RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 SFMBT2Q5VUG0 894 aa19.19■□□□□ 0.66
SQSTM1-202ENST00000389805 SFR1Q86XK3 245 aa19.19■□□□□ 0.66
SQSTM1-202ENST00000389805 CHMP6Q96FZ7 201 aa19.19■□□□□ 0.66
SQSTM1-202ENST00000389805 SCAF8Q9UPN6 1271 aaKnown RBP19.19■□□□□ 0.66
SQSTM1-202ENST00000389805 ABCB11O95342 1321 aa19.18■□□□□ 0.66
SQSTM1-202ENST00000389805 TLDC2A0PJX2 215 aa19.18■□□□□ 0.66
SQSTM1-202ENST00000389805 CFBP00751 764 aa19.18■□□□□ 0.66
SQSTM1-202ENST00000389805 HOXD13P35453 343 aa19.18■□□□□ 0.66
SQSTM1-202ENST00000389805 ZNF76P36508 570 aa19.18■□□□□ 0.66
SQSTM1-202ENST00000389805 KCNA1Q09470 495 aa19.18■□□□□ 0.66
SQSTM1-202ENST00000389805 TRIM59Q8IWR1 403 aa19.18■□□□□ 0.66
SQSTM1-202ENST00000389805 CCDC197Q8NCU1 140 aa19.18■□□□□ 0.66
SQSTM1-202ENST00000389805 PIGOQ8TEQ8 1089 aa19.18■□□□□ 0.66
SQSTM1-202ENST00000389805 C7orf43Q8WVR3 580 aa19.18■□□□□ 0.66
SQSTM1-202ENST00000389805 NAP1L4Q99733 375 aaKnown RBP19.18■□□□□ 0.66
SQSTM1-202ENST00000389805 BHMT2Q9H2M3 363 aa19.18■□□□□ 0.66
SQSTM1-202ENST00000389805 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.18■□□□□ 0.666e-7■□□□□ 10.6
SQSTM1-202ENST00000389805 DNM3Q9UQ16 869 aa19.18■□□□□ 0.66
SQSTM1-202ENST00000389805 RAD17O75943 681 aa19.18■□□□□ 0.66
SQSTM1-202ENST00000389805 MYBP10242 640 aa19.18■□□□□ 0.66
SQSTM1-202ENST00000389805 SREBF1P36956 1147 aa19.18■□□□□ 0.66
SQSTM1-202ENST00000389805 CCDC174Q6PII3 467 aa19.18■□□□□ 0.66
SQSTM1-202ENST00000389805 KDM4CQ9H3R0 1056 aa19.18■□□□□ 0.66
SQSTM1-202ENST00000389805 ATP8A1Q9Y2Q0 1164 aa19.18■□□□□ 0.66
SQSTM1-202ENST00000389805 ACTN1P12814 892 aa19.17■□□□□ 0.66
SQSTM1-202ENST00000389805 NR2F2P24468 414 aa19.17■□□□□ 0.66
SQSTM1-202ENST00000389805 STYK1Q6J9G0 422 aa19.17■□□□□ 0.66
SQSTM1-202ENST00000389805 FAM133AQ8N9E0 248 aa19.17■□□□□ 0.66
SQSTM1-202ENST00000389805 XPO6Q96QU8 1125 aaKnown RBP19.17■□□□□ 0.66
SQSTM1-202ENST00000389805 PSMD1Q99460 953 aa19.17■□□□□ 0.66
SQSTM1-202ENST00000389805 ZBTB12Q9Y330 459 aaPredicted RBP19.17■□□□□ 0.66
SQSTM1-202ENST00000389805 SSU72P8A0A1W2PR75 194 aa19.17■□□□□ 0.66
SQSTM1-202ENST00000389805 ENO4A6NNW6 628 aa19.17■□□□□ 0.66
SQSTM1-202ENST00000389805 CHMP2AO43633 222 aa19.17■□□□□ 0.66
SQSTM1-202ENST00000389805 RPA1P27694 616 aa19.17■□□□□ 0.66
SQSTM1-202ENST00000389805 FLAD1Q8NFF5 587 aa19.17■□□□□ 0.66
SQSTM1-202ENST00000389805 LMBR1Q8WVP7 490 aa19.17■□□□□ 0.66
SQSTM1-202ENST00000389805 ELAC2Q9BQ52 826 aaKnown RBP19.17■□□□□ 0.66
SQSTM1-202ENST00000389805 MTFR1LQ9H019 292 aa19.17■□□□□ 0.66
SQSTM1-202ENST00000389805 TTI1O43156 1089 aa19.17■□□□□ 0.66
SQSTM1-202ENST00000389805 CAND2O75155 1236 aa19.17■□□□□ 0.66
SQSTM1-202ENST00000389805 CTTNQ14247 550 aaKnown RBP19.17■□□□□ 0.66
SQSTM1-202ENST00000389805 Q4G0T1 1027 aa19.17■□□□□ 0.66
SQSTM1-202ENST00000389805 C3orf20Q8ND61 904 aa19.17■□□□□ 0.66
SQSTM1-202ENST00000389805 RUSC1Q9BVN2 902 aa19.17■□□□□ 0.66
SQSTM1-202ENST00000389805 UPP2O95045 317 aa19.16■□□□□ 0.66
SQSTM1-202ENST00000389805 FKBP1AP62942 108 aaKnown RBP19.16■□□□□ 0.66
SQSTM1-202ENST00000389805 KCNH2Q12809 1159 aa19.16■□□□□ 0.66
SQSTM1-202ENST00000389805 NBPF9Q3BBW0 867 aa19.16■□□□□ 0.66
SQSTM1-202ENST00000389805 CC2D2BQ6DHV5 1058 aa19.16■□□□□ 0.66
SQSTM1-202ENST00000389805 MIGA2Q7L4E1 593 aa19.16■□□□□ 0.66
SQSTM1-202ENST00000389805 MICAL1Q8TDZ2 1067 aa19.16■□□□□ 0.66
SQSTM1-202ENST00000389805 AGAP11Q8TF27 550 aa19.16■□□□□ 0.66
SQSTM1-202ENST00000389805 PRCCQ92733 491 aaPredicted RBP19.16■□□□□ 0.66
SQSTM1-202ENST00000389805 PDGFDQ9GZP0 370 aaPredicted RBP19.16■□□□□ 0.66
SQSTM1-202ENST00000389805 CHN1P15882 459 aa19.16■□□□□ 0.66
SQSTM1-202ENST00000389805 CUL1Q13616 776 aa19.16■□□□□ 0.66
SQSTM1-202ENST00000389805 SYT2Q8N9I0 419 aaPredicted RBP19.16■□□□□ 0.66
SQSTM1-202ENST00000389805 CEP63Q96MT8 703 aa19.16■□□□□ 0.66
SQSTM1-202ENST00000389805 GOPCQ9HD26 462 aa19.16■□□□□ 0.66
SQSTM1-202ENST00000389805 VAV3Q9UKW4 847 aa19.16■□□□□ 0.66
SQSTM1-202ENST00000389805 PCDHGC5Q9Y5F6 944 aa19.16■□□□□ 0.66
SQSTM1-202ENST00000389805 KRIT1O00522 736 aa19.15■□□□□ 0.66
SQSTM1-202ENST00000389805 DIAPH2O60879 1101 aa19.15■□□□□ 0.66
SQSTM1-202ENST00000389805 IFNAR2P48551 515 aa19.15■□□□□ 0.66
SQSTM1-202ENST00000389805 SARNPP82979 210 aaKnown RBP19.15■□□□□ 0.66
SQSTM1-202ENST00000389805 MOXD1Q6UVY6 613 aa19.15■□□□□ 0.66
SQSTM1-202ENST00000389805 BZW1Q7L1Q6 419 aaKnown RBP19.15■□□□□ 0.66
SQSTM1-202ENST00000389805 UHMK1Q8TAS1 419 aaKnown RBP19.15■□□□□ 0.66
SQSTM1-202ENST00000389805 EIF2AK1Q9BQI3 630 aaKnown RBP19.15■□□□□ 0.66
SQSTM1-202ENST00000389805 TMEM59LQ9UK28 342 aa19.15■□□□□ 0.66
SQSTM1-202ENST00000389805 SERPING1P05155 500 aa19.15■□□□□ 0.66
SQSTM1-202ENST00000389805 MMEP08473 750 aa19.15■□□□□ 0.66
SQSTM1-202ENST00000389805 SLC9A1P19634 815 aa19.15■□□□□ 0.66
SQSTM1-202ENST00000389805 KCNJ2P63252 427 aa19.15■□□□□ 0.66
SQSTM1-202ENST00000389805 KLHL30Q0D2K2 578 aa19.15■□□□□ 0.66
SQSTM1-202ENST00000389805 AGBL2Q5U5Z8 902 aa19.15■□□□□ 0.66
SQSTM1-202ENST00000389805 ADAT2Q7Z6V5 191 aaKnown RBP19.15■□□□□ 0.66
SQSTM1-202ENST00000389805 ERMNQ8TAM6 284 aa19.15■□□□□ 0.66
SQSTM1-202ENST00000389805 IQCDQ96DY2 449 aa19.15■□□□□ 0.66
SQSTM1-202ENST00000389805 WDR18Q9BV38 432 aa19.15■□□□□ 0.66
SQSTM1-202ENST00000389805 CEP72Q9P209 647 aa19.15■□□□□ 0.66
SQSTM1-202ENST00000389805 AGAP1Q9UPQ3 857 aa19.15■□□□□ 0.66
SQSTM1-202ENST00000389805 C15orf41Q9Y2V0 281 aa19.15■□□□□ 0.66
SQSTM1-202ENST00000389805 HGSO14964 777 aaPredicted RBP19.14■□□□□ 0.66
SQSTM1-202ENST00000389805 CLIC2O15247 247 aa19.14■□□□□ 0.66
SQSTM1-202ENST00000389805 ENTPD3O75355 529 aa19.14■□□□□ 0.66
SQSTM1-202ENST00000389805 KIF4AO95239 1232 aa19.14■□□□□ 0.66
SQSTM1-202ENST00000389805 SHBGP04278 402 aa19.14■□□□□ 0.66
SQSTM1-202ENST00000389805 TMC3Q7Z5M5 1100 aa19.14■□□□□ 0.66
SQSTM1-202ENST00000389805 LRRC34Q8IZ02 419 aa19.14■□□□□ 0.66
SQSTM1-202ENST00000389805 ANKS4BQ8N8V4 417 aa19.14■□□□□ 0.66
SQSTM1-202ENST00000389805 RNF217Q8TC41 542 aa19.14■□□□□ 0.66
SQSTM1-202ENST00000389805 ZNF483Q8TF39 744 aaPredicted RBP19.14■□□□□ 0.66
SQSTM1-202ENST00000389805 HOOK2Q96ED9 719 aa19.14■□□□□ 0.66
SQSTM1-202ENST00000389805 NOC2LQ9Y3T9 749 aaKnown RBP19.14■□□□□ 0.66
SQSTM1-202ENST00000389805 CD2APQ9Y5K6 639 aa19.14■□□□□ 0.66
SQSTM1-202ENST00000389805 CETN3O15182 167 aa19.14■□□□□ 0.65
SQSTM1-202ENST00000389805 VIMP08670 466 aaKnown RBP19.14■□□□□ 0.65
SQSTM1-202ENST00000389805 CASP4P49662 377 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms