RNA–Protein interactions for RNA: ENST00000371781.3

LCN1-202, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-202ENST00000371781 SMIM10L2AP0DMW4 78 aa11.98□□□□□ -0.49
LCN1-202ENST00000371781 SMIM10L2BP0DMW5 78 aa11.98□□□□□ -0.49
LCN1-202ENST00000371781 PPP1R2P41236 205 aa11.98□□□□□ -0.49
LCN1-202ENST00000371781 IGBP1P78318 339 aa11.98□□□□□ -0.49
LCN1-202ENST00000371781 ADAM17P78536 824 aa11.98□□□□□ -0.49
LCN1-202ENST00000371781 LRRC63Q05C16 580 aa11.98□□□□□ -0.49
LCN1-202ENST00000371781 PPFIA1Q13136 1202 aa11.98□□□□□ -0.49
LCN1-202ENST00000371781 STIM1Q13586 685 aa11.98□□□□□ -0.49
LCN1-202ENST00000371781 MFSD10Q14728 455 aa11.98□□□□□ -0.49
LCN1-202ENST00000371781 GRIK4Q16099 956 aa11.98□□□□□ -0.49
LCN1-202ENST00000371781 KNOP1Q1ED39 458 aaKnown RBP11.98□□□□□ -0.49
LCN1-202ENST00000371781 ZNF484Q5JVG2 852 aa11.98□□□□□ -0.49
LCN1-202ENST00000371781 HAUS6Q7Z4H7 955 aa11.98□□□□□ -0.49
LCN1-202ENST00000371781 MAP4K3Q8IVH8 894 aa11.98□□□□□ -0.49
LCN1-202ENST00000371781 ZSWIM2Q8NEG5 633 aa11.98□□□□□ -0.49
LCN1-202ENST00000371781 RAET1EQ8TD07 263 aa11.98□□□□□ -0.49
LCN1-202ENST00000371781 LMBR1Q8WVP7 490 aa11.98□□□□□ -0.49
LCN1-202ENST00000371781 KIFAP3Q92845 792 aa11.98□□□□□ -0.49
LCN1-202ENST00000371781 SRRTQ9BXP5 876 aaKnown RBP11.98□□□□□ -0.49
LCN1-202ENST00000371781 GTPBP4Q9BZE4 634 aaKnown RBP11.98□□□□□ -0.49
LCN1-202ENST00000371781 XPO4Q9C0E2 1151 aaKnown RBP11.98□□□□□ -0.49
LCN1-202ENST00000371781 IFNKQ9P0W0 207 aa11.98□□□□□ -0.49
LCN1-202ENST00000371781 TRAF3IP3Q9Y228 551 aa11.98□□□□□ -0.49
LCN1-202ENST00000371781 USP20Q9Y2K6 914 aa11.98□□□□□ -0.49
LCN1-202ENST00000371781 PPME1Q9Y570 386 aa11.98□□□□□ -0.49
LCN1-202ENST00000371781 GRIN2DO15399 1336 aa11.97□□□□□ -0.49
LCN1-202ENST00000371781 TTLL13PA6NNM8 815 aa11.97□□□□□ -0.49
LCN1-202ENST00000371781 HOXD10P28358 340 aa11.97□□□□□ -0.49
LCN1-202ENST00000371781 CPT1AP50416 773 aa11.97□□□□□ -0.49
LCN1-202ENST00000371781 FXR1P51114 621 aaKnown RBP eCLIP11.97□□□□□ -0.49
LCN1-202ENST00000371781 ZNF200P98182 395 aaPredicted RBP11.97□□□□□ -0.49
LCN1-202ENST00000371781 TBC1D8BQ0IIM8 1120 aa11.97□□□□□ -0.49
LCN1-202ENST00000371781 KRT31Q15323 416 aa11.97□□□□□ -0.49
LCN1-202ENST00000371781 KIAA0753Q2KHM9 967 aa11.97□□□□□ -0.49
LCN1-202ENST00000371781 LHX8Q68G74 356 aa11.97□□□□□ -0.49
LCN1-202ENST00000371781 CDCA2Q69YH5 1023 aaPredicted RBP11.97□□□□□ -0.49
LCN1-202ENST00000371781 RUFY4Q6ZNE9 571 aa11.97□□□□□ -0.49
LCN1-202ENST00000371781 CSGALNACT2Q8N6G5 542 aa11.97□□□□□ -0.49
LCN1-202ENST00000371781 SLAIN1Q8ND83 568 aa11.97□□□□□ -0.49
LCN1-202ENST00000371781 SH3TC2Q8TF17 1288 aa11.97□□□□□ -0.49
LCN1-202ENST00000371781 SLC7A3Q8WY07 619 aa11.97□□□□□ -0.49
LCN1-202ENST00000371781 ZNF333Q96JL9 665 aa11.97□□□□□ -0.49
LCN1-202ENST00000371781 ZNF668Q96K58 619 aaPredicted RBP11.97□□□□□ -0.49
LCN1-202ENST00000371781 CNOT6LQ96LI5 555 aaKnown RBP11.97□□□□□ -0.49
LCN1-202ENST00000371781 NTPCRQ9BSD7 190 aaKnown RBP11.97□□□□□ -0.49
LCN1-202ENST00000371781 CCDC113Q9H0I3 377 aa11.97□□□□□ -0.49
LCN1-202ENST00000371781 AP5M1Q9H0R1 490 aa11.97□□□□□ -0.49
LCN1-202ENST00000371781 THAP9Q9H5L6 903 aa11.97□□□□□ -0.49
LCN1-202ENST00000371781 AGPAT3Q9NRZ7 376 aa11.97□□□□□ -0.49
LCN1-202ENST00000371781 TYW1Q9NV66 732 aaKnown RBP11.97□□□□□ -0.49
LCN1-202ENST00000371781 SETD4Q9NVD3 440 aa11.97□□□□□ -0.49
LCN1-202ENST00000371781 TAB2Q9NYJ8 693 aa11.97□□□□□ -0.49
LCN1-202ENST00000371781 LARSQ9P2J5 1176 aaKnown RBP11.97□□□□□ -0.49
LCN1-202ENST00000371781 LIMA1Q9UHB6 759 aaKnown RBP11.97□□□□□ -0.49
LCN1-202ENST00000371781 DDX20Q9UHI6 824 aaKnown RBP11.97□□□□□ -0.49
LCN1-202ENST00000371781 ZNF215Q9UL58 517 aaPredicted RBP11.97□□□□□ -0.49
LCN1-202ENST00000371781 A0A1B0GTH6 734 aa11.96□□□□□ -0.49
LCN1-202ENST00000371781 BICDL2A1A5D9 508 aa11.96□□□□□ -0.49
LCN1-202ENST00000371781 DENND3A2RUS2 1198 aa11.96□□□□□ -0.49
LCN1-202ENST00000371781 MBLAC1A4D2B0 266 aaPredicted RBP11.96□□□□□ -0.49
LCN1-202ENST00000371781 KCNJ18B7U540 433 aa11.96□□□□□ -0.49
LCN1-202ENST00000371781 ANKRD63C9JTQ0 380 aa11.96□□□□□ -0.49
LCN1-202ENST00000371781 PDXKO00764 312 aa11.96□□□□□ -0.49
LCN1-202ENST00000371781 CLIC2O15247 247 aa11.96□□□□□ -0.49
LCN1-202ENST00000371781 TEX33O43247 280 aa11.96□□□□□ -0.49
LCN1-202ENST00000371781 MYCP01106 439 aaPredicted RBP11.96□□□□□ -0.49
LCN1-202ENST00000371781 C6orf222P0C671 652 aaPredicted RBP11.96□□□□□ -0.49
LCN1-202ENST00000371781 KLRC1P26715 233 aa11.96□□□□□ -0.49
LCN1-202ENST00000371781 CST5P28325 142 aaPredicted RBP11.96□□□□□ -0.49
LCN1-202ENST00000371781 CNGA1P29973 690 aa11.96□□□□□ -0.49
LCN1-202ENST00000371781 GRK4P32298 578 aa11.96□□□□□ -0.49
LCN1-202ENST00000371781 PBX1P40424 430 aa11.96□□□□□ -0.49
LCN1-202ENST00000371781 NAMPTP43490 491 aa11.96□□□□□ -0.49
LCN1-202ENST00000371781 CASP4P49662 377 aa11.96□□□□□ -0.49
LCN1-202ENST00000371781 DMP1Q13316 513 aaPredicted RBP11.96□□□□□ -0.49
LCN1-202ENST00000371781 KCNJ12Q14500 433 aa11.96□□□□□ -0.49
LCN1-202ENST00000371781 EDRF1Q3B7T1 1238 aa11.96□□□□□ -0.49
LCN1-202ENST00000371781 TCP11X2Q5H9J9 407 aa11.96□□□□□ -0.49
LCN1-202ENST00000371781 MIIPQ5JXC2 388 aa11.96□□□□□ -0.49
LCN1-202ENST00000371781 MTHFD1LQ6UB35 978 aa11.96□□□□□ -0.49
LCN1-202ENST00000371781 CXCL17Q6UXB2 119 aa11.96□□□□□ -0.49
LCN1-202ENST00000371781 PRPF31Q8WWY3 499 aaKnown RBP11.96□□□□□ -0.49
LCN1-202ENST00000371781 CTAGE1Q96RT6 745 aa11.96□□□□□ -0.49
LCN1-202ENST00000371781 HAPLN2Q9GZV7 340 aa11.96□□□□□ -0.49
LCN1-202ENST00000371781 XPNPEP3Q9NQH7 507 aa11.96□□□□□ -0.49
LCN1-202ENST00000371781 KMT5AQ9NQR1 393 aa11.96□□□□□ -0.49
LCN1-202ENST00000371781 DMAC2Q9NW81 257 aa11.96□□□□□ -0.49
LCN1-202ENST00000371781 CCDC169A6NNP5 214 aa11.95□□□□□ -0.5
LCN1-202ENST00000371781 AKAP3O75969 853 aa11.95□□□□□ -0.5
LCN1-202ENST00000371781 NR3C1P04150 777 aa11.95□□□□□ -0.5
LCN1-202ENST00000371781 RARBP10826 455 aa11.95□□□□□ -0.5
LCN1-202ENST00000371781 ADSSP30520 456 aa11.95□□□□□ -0.5
LCN1-202ENST00000371781 COPB1P53618 953 aaKnown RBP11.95□□□□□ -0.5
LCN1-202ENST00000371781 PRMT2P55345 433 aa11.95□□□□□ -0.5
LCN1-202ENST00000371781 PLCB2Q00722 1185 aa11.95□□□□□ -0.5
LCN1-202ENST00000371781 LAMTOR4Q0VGL1 99 aa11.95□□□□□ -0.5
LCN1-202ENST00000371781 NFIL3Q16649 462 aa11.95□□□□□ -0.5
LCN1-202ENST00000371781 SLC9C1Q4G0N8 1177 aa11.95□□□□□ -0.5
LCN1-202ENST00000371781 IER5Q5VY09 327 aa11.95□□□□□ -0.5
LCN1-202ENST00000371781 EFCAB12Q6NXP0 572 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms