RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 PLCD4Q9BRC7 762 aa13.48□□□□□ -0.25
PRPF40B-202ENST00000380281 FLOT1O75955 427 aa13.47□□□□□ -0.25
PRPF40B-202ENST00000380281 LCA5LO95447 670 aa13.47□□□□□ -0.25
PRPF40B-202ENST00000380281 LINGO3P0C6S8 592 aa13.47□□□□□ -0.25
PRPF40B-202ENST00000380281 VPS41P49754 854 aa13.47□□□□□ -0.25
PRPF40B-202ENST00000380281 UAP1Q16222 522 aaPredicted RBP13.47□□□□□ -0.25
PRPF40B-202ENST00000380281 CERKLQ49MI3 558 aaPredicted RBP13.47□□□□□ -0.25
PRPF40B-202ENST00000380281 HOMEZQ8IX15 550 aa13.47□□□□□ -0.25
PRPF40B-202ENST00000380281 BTBD6Q96KE9 485 aa13.47□□□□□ -0.25
PRPF40B-202ENST00000380281 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.47□□□□□ -0.25
PRPF40B-202ENST00000380281 IGSF9BQ9UPX0 1349 aa13.47□□□□□ -0.25
PRPF40B-202ENST00000380281 ATP2B4P23634 1241 aa13.47□□□□□ -0.25
PRPF40B-202ENST00000380281 DRAP1Q14919 205 aaPredicted RBP13.47□□□□□ -0.25
PRPF40B-202ENST00000380281 NSMFQ6X4W1 530 aa13.47□□□□□ -0.25
PRPF40B-202ENST00000380281 OTUD6AQ7L8S5 288 aa13.47□□□□□ -0.25
PRPF40B-202ENST00000380281 SLF2Q8IX21 1173 aa13.47□□□□□ -0.25
PRPF40B-202ENST00000380281 PROM2Q8N271 834 aa13.47□□□□□ -0.25
PRPF40B-202ENST00000380281 TPCN2Q8NHX9 752 aa13.47□□□□□ -0.25
PRPF40B-202ENST00000380281 SLC35G2Q8TBE7 412 aa13.47□□□□□ -0.25
PRPF40B-202ENST00000380281 KCNV2Q8TDN2 545 aa13.47□□□□□ -0.25
PRPF40B-202ENST00000380281 CNKSR2Q8WXI2 1034 aa13.47□□□□□ -0.25
PRPF40B-202ENST00000380281 SLC12A6Q9UHW9 1150 aa13.47□□□□□ -0.25
PRPF40B-202ENST00000380281 PNMA2Q9UL42 364 aa13.47□□□□□ -0.25
PRPF40B-202ENST00000380281 A8MUI8 341 aa13.46□□□□□ -0.25
PRPF40B-202ENST00000380281 PPIP5K2O43314 1243 aa13.46□□□□□ -0.25
PRPF40B-202ENST00000380281 SORBS3O60504 671 aa13.46□□□□□ -0.25
PRPF40B-202ENST00000380281 STAT1P42224 750 aa13.46□□□□□ -0.25
PRPF40B-202ENST00000380281 KCNJ1P48048 391 aa13.46□□□□□ -0.25
PRPF40B-202ENST00000380281 TBC1D25Q3MII6 688 aa13.46□□□□□ -0.25
PRPF40B-202ENST00000380281 TRIM68Q6AZZ1 485 aa13.46□□□□□ -0.25
PRPF40B-202ENST00000380281 VPS36Q86VN1 386 aa13.46□□□□□ -0.25
PRPF40B-202ENST00000380281 ARHGEF26Q96DR7 871 aa13.46□□□□□ -0.25
PRPF40B-202ENST00000380281 TMBIM4Q9HC24 238 aa13.46□□□□□ -0.25
PRPF40B-202ENST00000380281 TSKSQ9UJT2 592 aa13.46□□□□□ -0.25
PRPF40B-202ENST00000380281 DNAJC12Q9UKB3 198 aa13.46□□□□□ -0.25
PRPF40B-202ENST00000380281 RABGAP1Q9Y3P9 1069 aa13.46□□□□□ -0.25
PRPF40B-202ENST00000380281 GOLGA8IPA6NC78 632 aa13.46□□□□□ -0.25
PRPF40B-202ENST00000380281 GOLGA8JA6NMD2 632 aa13.46□□□□□ -0.25
PRPF40B-202ENST00000380281 LGR5O75473 907 aa13.46□□□□□ -0.25
PRPF40B-202ENST00000380281 DNAJC8O75937 253 aaPredicted RBP13.46□□□□□ -0.25
PRPF40B-202ENST00000380281 TRIM37O94972 964 aa13.46□□□□□ -0.25
PRPF40B-202ENST00000380281 MESDQ14696 234 aa13.46□□□□□ -0.25
PRPF40B-202ENST00000380281 LACTB2Q53H82 288 aaPredicted RBP13.46□□□□□ -0.25
PRPF40B-202ENST00000380281 C2CD6Q53TS8 623 aa13.46□□□□□ -0.25
PRPF40B-202ENST00000380281 SLC30A9Q6PML9 568 aa13.46□□□□□ -0.25
PRPF40B-202ENST00000380281 FAM186BQ8IYM0 893 aa13.46□□□□□ -0.25
PRPF40B-202ENST00000380281 PCDHGC5Q9Y5F6 944 aa13.46□□□□□ -0.25
PRPF40B-202ENST00000380281 PCDHA2Q9Y5H9 948 aa13.46□□□□□ -0.25
PRPF40B-202ENST00000380281 ESYT2A0FGR8 921 aa13.46□□□□□ -0.26
PRPF40B-202ENST00000380281 TMEM150BA6NC51 233 aa13.46□□□□□ -0.26
PRPF40B-202ENST00000380281 F5H6K3 240 aa13.46□□□□□ -0.26
PRPF40B-202ENST00000380281 SHBGP04278 402 aa13.46□□□□□ -0.26
PRPF40B-202ENST00000380281 MARCKSL1P49006 195 aa13.46□□□□□ -0.26
PRPF40B-202ENST00000380281 USP11P51784 963 aa13.46□□□□□ -0.26
PRPF40B-202ENST00000380281 SLC12A3P55017 1021 aa13.46□□□□□ -0.26
PRPF40B-202ENST00000380281 KLRC3Q07444 240 aa13.46□□□□□ -0.26
PRPF40B-202ENST00000380281 ZNF844Q08AG5 666 aa13.46□□□□□ -0.26
PRPF40B-202ENST00000380281 ARFGAP2Q8N6H7 521 aa13.46□□□□□ -0.26
PRPF40B-202ENST00000380281 RBM17Q96I25 401 aaKnown RBP13.46□□□□□ -0.26
PRPF40B-202ENST00000380281 DYDC2Q96IM9 177 aa13.46□□□□□ -0.26
PRPF40B-202ENST00000380281 FAM118BQ9BPY3 351 aa13.46□□□□□ -0.26
PRPF40B-202ENST00000380281 THAP2Q9H0W7 228 aa13.46□□□□□ -0.26
PRPF40B-202ENST00000380281 ERVK-5Q9HDB9 667 aa13.46□□□□□ -0.26
PRPF40B-202ENST00000380281 CTTNBP2NLQ9P2B4 639 aa13.46□□□□□ -0.26
PRPF40B-202ENST00000380281 IRS2Q9Y4H2 1338 aa13.46□□□□□ -0.26
PRPF40B-202ENST00000380281 A0A1B0GVG6 124 aa13.45□□□□□ -0.26
PRPF40B-202ENST00000380281 KDM4FA0A1W2PPD8 638 aa13.45□□□□□ -0.26
PRPF40B-202ENST00000380281 EXOC3O60645 756 aa13.45□□□□□ -0.26
PRPF40B-202ENST00000380281 SPATA31C1P0DKV0 1188 aa13.45□□□□□ -0.26
PRPF40B-202ENST00000380281 GNAT1P11488 350 aa13.45□□□□□ -0.26
PRPF40B-202ENST00000380281 TNFAIP3P21580 790 aa13.45□□□□□ -0.26
PRPF40B-202ENST00000380281 SSTR3P32745 418 aaPredicted RBP13.45□□□□□ -0.26
PRPF40B-202ENST00000380281 ABL2P42684 1182 aa13.45□□□□□ -0.26
PRPF40B-202ENST00000380281 KCNJ2P63252 427 aa13.45□□□□□ -0.26
PRPF40B-202ENST00000380281 TRIP13Q15645 432 aaPredicted RBP13.45□□□□□ -0.26
PRPF40B-202ENST00000380281 EMC10Q5UCC4 262 aa13.45□□□□□ -0.26
PRPF40B-202ENST00000380281 SLC20A1Q8WUM9 679 aa13.45□□□□□ -0.26
PRPF40B-202ENST00000380281 CTNNBL1Q8WYA6 563 aaPredicted RBP13.45□□□□□ -0.26
PRPF40B-202ENST00000380281 CEP63Q96MT8 703 aa13.45□□□□□ -0.26
PRPF40B-202ENST00000380281 ADAM33Q9BZ11 813 aa13.45□□□□□ -0.26
PRPF40B-202ENST00000380281 ARHGEF10LQ9HCE6 1279 aa13.45□□□□□ -0.26
PRPF40B-202ENST00000380281 NOP53Q9NZM5 478 aaKnown RBP13.45□□□□□ -0.26
PRPF40B-202ENST00000380281 AMFRQ9UKV5 643 aa13.45□□□□□ -0.26
PRPF40B-202ENST00000380281 CD2APQ9Y5K6 639 aa13.45□□□□□ -0.26
PRPF40B-202ENST00000380281 KDM3AQ9Y4C1 1321 aa13.45□□□□□ -0.26
PRPF40B-202ENST00000380281 MEIS2O14770 477 aa13.45□□□□□ -0.26
PRPF40B-202ENST00000380281 MSH4O15457 936 aa13.45□□□□□ -0.26
PRPF40B-202ENST00000380281 MAP3K13O43283 966 aa13.45□□□□□ -0.26
PRPF40B-202ENST00000380281 GH2P01242 217 aa13.45□□□□□ -0.26
PRPF40B-202ENST00000380281 USP4Q13107 963 aa13.45□□□□□ -0.26
PRPF40B-202ENST00000380281 LRRC14Q15048 493 aa13.45□□□□□ -0.26
PRPF40B-202ENST00000380281 CBWD6Q4V339 395 aa13.45□□□□□ -0.26
PRPF40B-202ENST00000380281 CBWD3Q5JTY5 395 aa13.45□□□□□ -0.26
PRPF40B-202ENST00000380281 CBWD5Q5RIA9 395 aa13.45□□□□□ -0.26
PRPF40B-202ENST00000380281 FBXO11Q86XK2 927 aa13.45□□□□□ -0.26
PRPF40B-202ENST00000380281 SLC35C1Q96A29 364 aa13.45□□□□□ -0.26
PRPF40B-202ENST00000380281 EIF2AK1Q9BQI3 630 aaKnown RBP13.45□□□□□ -0.26
PRPF40B-202ENST00000380281 PIDD1Q9HB75 910 aa13.45□□□□□ -0.26
PRPF40B-202ENST00000380281 HOMER3Q9NSC5 361 aa13.45□□□□□ -0.26
PRPF40B-202ENST00000380281 CNTNAP4Q9C0A0 1308 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms