RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 PIK3R2O00459 728 aa13.26□□□□□ -0.29
HCFC1-202ENST00000369984 TERF2Q15554 542 aa13.26□□□□□ -0.29
HCFC1-202ENST00000369984 TJAP1Q5JTD0 557 aa13.26□□□□□ -0.29
HCFC1-202ENST00000369984 CEP78Q5JTW2 689 aa13.26□□□□□ -0.29
HCFC1-202ENST00000369984 SYDE2Q5VT97 1194 aa13.26□□□□□ -0.29
HCFC1-202ENST00000369984 ALKBH5Q6P6C2 394 aaKnown RBP13.26□□□□□ -0.29
HCFC1-202ENST00000369984 OSBPL1AQ9BXW6 950 aa13.26□□□□□ -0.29
HCFC1-202ENST00000369984 CYP4F11Q9HBI6 524 aa13.26□□□□□ -0.29
HCFC1-202ENST00000369984 WDR62O43379 1518 aa13.26□□□□□ -0.29
HCFC1-202ENST00000369984 ANKRD65E5RJM6 399 aa13.26□□□□□ -0.29
HCFC1-202ENST00000369984 hCG_1984214I3L0E3 225 aa13.26□□□□□ -0.29
HCFC1-202ENST00000369984 MYO1CO00159 1063 aa13.26□□□□□ -0.29
HCFC1-202ENST00000369984 CIAO1O76071 339 aa13.26□□□□□ -0.29
HCFC1-202ENST00000369984 POU5F1BQ06416 359 aa13.26□□□□□ -0.29
HCFC1-202ENST00000369984 RNF219Q5W0B1 726 aaPredicted RBP13.26□□□□□ -0.29
HCFC1-202ENST00000369984 C1orf228Q6PIY5 440 aa13.26□□□□□ -0.29
HCFC1-202ENST00000369984 ZNF713Q8N859 430 aaPredicted RBP13.26□□□□□ -0.29
HCFC1-202ENST00000369984 SLC26A7Q8TE54 656 aa13.26□□□□□ -0.29
HCFC1-202ENST00000369984 SARS2Q9NP81 518 aaKnown RBP13.26□□□□□ -0.29
HCFC1-202ENST00000369984 XDHP47989 1333 aa13.26□□□□□ -0.29
HCFC1-202ENST00000369984 GOLGA8IPA6NC78 632 aa13.26□□□□□ -0.29
HCFC1-202ENST00000369984 GOLGA8JA6NMD2 632 aa13.26□□□□□ -0.29
HCFC1-202ENST00000369984 GSNP06396 782 aa13.26□□□□□ -0.29
HCFC1-202ENST00000369984 PMS2P54278 862 aa13.26□□□□□ -0.29
HCFC1-202ENST00000369984 PTK2BQ14289 1009 aa13.26□□□□□ -0.29
HCFC1-202ENST00000369984 PDXDC2PQ6P474 469 aa13.26□□□□□ -0.29
HCFC1-202ENST00000369984 NLRP9Q7RTR0 991 aa13.26□□□□□ -0.29
HCFC1-202ENST00000369984 ZFYVE19Q96K21 471 aa13.26□□□□□ -0.29
HCFC1-202ENST00000369984 ABCC2Q92887 1545 aa13.26□□□□□ -0.29
HCFC1-202ENST00000369984 KCNA6P17658 529 aa13.26□□□□□ -0.29
HCFC1-202ENST00000369984 VCPP55072 806 aaKnown RBP13.26□□□□□ -0.29
HCFC1-202ENST00000369984 GFPT1Q06210 699 aaPredicted RBP13.26□□□□□ -0.29
HCFC1-202ENST00000369984 ICE2Q659A1 982 aa13.26□□□□□ -0.29
HCFC1-202ENST00000369984 USP17L2Q6R6M4 530 aa13.26□□□□□ -0.29
HCFC1-202ENST00000369984 ARMC2Q8NEN0 867 aa13.26□□□□□ -0.29
HCFC1-202ENST00000369984 VPS11Q9H270 941 aa13.26□□□□□ -0.29
HCFC1-202ENST00000369984 GSPT2Q8IYD1 628 aaKnown RBP13.26□□□□□ -0.29
HCFC1-202ENST00000369984 ABHD8Q96I13 439 aa13.26□□□□□ -0.29
HCFC1-202ENST00000369984 PIGSQ96S52 555 aa13.26□□□□□ -0.29
HCFC1-202ENST00000369984 C6orf203Q9P0P8 240 aaPredicted RBP13.26□□□□□ -0.29
HCFC1-202ENST00000369984 TTC7AQ9ULT0 858 aaPredicted RBP13.26□□□□□ -0.29
HCFC1-202ENST00000369984 PEG3Q9GZU2 1588 aa13.25□□□□□ -0.29
HCFC1-202ENST00000369984 LOC102724159A0A0B4J2E5 919 aa13.25□□□□□ -0.29
HCFC1-202ENST00000369984 USP14P54578 494 aa13.25□□□□□ -0.29
HCFC1-202ENST00000369984 AP1B1Q10567 949 aa13.25□□□□□ -0.29
HCFC1-202ENST00000369984 PWP2Q15269 919 aaKnown RBP13.25□□□□□ -0.29
HCFC1-202ENST00000369984 FAM167BQ9BTA0 163 aa13.25□□□□□ -0.29
HCFC1-202ENST00000369984 ATP7AQ04656 1500 aa13.25□□□□□ -0.29
HCFC1-202ENST00000369984 PPEF1O14829 653 aaPredicted RBP13.25□□□□□ -0.29
HCFC1-202ENST00000369984 GPS1Q13098 491 aa13.25□□□□□ -0.29
HCFC1-202ENST00000369984 RESP18Q5W5W9 173 aa13.25□□□□□ -0.29
HCFC1-202ENST00000369984 SLFN12LQ6IEE8 588 aa13.25□□□□□ -0.29
HCFC1-202ENST00000369984 LRRC8EQ6NSJ5 796 aa13.25□□□□□ -0.29
HCFC1-202ENST00000369984 EML4Q9HC35 981 aaKnown RBP13.25□□□□□ -0.29
HCFC1-202ENST00000369984 PCDHB6Q9Y5E3 794 aa13.25□□□□□ -0.29
HCFC1-202ENST00000369984 APBA3O96018 575 aa13.25□□□□□ -0.29
HCFC1-202ENST00000369984 KIF23Q02241 960 aaPredicted RBP13.25□□□□□ -0.29
HCFC1-202ENST00000369984 RNF135Q8IUD6 432 aa13.25□□□□□ -0.29
HCFC1-202ENST00000369984 TRAF3IP3Q9Y228 551 aa13.25□□□□□ -0.29
HCFC1-202ENST00000369984 NBPF26B4DH59 902 aa13.25□□□□□ -0.29
HCFC1-202ENST00000369984 PER1O15534 1290 aaPredicted RBP13.25□□□□□ -0.29
HCFC1-202ENST00000369984 ORC4O43929 436 aa13.25□□□□□ -0.29
HCFC1-202ENST00000369984 NBPF15Q8N660 670 aa13.25□□□□□ -0.29
HCFC1-202ENST00000369984 ULK4Q96C45 1275 aa13.25□□□□□ -0.29
HCFC1-202ENST00000369984 NUP85Q9BW27 656 aa13.25□□□□□ -0.29
HCFC1-202ENST00000369984 F5H423 210 aaPredicted RBP13.25□□□□□ -0.29
HCFC1-202ENST00000369984 RAD23BP54727 409 aa13.25□□□□□ -0.29
HCFC1-202ENST00000369984 BCS1LQ9Y276 419 aa13.25□□□□□ -0.29
HCFC1-202ENST00000369984 BMP3P12645 472 aa13.25□□□□□ -0.29
HCFC1-202ENST00000369984 LRRC8BQ6P9F7 803 aa13.25□□□□□ -0.29
HCFC1-202ENST00000369984 HEMGNQ9BXL5 484 aa13.25□□□□□ -0.29
HCFC1-202ENST00000369984 MAGEB5Q9BZ81 275 aa13.25□□□□□ -0.29
HCFC1-202ENST00000369984 SEL1LQ9UBV2 794 aa13.25□□□□□ -0.29
HCFC1-202ENST00000369984 CLRN2A0PK11 232 aa13.24□□□□□ -0.29
HCFC1-202ENST00000369984 CCNE1P24864 410 aa13.24□□□□□ -0.29
HCFC1-202ENST00000369984 UBE2SQ16763 222 aa13.24□□□□□ -0.29
HCFC1-202ENST00000369984 ANO4Q32M45 955 aa13.24□□□□□ -0.29
HCFC1-202ENST00000369984 LCMT1Q9UIC8 334 aa13.24□□□□□ -0.29
HCFC1-202ENST00000369984 MAP3K15Q6ZN16 1313 aa13.24□□□□□ -0.29
HCFC1-202ENST00000369984 SH2B2O14492 632 aaPredicted RBP13.24□□□□□ -0.29
HCFC1-202ENST00000369984 TMED10P49755 219 aaKnown RBP13.24□□□□□ -0.29
HCFC1-202ENST00000369984 PPHLN1Q8NEY8 458 aaKnown RBP13.24□□□□□ -0.29
HCFC1-202ENST00000369984 OR6B3Q8NGW1 331 aa13.24□□□□□ -0.29
HCFC1-202ENST00000369984 STMN3Q9NZ72 180 aa13.24□□□□□ -0.29
HCFC1-202ENST00000369984 STK25O00506 426 aa13.24□□□□□ -0.29
HCFC1-202ENST00000369984 PCCAP05165 728 aaPredicted RBP13.24□□□□□ -0.29
HCFC1-202ENST00000369984 ADD2P35612 726 aa13.24□□□□□ -0.29
HCFC1-202ENST00000369984 TLK2Q86UE8 772 aa13.24□□□□□ -0.29
HCFC1-202ENST00000369984 OSBPL9Q96SU4 736 aa13.24□□□□□ -0.29
HCFC1-202ENST00000369984 EDEM3Q9BZQ6 932 aa13.24□□□□□ -0.29
HCFC1-202ENST00000369984 PEX3P56589 373 aa13.24□□□□□ -0.29
HCFC1-202ENST00000369984 LBRQ14739 615 aaKnown RBP13.24□□□□□ -0.29
HCFC1-202ENST00000369984 DSTYKQ6XUX3 929 aa13.24□□□□□ -0.29
HCFC1-202ENST00000369984 PHF21AQ96BD5 680 aa13.24□□□□□ -0.29
HCFC1-202ENST00000369984 PPP1R36Q96LQ0 422 aa13.24□□□□□ -0.29
HCFC1-202ENST00000369984 KDM4CQ9H3R0 1056 aa13.24□□□□□ -0.29
HCFC1-202ENST00000369984 ASNSD1Q9NWL6 643 aa13.24□□□□□ -0.29
HCFC1-202ENST00000369984 ADAM22Q9P0K1 906 aa13.24□□□□□ -0.29
HCFC1-202ENST00000369984 CEP72Q9P209 647 aa13.24□□□□□ -0.29
HCFC1-202ENST00000369984 H0Y626 953 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms