RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 TMED8Q6PL24 325 aaPredicted RBP12.24□□□□□ -0.45
SPTBN1-202ENST00000356805 RASSF3Q86WH2 238 aa12.24□□□□□ -0.45
SPTBN1-202ENST00000356805 SRPK1Q96SB4 655 aaKnown RBP12.24□□□□□ -0.45
SPTBN1-202ENST00000356805 ZCWPW1Q9H0M4 648 aa12.24□□□□□ -0.45
SPTBN1-202ENST00000356805 PCDHA4Q9UN74 947 aa12.24□□□□□ -0.45
SPTBN1-202ENST00000356805 DAB2IPQ5VWQ8 1189 aa12.24□□□□□ -0.45
SPTBN1-202ENST00000356805 EPM2AIP1Q7L775 607 aaPredicted RBP12.24□□□□□ -0.45
SPTBN1-202ENST00000356805 PASD1Q8IV76 773 aa12.24□□□□□ -0.45
SPTBN1-202ENST00000356805 TMEM206Q9H813 350 aa12.24□□□□□ -0.45
SPTBN1-202ENST00000356805 POLE3Q9NRF9 147 aa12.24□□□□□ -0.45
SPTBN1-202ENST00000356805 MAN1B1Q9UKM7 699 aa12.24□□□□□ -0.45
SPTBN1-202ENST00000356805 GGPS1O95749 300 aa12.24□□□□□ -0.45
SPTBN1-202ENST00000356805 ACTN3Q08043 901 aaPredicted RBP12.24□□□□□ -0.45
SPTBN1-202ENST00000356805 PIDD1Q9HB75 910 aa12.24□□□□□ -0.45
SPTBN1-202ENST00000356805 PPARGC1AQ9UBK2 798 aaKnown RBP12.24□□□□□ -0.45
SPTBN1-202ENST00000356805 COPG1Q9Y678 874 aaKnown RBP12.24□□□□□ -0.45
SPTBN1-202ENST00000356805 A0A0D9SFI3 127 aa12.24□□□□□ -0.45
SPTBN1-202ENST00000356805 GOLGA8IPA6NC78 632 aa12.24□□□□□ -0.45
SPTBN1-202ENST00000356805 FAM187AA6NFU0 413 aa12.24□□□□□ -0.45
SPTBN1-202ENST00000356805 GOLGA8JA6NMD2 632 aa12.24□□□□□ -0.45
SPTBN1-202ENST00000356805 TJP3O95049 919 aa12.24□□□□□ -0.45
SPTBN1-202ENST00000356805 PPP1R36Q96LQ0 422 aa12.24□□□□□ -0.45
SPTBN1-202ENST00000356805 FAM49AQ9H0Q0 323 aaPredicted RBP12.24□□□□□ -0.45
SPTBN1-202ENST00000356805 DPYSL4O14531 572 aa12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 ORC4O43929 436 aa12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 ZNF189O75820 626 aaPredicted RBP12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 VCAM1P19320 739 aa12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 BZW1Q7L1Q6 419 aaKnown RBP12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 VPS39Q96JC1 886 aa12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 EGFL8Q99944 293 aa12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 MXD3Q9BW11 206 aa12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 ARHGEF10O15013 1369 aa12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 ACADSP16219 412 aa12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 COPS2P61201 443 aa12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 MAGOHP61326 146 aaKnown RBP12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 MED21Q13503 144 aa12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 KIAA2013Q8IYS2 634 aa12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 ECT2Q9H8V3 914 aa12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 GIMAP4Q9NUV9 329 aa12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 SELENONQ9NZV5 590 aa12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 MAP3K19Q56UN5 1328 aa12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 DAB1O75553 588 aa12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 KRT8P05787 483 aa12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 HSPA1AP0DMV8 641 aaKnown RBP12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 HSPA1BP0DMV9 641 aaKnown RBP12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 EIF4A3P38919 411 aaKnown RBP12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 ASPRV1Q53RT3 343 aa12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 PDXDC2PQ6P474 469 aa12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 MTBPQ96DY7 904 aa12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 HPS4Q9NQG7 708 aa12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 IL1RAPL1Q9NZN1 696 aa12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 TRAF3IP3Q9Y228 551 aa12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 ZNF711Q9Y462 761 aa12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 EFTUD2Q15029 972 aaKnown RBP eCLIP12.23□□□□□ -0.453e-6■■■□□ 18.9
SPTBN1-202ENST00000356805 RRM2BQ7LG56 351 aa12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 PROM2Q8N271 834 aa12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 ABHD10Q9NUJ1 306 aa12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 SRPRBQ9Y5M8 271 aaKnown RBP12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 NSUN7Q8NE18 718 aaKnown RBP12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 HIC2Q96JB3 615 aa12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 MSTO1Q9BUK6 570 aa12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 NDFIP2Q9NV92 336 aa12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 CLASP1Q7Z460 1538 aa12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 RASA4BC9J798 803 aa12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 RASA4O43374 803 aa12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 KRT14P02533 472 aa12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 SNAP25P60880 206 aa12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 THEMIS2Q5TEJ8 643 aa12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 OR9Q1Q8NGQ5 310 aa12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 TTC8Q8TAM2 541 aa12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 PHF21AQ96BD5 680 aa12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 CARD14Q9BXL6 1004 aa12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 DBNLQ9UJU6 430 aaKnown RBP12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 H0Y3Z8 333 aa12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 DIAPH2O60879 1101 aa12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 FGAP02671 866 aa12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 TRPC1P48995 793 aa12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 MRPS25P82663 173 aaKnown RBP12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 CHRNDQ07001 517 aa12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 PLEKHM3Q6ZWE6 761 aa12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 MIGA2Q7L4E1 593 aa12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 SGSM3Q96HU1 749 aa12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 PARVGQ9HBI0 331 aa12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 NGRNQ9NPE2 291 aaKnown RBP12.23□□□□□ -0.45
SPTBN1-202ENST00000356805 PSAPP07602 524 aa12.22□□□□□ -0.45
SPTBN1-202ENST00000356805 MRPS15P82914 257 aaKnown RBP12.22□□□□□ -0.45
SPTBN1-202ENST00000356805 PTH1RQ03431 593 aa12.22□□□□□ -0.45
SPTBN1-202ENST00000356805 CEP55Q53EZ4 464 aa12.22□□□□□ -0.45
SPTBN1-202ENST00000356805 EHD2Q9NZN4 543 aa12.22□□□□□ -0.45
SPTBN1-202ENST00000356805 SEL1LQ9UBV2 794 aa12.22□□□□□ -0.45
SPTBN1-202ENST00000356805 COPEO14579 308 aa12.22□□□□□ -0.45
SPTBN1-202ENST00000356805 MDH1P40925 334 aaKnown RBP12.22□□□□□ -0.45
SPTBN1-202ENST00000356805 ADRM1Q16186 407 aa12.22□□□□□ -0.45
SPTBN1-202ENST00000356805 DNAL1Q4LDG9 190 aa12.22□□□□□ -0.45
SPTBN1-202ENST00000356805 ERICH1Q86X53 443 aa12.22□□□□□ -0.45
SPTBN1-202ENST00000356805 GDAQ9Y2T3 454 aa12.22□□□□□ -0.45
SPTBN1-202ENST00000356805 DENND3A2RUS2 1198 aa12.22□□□□□ -0.45
SPTBN1-202ENST00000356805 SERPIND1P05546 499 aa12.22□□□□□ -0.45
SPTBN1-202ENST00000356805 GRIN1Q05586 938 aa12.22□□□□□ -0.45
SPTBN1-202ENST00000356805 STX19Q8N4C7 294 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms