RNA–Protein interactions for RNA: ENST00000369258.8

CHD1L-202, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1L, Length 2,967 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-202ENST00000369258 SKAP2O75563 359 aaPredicted RBP13.97□□□□□ -0.17
CHD1L-202ENST00000369258 UPP2O95045 317 aa13.97□□□□□ -0.17
CHD1L-202ENST00000369258 SCTRP47872 440 aa13.97□□□□□ -0.17
CHD1L-202ENST00000369258 SNX1Q13596 522 aa13.97□□□□□ -0.17
CHD1L-202ENST00000369258 EDRF1Q3B7T1 1238 aa13.97□□□□□ -0.17
CHD1L-202ENST00000369258 EPC2Q52LR7 807 aa13.97□□□□□ -0.17
CHD1L-202ENST00000369258 TCP11Q8WWU5 503 aa13.97□□□□□ -0.17
CHD1L-202ENST00000369258 TATDN2Q93075 761 aa13.97□□□□□ -0.17
CHD1L-202ENST00000369258 SGSM3Q96HU1 749 aa13.97□□□□□ -0.17
CHD1L-202ENST00000369258 PRMT1Q99873 361 aaKnown RBP13.97□□□□□ -0.17
CHD1L-202ENST00000369258 LRRC4BQ9NT99 713 aa13.97□□□□□ -0.17
CHD1L-202ENST00000369258 THRAP3Q9Y2W1 955 aaKnown RBP13.97□□□□□ -0.17
CHD1L-202ENST00000369258 L3MBTL1Q9Y468 752 aa13.97□□□□□ -0.17
CHD1L-202ENST00000369258 NAV1Q8NEY1 1877 aa13.97□□□□□ -0.17
CHD1L-202ENST00000369258 FOXN3O00409 490 aaPredicted RBP13.97□□□□□ -0.17
CHD1L-202ENST00000369258 ZNF76P36508 570 aa13.97□□□□□ -0.17
CHD1L-202ENST00000369258 ASPRV1Q53RT3 343 aa13.97□□□□□ -0.17
CHD1L-202ENST00000369258 PPP4R3CPQ6ZMV5 832 aa13.97□□□□□ -0.17
CHD1L-202ENST00000369258 CCDC50Q8IVM0 306 aa13.97□□□□□ -0.17
CHD1L-202ENST00000369258 SYCE1Q8N0S2 351 aa13.97□□□□□ -0.17
CHD1L-202ENST00000369258 ELAC2Q9BQ52 826 aaKnown RBP13.97□□□□□ -0.17
CHD1L-202ENST00000369258 SUCLA2Q9P2R7 463 aaPredicted RBP13.97□□□□□ -0.17
CHD1L-202ENST00000369258 SWAP70Q9UH65 585 aa13.97□□□□□ -0.17
CHD1L-202ENST00000369258 ODF2LQ9ULJ1 636 aa13.97□□□□□ -0.17
CHD1L-202ENST00000369258 SPATA31A5Q5VU36 1347 aa13.96□□□□□ -0.17
CHD1L-202ENST00000369258 SPATA31A7Q8IWB4 1347 aa13.96□□□□□ -0.17
CHD1L-202ENST00000369258 C5orf60A6NFR6 353 aa13.96□□□□□ -0.17
CHD1L-202ENST00000369258 MSH4O15457 936 aa13.96□□□□□ -0.17
CHD1L-202ENST00000369258 PAEPP09466 180 aa13.96□□□□□ -0.17
CHD1L-202ENST00000369258 SCP2P22307 547 aa13.96□□□□□ -0.17
CHD1L-202ENST00000369258 MESDQ14696 234 aa13.96□□□□□ -0.17
CHD1L-202ENST00000369258 ACCSLQ4AC99 568 aa13.96□□□□□ -0.17
CHD1L-202ENST00000369258 PNMA8AQ86V59 439 aaPredicted RBP13.96□□□□□ -0.17
CHD1L-202ENST00000369258 OLIG1Q8TAK6 271 aa13.96□□□□□ -0.17
CHD1L-202ENST00000369258 HVCN1Q96D96 273 aa13.96□□□□□ -0.17
CHD1L-202ENST00000369258 FMO2Q99518 471 aa13.96□□□□□ -0.17
CHD1L-202ENST00000369258 LBHD1Q9BQE6 289 aaPredicted RBP13.96□□□□□ -0.17
CHD1L-202ENST00000369258 EPB41L4BQ9H329 900 aa13.96□□□□□ -0.17
CHD1L-202ENST00000369258 DNAJC5Q9H3Z4 198 aa13.96□□□□□ -0.17
CHD1L-202ENST00000369258 AMFRQ9UKV5 643 aa13.96□□□□□ -0.17
CHD1L-202ENST00000369258 CFBP00751 764 aa13.96□□□□□ -0.17
CHD1L-202ENST00000369258 GABPAQ06546 454 aa13.96□□□□□ -0.17
CHD1L-202ENST00000369258 TRAPPC3LQ5T215 181 aa13.96□□□□□ -0.17
CHD1L-202ENST00000369258 KIF2BQ8N4N8 673 aa13.96□□□□□ -0.17
CHD1L-202ENST00000369258 LENG9Q96B70 501 aa13.96□□□□□ -0.17
CHD1L-202ENST00000369258 DDX23Q9BUQ8 820 aaKnown RBP13.96□□□□□ -0.17
CHD1L-202ENST00000369258 CNOT10Q9H9A5 744 aaKnown RBP13.96□□□□□ -0.17
CHD1L-202ENST00000369258 KCNMB3Q9NPA1 279 aa13.96□□□□□ -0.17
CHD1L-202ENST00000369258 GOLGA8IPA6NC78 632 aa13.95□□□□□ -0.18
CHD1L-202ENST00000369258 GOLGA8JA6NMD2 632 aa13.95□□□□□ -0.18
CHD1L-202ENST00000369258 BHMG1C9JSJ3 638 aaPredicted RBP13.95□□□□□ -0.18
CHD1L-202ENST00000369258 CLTAP09496 248 aa13.95□□□□□ -0.18
CHD1L-202ENST00000369258 ZKSCAN8Q15776 578 aaPredicted RBP13.95□□□□□ -0.18
CHD1L-202ENST00000369258 PHLDB3Q6NSJ2 640 aa13.95□□□□□ -0.18
CHD1L-202ENST00000369258 CDC42EP5Q6NZY7 148 aa13.95□□□□□ -0.18
CHD1L-202ENST00000369258 TTC27Q6P3X3 843 aa13.95□□□□□ -0.18
CHD1L-202ENST00000369258 FRMD5Q7Z6J6 570 aa13.95□□□□□ -0.18
CHD1L-202ENST00000369258 TBC1D1Q86TI0 1168 aaPredicted RBP13.95□□□□□ -0.18
CHD1L-202ENST00000369258 RASGEF1CQ8N431 466 aa13.95□□□□□ -0.18
CHD1L-202ENST00000369258 CHMP6Q96FZ7 201 aa13.95□□□□□ -0.18
CHD1L-202ENST00000369258 NGLY1Q96IV0 654 aa13.95□□□□□ -0.18
CHD1L-202ENST00000369258 TACO1Q9BSH4 297 aaKnown RBP13.95□□□□□ -0.18
CHD1L-202ENST00000369258 BAIAP2L1Q9UHR4 511 aa13.95□□□□□ -0.18
CHD1L-202ENST00000369258 TPX2Q9ULW0 747 aaKnown RBP13.95□□□□□ -0.18
CHD1L-202ENST00000369258 CDK5RAP2Q96SN8 1893 aa13.95□□□□□ -0.18
CHD1L-202ENST00000369258 ACSL3O95573 720 aa13.95□□□□□ -0.18
CHD1L-202ENST00000369258 VIMP08670 466 aaKnown RBP13.95□□□□□ -0.18
CHD1L-202ENST00000369258 DRD4P21917 467 aa13.95□□□□□ -0.18
CHD1L-202ENST00000369258 DR1Q01658 176 aa13.95□□□□□ -0.18
CHD1L-202ENST00000369258 PPP1R7Q15435 360 aa13.95□□□□□ -0.18
CHD1L-202ENST00000369258 LONRF1Q17RB8 773 aa13.95□□□□□ -0.18
CHD1L-202ENST00000369258 HP1BP3Q5SSJ5 553 aaPredicted RBP13.95□□□□□ -0.18
CHD1L-202ENST00000369258 SLFN13Q68D06 897 aa13.95□□□□□ -0.18
CHD1L-202ENST00000369258 HIBCHQ6NVY1 386 aaPredicted RBP13.95□□□□□ -0.18
CHD1L-202ENST00000369258 CCDC174Q6PII3 467 aa13.95□□□□□ -0.18
CHD1L-202ENST00000369258 FAM186BQ8IYM0 893 aa13.95□□□□□ -0.18
CHD1L-202ENST00000369258 LRRC34Q8IZ02 419 aa13.95□□□□□ -0.18
CHD1L-202ENST00000369258 DYDC2Q96IM9 177 aa13.95□□□□□ -0.18
CHD1L-202ENST00000369258 XPO6Q96QU8 1125 aaKnown RBP13.95□□□□□ -0.18
CHD1L-202ENST00000369258 TBK1Q9UHD2 729 aa13.95□□□□□ -0.18
CHD1L-202ENST00000369258 MCM8Q9UJA3 840 aa13.95□□□□□ -0.18
CHD1L-202ENST00000369258 TRIM33Q9UPN9 1127 aa13.95□□□□□ -0.18
CHD1L-202ENST00000369258 ATF5Q9Y2D1 282 aaPredicted RBP13.95□□□□□ -0.18
CHD1L-202ENST00000369258 USP20Q9Y2K6 914 aa13.95□□□□□ -0.18
CHD1L-202ENST00000369258 A8MUI8 341 aa13.95□□□□□ -0.18
CHD1L-202ENST00000369258 TBCAO75347 108 aaKnown RBP13.95□□□□□ -0.18
CHD1L-202ENST00000369258 PIAS1O75925 651 aa13.95□□□□□ -0.18
CHD1L-202ENST00000369258 MMEP08473 750 aa13.95□□□□□ -0.18
CHD1L-202ENST00000369258 SNHG28P0DPA3 235 aa13.95□□□□□ -0.18
CHD1L-202ENST00000369258 EZRP15311 586 aaKnown RBP13.95□□□□□ -0.18
CHD1L-202ENST00000369258 ELF1P32519 619 aa13.95□□□□□ -0.18
CHD1L-202ENST00000369258 PRKCIP41743 596 aa13.95□□□□□ -0.18
CHD1L-202ENST00000369258 EIF3BP55884 814 aaKnown RBP13.95□□□□□ -0.18
CHD1L-202ENST00000369258 MTM1Q13496 603 aa13.95□□□□□ -0.18
CHD1L-202ENST00000369258 HYIQ5T013 277 aa13.95□□□□□ -0.18
CHD1L-202ENST00000369258 SLFN11Q7Z7L1 901 aa13.95□□□□□ -0.18
CHD1L-202ENST00000369258 HOOK3Q86VS8 718 aa13.95□□□□□ -0.18
CHD1L-202ENST00000369258 ETNPPLQ8TBG4 499 aa13.95□□□□□ -0.18
CHD1L-202ENST00000369258 N4BP2L2Q92802 583 aaPredicted RBP13.95□□□□□ -0.18
CHD1L-202ENST00000369258 EIF2AK1Q9BQI3 630 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms