RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 RIC8AQ9NPQ8 531 aa12.11□□□□□ -0.47
RPRD1B-201ENST00000373433 MYH2Q9UKX2 1941 aa12.11□□□□□ -0.47
RPRD1B-201ENST00000373433 DIAPH2O60879 1101 aa12.11□□□□□ -0.47
RPRD1B-201ENST00000373433 TDP2O95551 362 aa12.11□□□□□ -0.47
RPRD1B-201ENST00000373433 ARHGAP4P98171 946 aa12.11□□□□□ -0.47
RPRD1B-201ENST00000373433 ZNF483Q8TF39 744 aaPredicted RBP12.11□□□□□ -0.47
RPRD1B-201ENST00000373433 SAAL1Q96ER3 474 aa12.11□□□□□ -0.47
RPRD1B-201ENST00000373433 CHMP6Q96FZ7 201 aa12.11□□□□□ -0.47
RPRD1B-201ENST00000373433 GMCL1Q96IK5 515 aa12.11□□□□□ -0.47
RPRD1B-201ENST00000373433 DDX47Q9H0S4 455 aaKnown RBP12.11□□□□□ -0.47
RPRD1B-201ENST00000373433 DPH5Q9H2P9 285 aa12.11□□□□□ -0.47
RPRD1B-201ENST00000373433 LUC7LQ9NQ29 371 aaKnown RBP12.11□□□□□ -0.47
RPRD1B-201ENST00000373433 CCT8L1PA6NM43 557 aa12.1□□□□□ -0.47
RPRD1B-201ENST00000373433 KLRC1P26715 233 aa12.1□□□□□ -0.47
RPRD1B-201ENST00000373433 MAP2K1Q02750 393 aaPredicted RBP12.1□□□□□ -0.47
RPRD1B-201ENST00000373433 AP3B2Q13367 1082 aa12.1□□□□□ -0.47
RPRD1B-201ENST00000373433 COG2Q14746 738 aa12.1□□□□□ -0.47
RPRD1B-201ENST00000373433 KIAA0753Q2KHM9 967 aa12.1□□□□□ -0.47
RPRD1B-201ENST00000373433 VWA3BQ502W6 1294 aa12.1□□□□□ -0.47
RPRD1B-201ENST00000373433 TPH2Q8IWU9 490 aa12.1□□□□□ -0.47
RPRD1B-201ENST00000373433 SLFN12Q8IYM2 578 aa12.1□□□□□ -0.47
RPRD1B-201ENST00000373433 GLIS2Q9BZE0 524 aaPredicted RBP12.1□□□□□ -0.47
RPRD1B-201ENST00000373433 TRPC6Q9Y210 931 aa12.1□□□□□ -0.47
RPRD1B-201ENST00000373433 SRRM3A6NNA2 597 aaPredicted RBP12.1□□□□□ -0.47
RPRD1B-201ENST00000373433 C19orf81C9J6K1 198 aa12.1□□□□□ -0.47
RPRD1B-201ENST00000373433 DNAJC8O75937 253 aaPredicted RBP12.1□□□□□ -0.47
RPRD1B-201ENST00000373433 VIMP08670 466 aaKnown RBP12.1□□□□□ -0.47
RPRD1B-201ENST00000373433 NPY5RQ15761 445 aa12.1□□□□□ -0.47
RPRD1B-201ENST00000373433 ARL6IP4Q66PJ3 421 aaKnown RBP12.1□□□□□ -0.47
RPRD1B-201ENST00000373433 LRIG3Q6UXM1 1119 aa12.1□□□□□ -0.47
RPRD1B-201ENST00000373433 RNF207Q6ZRF8 634 aa12.1□□□□□ -0.47
RPRD1B-201ENST00000373433 ANKRD13AQ8IZ07 590 aa12.1□□□□□ -0.47
RPRD1B-201ENST00000373433 RBM46Q8TBY0 533 aaKnown RBP12.1□□□□□ -0.47
RPRD1B-201ENST00000373433 TNFRSF25Q93038 417 aa12.1□□□□□ -0.47
RPRD1B-201ENST00000373433 RNF146Q9NTX7 359 aa12.1□□□□□ -0.47
RPRD1B-201ENST00000373433 C15orf41Q9Y2V0 281 aa12.1□□□□□ -0.47
RPRD1B-201ENST00000373433 ZNF831Q5JPB2 1677 aa12.1□□□□□ -0.47
RPRD1B-201ENST00000373433 A0A1W2PRG0 241 aa12.1□□□□□ -0.47
RPRD1B-201ENST00000373433 HGSO14964 777 aaPredicted RBP12.1□□□□□ -0.47
RPRD1B-201ENST00000373433 FLT3P36888 993 aa12.1□□□□□ -0.47
RPRD1B-201ENST00000373433 FIGNQ5HY92 759 aa12.1□□□□□ -0.47
RPRD1B-201ENST00000373433 BZW1Q7L1Q6 419 aaKnown RBP12.1□□□□□ -0.47
RPRD1B-201ENST00000373433 C3orf20Q8ND61 904 aa12.1□□□□□ -0.47
RPRD1B-201ENST00000373433 GMCL1P1Q8NEA9 526 aa12.1□□□□□ -0.47
RPRD1B-201ENST00000373433 PARD3BQ8TEW8 1205 aa12.1□□□□□ -0.47
RPRD1B-201ENST00000373433 FAM167BQ9BTA0 163 aa12.1□□□□□ -0.47
RPRD1B-201ENST00000373433 CCDC113Q9H0I3 377 aa12.1□□□□□ -0.47
RPRD1B-201ENST00000373433 ISCUQ9H1K1 167 aa12.1□□□□□ -0.47
RPRD1B-201ENST00000373433 LRP5O75197 1615 aa12.1□□□□□ -0.47
RPRD1B-201ENST00000373433 DAPK3O43293 454 aa12.09□□□□□ -0.47
RPRD1B-201ENST00000373433 BACE1P56817 501 aa12.09□□□□□ -0.47
RPRD1B-201ENST00000373433 DHX9Q08211 1270 aaKnown RBP12.09□□□□□ -0.47
RPRD1B-201ENST00000373433 SLC9C1Q4G0N8 1177 aa12.09□□□□□ -0.47
RPRD1B-201ENST00000373433 LACTB2Q53H82 288 aaPredicted RBP12.09□□□□□ -0.47
RPRD1B-201ENST00000373433 NLRX1Q86UT6 975 aa12.09□□□□□ -0.47
RPRD1B-201ENST00000373433 RNF10Q8N5U6 811 aaKnown RBP12.09□□□□□ -0.47
RPRD1B-201ENST00000373433 USP38Q8NB14 1042 aa12.09□□□□□ -0.47
RPRD1B-201ENST00000373433 MTMR14Q8NCE2 650 aa12.09□□□□□ -0.47
RPRD1B-201ENST00000373433 ELAC2Q9BQ52 826 aaKnown RBP12.09□□□□□ -0.47
RPRD1B-201ENST00000373433 KDM4CQ9H3R0 1056 aa12.09□□□□□ -0.47
RPRD1B-201ENST00000373433 SAMD15Q9P1V8 674 aa12.09□□□□□ -0.47
RPRD1B-201ENST00000373433 DNM3Q9UQ16 869 aa12.09□□□□□ -0.47
RPRD1B-201ENST00000373433 STK38LQ9Y2H1 464 aa12.09□□□□□ -0.47
RPRD1B-201ENST00000373433 DRD4P21917 467 aa12.09□□□□□ -0.47
RPRD1B-201ENST00000373433 OSBPP22059 807 aa12.09□□□□□ -0.47
RPRD1B-201ENST00000373433 IFNAR2P48551 515 aa12.09□□□□□ -0.47
RPRD1B-201ENST00000373433 ZNF280AP59817 542 aaPredicted RBP12.09□□□□□ -0.47
RPRD1B-201ENST00000373433 RPS6KA1Q15418 735 aa12.09□□□□□ -0.47
RPRD1B-201ENST00000373433 AGAP11Q8TF27 550 aa12.09□□□□□ -0.47
RPRD1B-201ENST00000373433 TBC1D5Q92609 795 aa12.09□□□□□ -0.47
RPRD1B-201ENST00000373433 AGBL1Q96MI9 1066 aa12.09□□□□□ -0.47
RPRD1B-201ENST00000373433 TSG101Q99816 390 aa12.09□□□□□ -0.47
RPRD1B-201ENST00000373433 NEUROG2Q9H2A3 272 aa12.09□□□□□ -0.47
RPRD1B-201ENST00000373433 LTBP3Q9NS15 1303 aa12.09□□□□□ -0.47
RPRD1B-201ENST00000373433 KIF4AO95239 1232 aa12.09□□□□□ -0.47
RPRD1B-201ENST00000373433 PLCG1P19174 1290 aa12.09□□□□□ -0.47
RPRD1B-201ENST00000373433 CHADLQ6NUI6 762 aa12.09□□□□□ -0.47
RPRD1B-201ENST00000373433 P3H4Q92791 437 aa12.09□□□□□ -0.47
RPRD1B-201ENST00000373433 MKL1Q969V6 931 aa12.09□□□□□ -0.47
RPRD1B-201ENST00000373433 RMDN3Q96TC7 470 aa12.09□□□□□ -0.47
RPRD1B-201ENST00000373433 TMEM60Q9H2L4 133 aa12.09□□□□□ -0.47
RPRD1B-201ENST00000373433 NOP53Q9NZM5 478 aaKnown RBP12.09□□□□□ -0.47
RPRD1B-201ENST00000373433 ATP8A1Q9Y2Q0 1164 aa12.09□□□□□ -0.47
RPRD1B-201ENST00000373433 PPP2R3BQ9Y5P8 575 aa12.09□□□□□ -0.47
RPRD1B-201ENST00000373433 NID2Q14112 1375 aa12.09□□□□□ -0.47
RPRD1B-201ENST00000373433 POTEMA6NI47 508 aa12.08□□□□□ -0.48
RPRD1B-201ENST00000373433 MMEP08473 750 aa12.08□□□□□ -0.48
RPRD1B-201ENST00000373433 GRIK3Q13003 919 aa12.08□□□□□ -0.48
RPRD1B-201ENST00000373433 RAPGEF1Q13905 1077 aa12.08□□□□□ -0.48
RPRD1B-201ENST00000373433 ATG4CQ96DT6 458 aa12.08□□□□□ -0.48
RPRD1B-201ENST00000373433 INPP4AQ96PE3 977 aaPredicted RBP12.08□□□□□ -0.48
RPRD1B-201ENST00000373433 XPO6Q96QU8 1125 aaKnown RBP12.08□□□□□ -0.48
RPRD1B-201ENST00000373433 ZNF577Q9BSK1 485 aa12.08□□□□□ -0.48
RPRD1B-201ENST00000373433 NT5C3AQ9H0P0 336 aa12.08□□□□□ -0.48
RPRD1B-201ENST00000373433 BATF3Q9NR55 127 aa12.08□□□□□ -0.48
RPRD1B-201ENST00000373433 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.08□□□□□ -0.484e-7■□□□□ 10.7
RPRD1B-201ENST00000373433 ABCB11O95342 1321 aa12.08□□□□□ -0.48
RPRD1B-201ENST00000373433 TAL1P17542 331 aaPredicted RBP12.08□□□□□ -0.48
RPRD1B-201ENST00000373433 STAT3P40763 770 aa12.08□□□□□ -0.48
RPRD1B-201ENST00000373433 FUT2Q10981 343 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms