RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 ARSHQ5FYA8 562 aa17.69■□□□□ 0.42
FDPS-201ENST00000356657 TSHZ1Q6ZSZ6 1077 aa17.69■□□□□ 0.42
FDPS-201ENST00000356657 SRGAP1Q7Z6B7 1085 aa17.69■□□□□ 0.42
FDPS-201ENST00000356657 FMR1NBQ8N0W7 255 aaPredicted RBP17.69■□□□□ 0.42
FDPS-201ENST00000356657 CNNM3Q8NE01 707 aa17.69■□□□□ 0.42
FDPS-201ENST00000356657 DDX12PQ92771 950 aa17.69■□□□□ 0.42
FDPS-201ENST00000356657 KCNN1Q92952 543 aa17.69■□□□□ 0.42
FDPS-201ENST00000356657 REEP2Q9BRK0 252 aa17.69■□□□□ 0.42
FDPS-201ENST00000356657 TRIM9Q9C026 710 aa17.69■□□□□ 0.42
FDPS-201ENST00000356657 ADAMTS10Q9H324 1103 aa17.69■□□□□ 0.42
FDPS-201ENST00000356657 GOLPH3LQ9H4A5 285 aa17.69■□□□□ 0.42
FDPS-201ENST00000356657 PARVGQ9HBI0 331 aa17.69■□□□□ 0.42
FDPS-201ENST00000356657 KINO60870 393 aaKnown RBP17.69■□□□□ 0.42
FDPS-201ENST00000356657 PRPF40AO75400 957 aaKnown RBP17.69■□□□□ 0.42
FDPS-201ENST00000356657 PLS3P13797 630 aa17.69■□□□□ 0.42
FDPS-201ENST00000356657 GAP43P17677 238 aa17.69■□□□□ 0.42
FDPS-201ENST00000356657 SFPQP23246 707 aaKnown RBP eCLIP17.69■□□□□ 0.42
FDPS-201ENST00000356657 GLRA2P23416 452 aa17.69■□□□□ 0.42
FDPS-201ENST00000356657 EFNA5P52803 228 aa17.69■□□□□ 0.42
FDPS-201ENST00000356657 DHX8Q14562 1220 aaKnown RBP17.69■□□□□ 0.42
FDPS-201ENST00000356657 KIZQ2M2Z5 673 aa17.69■□□□□ 0.42
FDPS-201ENST00000356657 FBXO47Q5MNV8 452 aa17.69■□□□□ 0.42
FDPS-201ENST00000356657 KRBA2Q6ZNG9 492 aa17.69■□□□□ 0.42
FDPS-201ENST00000356657 ZBTB8OSQ8IWT0 167 aa17.69■□□□□ 0.42
FDPS-201ENST00000356657 RNF149Q8NC42 400 aa17.69■□□□□ 0.42
FDPS-201ENST00000356657 ENGASEQ8NFI3 743 aa17.69■□□□□ 0.42
FDPS-201ENST00000356657 SPIRE2Q8WWL2 714 aa17.69■□□□□ 0.42
FDPS-201ENST00000356657 NLRP4Q96MN2 994 aa17.69■□□□□ 0.42
FDPS-201ENST00000356657 C7orf25Q9BPX7 421 aa17.69■□□□□ 0.42
FDPS-201ENST00000356657 NTPCRQ9BSD7 190 aaKnown RBP17.69■□□□□ 0.42
FDPS-201ENST00000356657 PCDH10Q9P2E7 1040 aa17.69■□□□□ 0.42
FDPS-201ENST00000356657 UMODL1Q5DID0 1318 aa17.68■□□□□ 0.42
FDPS-201ENST00000356657 SCN5AQ14524 2016 aa17.68■□□□□ 0.42
FDPS-201ENST00000356657 GPR182O15218 404 aa17.68■□□□□ 0.42
FDPS-201ENST00000356657 EFCAB14O75071 495 aa17.68■□□□□ 0.42
FDPS-201ENST00000356657 FAM13AO94988 1023 aa17.68■□□□□ 0.42
FDPS-201ENST00000356657 DARSP14868 501 aaKnown RBP17.68■□□□□ 0.42
FDPS-201ENST00000356657 PTMSP20962 102 aa17.68■□□□□ 0.42
FDPS-201ENST00000356657 CCL23P55773 120 aa17.68■□□□□ 0.42
FDPS-201ENST00000356657 PTENP60484 403 aa17.68■□□□□ 0.42
FDPS-201ENST00000356657 MDM2Q00987 491 aaPredicted RBP17.68■□□□□ 0.42
FDPS-201ENST00000356657 TMEM62Q0P6H9 643 aa17.68■□□□□ 0.42
FDPS-201ENST00000356657 MAPK7Q13164 816 aa17.68■□□□□ 0.42
FDPS-201ENST00000356657 SNW1Q13573 536 aaKnown RBP17.68■□□□□ 0.42
FDPS-201ENST00000356657 GIT2Q14161 759 aa17.68■□□□□ 0.42
FDPS-201ENST00000356657 CDCA2Q69YH5 1023 aaPredicted RBP17.68■□□□□ 0.42
FDPS-201ENST00000356657 PSRC1Q6PGN9 363 aaPredicted RBP17.68■□□□□ 0.42
FDPS-201ENST00000356657 CCDC65Q8IXS2 484 aa17.68■□□□□ 0.42
FDPS-201ENST00000356657 DAW1Q8N136 415 aa17.68■□□□□ 0.42
FDPS-201ENST00000356657 FTHL17Q9BXU8 183 aa17.68■□□□□ 0.42
FDPS-201ENST00000356657 IL23AQ9NPF7 189 aa17.68■□□□□ 0.42
FDPS-201ENST00000356657 GPRC5CQ9NQ84 441 aa17.68■□□□□ 0.42
FDPS-201ENST00000356657 TET1Q8NFU7 2136 aa17.67■□□□□ 0.42
FDPS-201ENST00000356657 FRMD3A2A2Y4 597 aa17.67■□□□□ 0.42
FDPS-201ENST00000356657 MYMKA6NI61 221 aa17.67■□□□□ 0.42
FDPS-201ENST00000356657 MAPTP10636 758 aaKnown RBP17.67■□□□□ 0.42
FDPS-201ENST00000356657 ITGB8P26012 769 aa17.67■□□□□ 0.42
FDPS-201ENST00000356657 MAGEA10P43363 369 aaPredicted RBP17.67■□□□□ 0.42
FDPS-201ENST00000356657 CAPSQ13938 189 aa17.67■□□□□ 0.42
FDPS-201ENST00000356657 LONRF3Q496Y0 759 aa17.67■□□□□ 0.42
FDPS-201ENST00000356657 MAEAQ7L5Y9 396 aa17.67■□□□□ 0.42
FDPS-201ENST00000356657 ASAP3Q8TDY4 903 aa17.67■□□□□ 0.42
FDPS-201ENST00000356657 BADQ92934 168 aa17.67■□□□□ 0.42
FDPS-201ENST00000356657 DNAJC19Q96DA6 116 aa17.67■□□□□ 0.42
FDPS-201ENST00000356657 PRIMPOLQ96LW4 560 aa17.67■□□□□ 0.42
FDPS-201ENST00000356657 OSMRQ99650 979 aa17.67■□□□□ 0.42
FDPS-201ENST00000356657 IFT122Q9HBG6 1241 aa17.67■□□□□ 0.42
FDPS-201ENST00000356657 OLFML3Q9NRN5 406 aa17.67■□□□□ 0.42
FDPS-201ENST00000356657 SERTAD1Q9UHV2 236 aa17.67■□□□□ 0.42
FDPS-201ENST00000356657 GINS2Q9Y248 185 aa17.67■□□□□ 0.42
FDPS-201ENST00000356657 A0A087WZ62 844 aa17.66■□□□□ 0.42
FDPS-201ENST00000356657 PVALEFA0A1B0GWK0 134 aa17.66■□□□□ 0.42
FDPS-201ENST00000356657 LRRIQ4A6NIV6 560 aa17.66■□□□□ 0.42
FDPS-201ENST00000356657 RPS6KA5O75582 802 aa17.66■□□□□ 0.42
FDPS-201ENST00000356657 SRGAP2CP0DJJ0 459 aa17.66■□□□□ 0.42
FDPS-201ENST00000356657 ACTN1P12814 892 aa17.66■□□□□ 0.42
FDPS-201ENST00000356657 CSF2RAP15509 400 aa17.66■□□□□ 0.42
FDPS-201ENST00000356657 PAK2Q13177 524 aa17.66■□□□□ 0.42
FDPS-201ENST00000356657 MBTPS1Q14703 1052 aa17.66■□□□□ 0.42
FDPS-201ENST00000356657 PLEKHG4Q58EX7 1191 aa17.66■□□□□ 0.42
FDPS-201ENST00000356657 CNKSR3Q6P9H4 555 aa17.66■□□□□ 0.42
FDPS-201ENST00000356657 DEPTORQ8TB45 409 aa17.66■□□□□ 0.42
FDPS-201ENST00000356657 SEPT8Q92599 483 aa17.66■□□□□ 0.42
FDPS-201ENST00000356657 SCLYQ96I15 445 aa17.66■□□□□ 0.42
FDPS-201ENST00000356657 FDXACB1Q9BRP7 624 aaPredicted RBP17.66■□□□□ 0.42
FDPS-201ENST00000356657 IFIH1Q9BYX4 1025 aaKnown RBP17.66■□□□□ 0.42
FDPS-201ENST00000356657 MTIF3Q9H2K0 278 aaKnown RBP17.66■□□□□ 0.42
FDPS-201ENST00000356657 GTPBP6O43824 516 aaPredicted RBP17.65■□□□□ 0.42
FDPS-201ENST00000356657 NBNO60934 754 aa17.65■□□□□ 0.42
FDPS-201ENST00000356657 GADD45BO75293 160 aaPredicted RBP17.65■□□□□ 0.42
FDPS-201ENST00000356657 BAIAP3O94812 1187 aa17.65■□□□□ 0.42
FDPS-201ENST00000356657 MBD3O95983 291 aa17.65■□□□□ 0.42
FDPS-201ENST00000356657 NPTX2P47972 431 aa17.65■□□□□ 0.42
FDPS-201ENST00000356657 NCBP1Q09161 790 aaKnown RBP17.65■□□□□ 0.42
FDPS-201ENST00000356657 ALCAMQ13740 583 aa17.65■□□□□ 0.42
FDPS-201ENST00000356657 LPIN1Q14693 890 aa17.65■□□□□ 0.42
FDPS-201ENST00000356657 CCDC47Q96A33 483 aaKnown RBP17.65■□□□□ 0.42
FDPS-201ENST00000356657 PAGE5Q96GU1 130 aa17.65■□□□□ 0.42
FDPS-201ENST00000356657 UBE2OQ9C0C9 1292 aaKnown RBP17.65■□□□□ 0.42
FDPS-201ENST00000356657 ST6GALNAC4Q9H4F1 302 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms