RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 RICTORQ6R327 1708 aa13.25□□□□□ -0.29
COLCA1-201ENST00000355430 TROVE2P10155 538 aaKnown RBP eCLIP13.25□□□□□ -0.29
COLCA1-201ENST00000355430 MAPK4P31152 587 aa13.25□□□□□ -0.29
COLCA1-201ENST00000355430 ZNF211Q13398 564 aaPredicted RBP13.25□□□□□ -0.29
COLCA1-201ENST00000355430 LRRC31Q6UY01 552 aa13.25□□□□□ -0.29
COLCA1-201ENST00000355430 NUDT12Q9BQG2 462 aa13.25□□□□□ -0.29
COLCA1-201ENST00000355430 DENND3A2RUS2 1198 aa13.25□□□□□ -0.29
COLCA1-201ENST00000355430 MYMKA6NI61 221 aa13.25□□□□□ -0.29
COLCA1-201ENST00000355430 STXBP3O00186 592 aa13.25□□□□□ -0.29
COLCA1-201ENST00000355430 CAPN9O14815 690 aa13.25□□□□□ -0.29
COLCA1-201ENST00000355430 SLC25A27O95847 323 aa13.25□□□□□ -0.29
COLCA1-201ENST00000355430 MARK3P27448 753 aa13.25□□□□□ -0.29
COLCA1-201ENST00000355430 HERVK_113P62684 666 aa13.25□□□□□ -0.29
COLCA1-201ENST00000355430 ORC2Q13416 577 aaPredicted RBP13.25□□□□□ -0.29
COLCA1-201ENST00000355430 MTMR1Q13613 665 aa13.25□□□□□ -0.29
COLCA1-201ENST00000355430 ZBTB33Q86T24 672 aa13.25□□□□□ -0.29
COLCA1-201ENST00000355430 TXNDC16Q9P2K2 825 aa13.25□□□□□ -0.29
COLCA1-201ENST00000355430 FBXL5Q9UKA1 691 aa13.25□□□□□ -0.29
COLCA1-201ENST00000355430 TYW5A2RUC4 315 aaKnown RBP13.25□□□□□ -0.29
COLCA1-201ENST00000355430 RASSF2P50749 326 aa13.25□□□□□ -0.29
COLCA1-201ENST00000355430 CATSPER4Q7RTX7 472 aa13.25□□□□□ -0.29
COLCA1-201ENST00000355430 GPRC5AQ8NFJ5 357 aa13.25□□□□□ -0.29
COLCA1-201ENST00000355430 NT5C1BQ96P26 610 aa13.25□□□□□ -0.29
COLCA1-201ENST00000355430 DUSP10Q9Y6W6 482 aa13.25□□□□□ -0.29
COLCA1-201ENST00000355430 NSFP46459 744 aaKnown RBP13.25□□□□□ -0.29
COLCA1-201ENST00000355430 SARSP49591 514 aaKnown RBP13.25□□□□□ -0.29
COLCA1-201ENST00000355430 SLMAPQ14BN4 828 aa13.25□□□□□ -0.29
COLCA1-201ENST00000355430 TMED2Q15363 201 aa13.25□□□□□ -0.29
COLCA1-201ENST00000355430 PPP1R18Q6NYC8 613 aa13.25□□□□□ -0.29
COLCA1-201ENST00000355430 PALM2Q8IXS6 379 aa13.25□□□□□ -0.29
COLCA1-201ENST00000355430 ACCSQ96QU6 501 aa13.25□□□□□ -0.29
COLCA1-201ENST00000355430 DNAJC7Q99615 494 aa13.25□□□□□ -0.29
COLCA1-201ENST00000355430 ZNF148Q9UQR1 794 aa13.25□□□□□ -0.29
COLCA1-201ENST00000355430 HSPA6P17066 643 aa13.24□□□□□ -0.29
COLCA1-201ENST00000355430 TBC1D22BQ9NU19 505 aa13.24□□□□□ -0.29
COLCA1-201ENST00000355430 ANAPC5Q9UJX4 755 aa13.24□□□□□ -0.29
COLCA1-201ENST00000355430 ANAPC4Q9UJX5 808 aa13.24□□□□□ -0.29
COLCA1-201ENST00000355430 RGL2O15211 777 aa13.24□□□□□ -0.29
COLCA1-201ENST00000355430 GUCY2CP25092 1073 aa13.24□□□□□ -0.29
COLCA1-201ENST00000355430 TROAPQ12815 778 aa13.24□□□□□ -0.29
COLCA1-201ENST00000355430 KNOP1Q1ED39 458 aaKnown RBP13.24□□□□□ -0.29
COLCA1-201ENST00000355430 CFAP157Q5JU67 520 aa13.24□□□□□ -0.29
COLCA1-201ENST00000355430 C6orf118Q5T5N4 469 aa13.24□□□□□ -0.29
COLCA1-201ENST00000355430 ANKRD20A3Q5VUR7 823 aa13.24□□□□□ -0.29
COLCA1-201ENST00000355430 FBXW10Q5XX13 1052 aa13.24□□□□□ -0.29
COLCA1-201ENST00000355430 CYP4F22Q6NT55 531 aa13.24□□□□□ -0.29
COLCA1-201ENST00000355430 A0A1W2PQJ5 194 aa13.24□□□□□ -0.29
COLCA1-201ENST00000355430 CSPG5O95196 566 aa13.24□□□□□ -0.29
COLCA1-201ENST00000355430 ACSL3O95573 720 aa13.24□□□□□ -0.29
COLCA1-201ENST00000355430 IL9RQ01113 521 aa13.24□□□□□ -0.29
COLCA1-201ENST00000355430 CDC42EP5Q6NZY7 148 aa13.24□□□□□ -0.29
COLCA1-201ENST00000355430 TBC1D1Q86TI0 1168 aaPredicted RBP13.24□□□□□ -0.29
COLCA1-201ENST00000355430 ADGRF4Q8IZF3 695 aa13.24□□□□□ -0.29
COLCA1-201ENST00000355430 URGCPQ8TCY9 931 aa13.24□□□□□ -0.29
COLCA1-201ENST00000355430 LRRC8CQ8TDW0 803 aa13.24□□□□□ -0.29
COLCA1-201ENST00000355430 RSAD2Q8WXG1 361 aa13.24□□□□□ -0.29
COLCA1-201ENST00000355430 N4BP2L2Q92802 583 aaPredicted RBP13.24□□□□□ -0.29
COLCA1-201ENST00000355430 KLHL29Q96CT2 875 aa13.24□□□□□ -0.29
COLCA1-201ENST00000355430 TEX13BQ9BXU2 312 aa13.24□□□□□ -0.29
COLCA1-201ENST00000355430 KIF1AQ12756 1690 aa13.24□□□□□ -0.29
COLCA1-201ENST00000355430 MYO1FO00160 1098 aa13.24□□□□□ -0.29
COLCA1-201ENST00000355430 TFRCP02786 760 aaKnown RBP13.24□□□□□ -0.29
COLCA1-201ENST00000355430 IRAK1P51617 712 aa13.24□□□□□ -0.29
COLCA1-201ENST00000355430 ADCY2Q08462 1091 aa13.24□□□□□ -0.29
COLCA1-201ENST00000355430 MUM1Q2TAK8 710 aa13.24□□□□□ -0.29
COLCA1-201ENST00000355430 WDR93Q6P2C0 686 aa13.24□□□□□ -0.29
COLCA1-201ENST00000355430 BBOF1Q8ND07 529 aa13.24□□□□□ -0.29
COLCA1-201ENST00000355430 TCRBV5S4A2TA0A5A2 114 aa13.23□□□□□ -0.29
COLCA1-201ENST00000355430 I3L4J1 428 aa13.23□□□□□ -0.29
COLCA1-201ENST00000355430 SESN3P58005 492 aa13.23□□□□□ -0.29
COLCA1-201ENST00000355430 EARS2Q5JPH6 523 aaKnown RBP13.23□□□□□ -0.29
COLCA1-201ENST00000355430 MMGT1Q8N4V1 131 aa13.23□□□□□ -0.29
COLCA1-201ENST00000355430 GABPB2Q8TAK5 448 aaPredicted RBP13.23□□□□□ -0.29
COLCA1-201ENST00000355430 ZIM3Q96PE6 472 aa13.23□□□□□ -0.29
COLCA1-201ENST00000355430 AMACRQ9UHK6 382 aa13.23□□□□□ -0.29
COLCA1-201ENST00000355430 A0A087X0B3 334 aa13.23□□□□□ -0.29
COLCA1-201ENST00000355430 KRT14P02533 472 aa13.23□□□□□ -0.29
COLCA1-201ENST00000355430 GCKP35557 465 aa13.23□□□□□ -0.29
COLCA1-201ENST00000355430 CYP2B6P20813 491 aa13.23□□□□□ -0.29
COLCA1-201ENST00000355430 IFRD2Q12894 506 aaPredicted RBP13.23□□□□□ -0.29
COLCA1-201ENST00000355430 SBK1Q52WX2 424 aa13.23□□□□□ -0.29
COLCA1-201ENST00000355430 NT5DC1Q5TFE4 455 aa13.23□□□□□ -0.29
COLCA1-201ENST00000355430 ZNF473Q8WTR7 871 aaKnown RBP13.23□□□□□ -0.29
COLCA1-201ENST00000355430 KATNAL1Q9BW62 490 aa13.23□□□□□ -0.29
COLCA1-201ENST00000355430 SPZ1Q9BXG8 430 aa13.23□□□□□ -0.29
COLCA1-201ENST00000355430 EDEM3Q9BZQ6 932 aa13.23□□□□□ -0.29
COLCA1-201ENST00000355430 SNX25Q9H3E2 840 aa13.23□□□□□ -0.29
COLCA1-201ENST00000355430 MON2Q7Z3U7 1717 aa13.23□□□□□ -0.29
COLCA1-201ENST00000355430 CARSP49589 748 aaKnown RBP13.23□□□□□ -0.29
COLCA1-201ENST00000355430 PMS2P54278 862 aa13.23□□□□□ -0.29
COLCA1-201ENST00000355430 KRT76Q01546 638 aa13.23□□□□□ -0.29
COLCA1-201ENST00000355430 ACTN3Q08043 901 aaPredicted RBP13.23□□□□□ -0.29
COLCA1-201ENST00000355430 NAALADL2Q58DX5 795 aa13.23□□□□□ -0.29
COLCA1-201ENST00000355430 SLC10A5Q5PT55 438 aa13.23□□□□□ -0.29
COLCA1-201ENST00000355430 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.23□□□□□ -0.29
COLCA1-201ENST00000355430 EPN3Q9H201 632 aa13.23□□□□□ -0.29
COLCA1-201ENST00000355430 C3P01024 1663 aa13.23□□□□□ -0.29
COLCA1-201ENST00000355430 A0A0U1RQJ8 604 aa13.22□□□□□ -0.29
COLCA1-201ENST00000355430 GOLGA8IPA6NC78 632 aa13.22□□□□□ -0.29
COLCA1-201ENST00000355430 GOLGA8JA6NMD2 632 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms