□□□ -0.4
SMARCAL1-203ENST00000392128 IFT74Q96LB3 600 aa12.53□□□□□ -0.4
SMARCAL1-203ENST00000392128 LSM14BQ9BX40 385 aaKnown RBP12.53□□□□□ -0.4
SMARCAL1-203ENST00000392128 POLR3FQ9H1D9 316 aaPredicted RBP12.53□□□□□ -0.4
SMARCAL1-203ENST00000392128 AZI2Q9H6S1 392 aa12.53□□□□□ -0.4
SMARCAL1-203ENST00000392128 EMSYQ7Z589 1322 aa12.53□□□□□ -0.4
SMARCAL1-203ENST00000392128 NOP56O00567 594 aaKnown RBP12.52□□□□□ -0.4
SMARCAL1-203ENST00000392128 MAPK13O15264 365 aa12.52□□□□□ -0.4
SMARCAL1-203ENST00000392128 EXOC3O60645 756 aa12.52□□□□□ -0.4
SMARCAL1-203ENST00000392128 TXNP10599 105 aaKnown RBP12.52□□□□□ -0.4
SMARCAL1-203ENST00000392128 MAPK4P31152 587 aa12.52□□□□□ -0.4
SMARCAL1-203ENST00000392128 SOX10P56693 466 aa12.52□□□□□ -0.4
SMARCAL1-203ENST00000392128 HSDL1Q3SXM5 330 aa12.52□□□□□ -0.4
SMARCAL1-203ENST00000392128 MAMDC4Q6UXC1 1216 aa12.52□□□□□ -0.4
SMARCAL1-203ENST00000392128 PLPPR4Q7Z2D5 763 aa12.52□□□□□ -0.4
SMARCAL1-203ENST00000392128 DHX37Q8IY37 1157 aaKnown RBP12.52□□□□□ -0.4
SMARCAL1-203ENST00000392128 NUCKS1Q9H1E3 243 aaKnown RBP12.52□□□□□ -0.4
SMARCAL1-203ENST00000392128 PLCB1Q9NQ66 1216 aa12.52□□□□□ -0.4
SMARCAL1-203ENST00000392128 EPN1Q9Y6I3 576 aaPredicted RBP12.52□□□□□ -0.4
SMARCAL1-203ENST00000392128 RBM47A0AV96 593 aaKnown RBP12.52□□□□□ -0.41
SMARCAL1-203ENST00000392128 DENND3A2RUS2 1198 aa12.52□□□□□ -0.41
SMARCAL1-203ENST00000392128 MANSC4A6NHS7 340 aaPredicted RBP12.52□□□□□ -0.41
SMARCAL1-203ENST00000392128 NDUFA10O95299 355 aa12.52□□□□□ -0.41
SMARCAL1-203ENST00000392128 TCERG1LQ5VWI1 586 aa12.52□□□□□ -0.41
SMARCAL1-203ENST00000392128 PDXDC1Q6P996 788 aa12.52□□□□□ -0.41
SMARCAL1-203ENST00000392128 TRIM65Q6PJ69 517 aa12.52□□□□□ -0.41
SMARCAL1-203ENST00000392128 CACNA2D4Q7Z3S7 1137 aa12.52□□□□□ -0.41
SMARCAL1-203ENST00000392128 CCDC170Q8IYT3 715 aa12.52□□□□□ -0.41
SMARCAL1-203ENST00000392128 SLC7A3Q8WY07 619 aa12.52□□□□□ -0.41
SMARCAL1-203ENST00000392128 BBXQ8WY36 941 aaPredicted RBP12.52□□□□□ -0.41
SMARCAL1-203ENST00000392128 SPATA33Q96N06 139 aa12.52□□□□□ -0.41
SMARCAL1-203ENST00000392128 CRACR2AQ9BSW2 395 aa12.52□□□□□ -0.41
SMARCAL1-203ENST00000392128 KIFC3Q9BVG8 833 aa12.52□□□□□ -0.41
SMARCAL1-203ENST00000392128 PDGFCQ9NRA1 345 aa12.52□□□□□ -0.41
SMARCAL1-203ENST00000392128 ARHGAP28Q9P2N2 729 aa12.52□□□□□ -0.41
SMARCAL1-203ENST00000392128 ADGRA3Q8IWK6 1321 aa12.52□□□□□ -0.41
SMARCAL1-203ENST00000392128 ADGRA2Q96PE1 1338 aa12.52□□□□□ -0.41
SMARCAL1-203ENST00000392128 LRRC53A6NM62 1247 aa12.51□□□□□ -0.41
SMARCAL1-203ENST00000392128 ARL2P36404 184 aa12.51□□□□□ -0.41
SMARCAL1-203ENST00000392128 SLC26A2P50443 739 aa12.51□□□□□ -0.41
SMARCAL1-203ENST00000392128 ZNF157P51786 506 aaPredicted RBP12.51□□□□□ -0.41
SMARCAL1-203ENST00000392128 ETF1P62495 437 aaKnown RBP12.51□□□□□ -0.41
SMARCAL1-203ENST00000392128 EXOC3L4Q17RC7 722 aa12.51□□□□□ -0.41
SMARCAL1-203ENST00000392128 DPY19L2P1Q6NXN4 242 aa12.51□□□□□ -0.41
SMARCAL1-203ENST00000392128 TAPT1Q6NXT6 567 aa12.51□□□□□ -0.41
SMARCAL1-203ENST00000392128 PLEKHH3Q7Z736 793 aa12.51□□□□□ -0.41
SMARCAL1-203ENST00000392128 XXYLT1Q8NBI6 393 aa12.51□□□□□ -0.41
SMARCAL1-203ENST00000392128 KIF18AQ8NI77 898 aa12.51□□□□□ -0.41
SMARCAL1-203ENST00000392128 SYN2Q92777 582 aaPredicted RBP12.51□□□□□ -0.41
SMARCAL1-203ENST00000392128 CBWD1Q9BRT8 395 aa12.51□□□□□ -0.41
SMARCAL1-203ENST00000392128 GANQ9H2C0 597 aa12.51□□□□□ -0.41
SMARCAL1-203ENST00000392128 HSPBP1Q9NZL4 362 aa12.51□□□□□ -0.41
SMARCAL1-203ENST00000392128 DCAF8L1A6NGE4 600 aa12.51□□□□□ -0.41
SMARCAL1-203ENST00000392128 TISP43B9A030 160 aa12.51□□□□□ -0.41
SMARCAL1-203ENST00000392128 MCCD1P59942 119 aaPredicted RBP12.51□□□□□ -0.41
SMARCAL1-203ENST00000392128 BFSP1Q12934 665 aa12.51□□□□□ -0.41
SMARCAL1-203ENST00000392128 GBP6Q6ZN66 633 aa12.51□□□□□ -0.41
SMARCAL1-203ENST00000392128 INTS8Q75QN2 995 aaKnown RBP12.51□□□□□ -0.41
SMARCAL1-203ENST00000392128 RRAGAQ7L523 313 aa12.51□□□□□ -0.41
SMARCAL1-203ENST00000392128 ACRBPQ8NEB7 543 aa12.51□□□□□ -0.41
SMARCAL1-203ENST00000392128 GLG1Q92896 1179 aa12.51□□□□□ -0.41
SMARCAL1-203ENST00000392128 KATNBL1Q9H079 304 aa12.51□□□□□ -0.41
SMARCAL1-203ENST00000392128 NHEJ1Q9H9Q4 299 aaPredicted RBP12.51□□□□□ -0.41
SMARCAL1-203ENST00000392128 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.51□□□□□ -0.41
SMARCAL1-203ENST00000392128 FBXL5Q9UKA1 691 aa12.51□□□□□ -0.41
SMARCAL1-203ENST00000392128 MAFO75444 373 aaPredicted RBP12.5□□□□□ -0.41
SMARCAL1-203ENST00000392128 PON1P27169 355 aa12.5□□□□□ -0.41
SMARCAL1-203ENST00000392128 CYLC1P35663 651 aaPredicted RBP12.5□□□□□ -0.41
SMARCAL1-203ENST00000392128 NAMPTP43490 491 aa12.5□□□□□ -0.41
SMARCAL1-203ENST00000392128 DPP9Q86TI2 863 aa12.5□□□□□ -0.41
SMARCAL1-203ENST00000392128 SAPCD2Q86UD0 394 aa12.5□□□□□ -0.41
SMARCAL1-203ENST00000392128 HOMEZQ8IX15 550 aa12.5□□□□□ -0.41
SMARCAL1-203ENST00000392128 ATP8B4Q8TF62 1192 aa12.5□□□□□ -0.41
SMARCAL1-203ENST00000392128 ZNF592Q92610 1267 aa12.5□□□□□ -0.41
SMARCAL1-203ENST00000392128 COPS5Q92905 334 aa12.5□□□□□ -0.41
SMARCAL1-203ENST00000392128 PHLPP2Q6ZVD8 1323 aa12.5□□□□□ -0.41
SMARCAL1-203ENST00000392128 SLC15A5A6NIM6 579 aa12.5□□□□□ -0.41
SMARCAL1-203ENST00000392128 IGF2BP3O00425 579 aaKnown RBP eCLIP12.5□□□□□ -0.41
SMARCAL1-203ENST00000392128 KRT13P13646 458 aa12.5□□□□□ -0.41
SMARCAL1-203ENST00000392128 CNGA1P29973 690 aa12.5□□□□□ -0.41
SMARCAL1-203ENST00000392128 FMO5P49326 533 aa12.5□□□□□ -0.41
SMARCAL1-203ENST00000392128 POLR2FP61218 127 aaKnown RBP12.5□□□□□ -0.41
SMARCAL1-203ENST00000392128 ARHGAP1Q07960 439 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms