RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 SMCO2A6NFE2 343 aa9.18□□□□□ -0.94
CD44-205ENST00000352818 ASB14A6NK59 587 aa9.18□□□□□ -0.94
CD44-205ENST00000352818 BIN1O00499 593 aa9.18□□□□□ -0.94
CD44-205ENST00000352818 ZBTB5O15062 677 aa9.18□□□□□ -0.94
CD44-205ENST00000352818 OFD1O75665 1012 aa9.18□□□□□ -0.94
CD44-205ENST00000352818 MYL1P05976 194 aa9.18□□□□□ -0.94
CD44-205ENST00000352818 PROS1P07225 676 aa9.18□□□□□ -0.94
CD44-205ENST00000352818 PRR29P0C7W0 189 aa9.18□□□□□ -0.94
CD44-205ENST00000352818 SDHBP21912 280 aa9.18□□□□□ -0.94
CD44-205ENST00000352818 ERCC5P28715 1186 aaPredicted RBP9.18□□□□□ -0.94
CD44-205ENST00000352818 CPT1AP50416 773 aa9.18□□□□□ -0.94
CD44-205ENST00000352818 ADCY7P51828 1080 aa9.18□□□□□ -0.94
CD44-205ENST00000352818 GSDMDP57764 484 aa9.18□□□□□ -0.94
CD44-205ENST00000352818 DMWDQ09019 674 aa9.18□□□□□ -0.94
CD44-205ENST00000352818 IL17AQ16552 155 aa9.18□□□□□ -0.94
CD44-205ENST00000352818 INF2Q27J81 1249 aa9.18□□□□□ -0.94
CD44-205ENST00000352818 PLEKHG4Q58EX7 1191 aa9.18□□□□□ -0.94
CD44-205ENST00000352818 PDXDC2PQ6P474 469 aa9.18□□□□□ -0.94
CD44-205ENST00000352818 SYCE2Q6PIF2 218 aa9.18□□□□□ -0.94
CD44-205ENST00000352818 DTHD1Q6ZMT9 781 aa9.18□□□□□ -0.94
CD44-205ENST00000352818 USP49Q70CQ1 688 aa9.18□□□□□ -0.94
CD44-205ENST00000352818 NEK8Q86SG6 692 aa9.18□□□□□ -0.94
CD44-205ENST00000352818 REXO1Q8N1G1 1221 aaKnown RBP9.18□□□□□ -0.94
CD44-205ENST00000352818 CCDC155Q8N6L0 562 aa9.18□□□□□ -0.94
CD44-205ENST00000352818 OR6J1Q8NGC5 347 aa9.18□□□□□ -0.94
CD44-205ENST00000352818 ENOX1Q8TC92 643 aaKnown RBP9.18□□□□□ -0.94
CD44-205ENST00000352818 SPPL3Q8TCT6 385 aa9.18□□□□□ -0.94
CD44-205ENST00000352818 DMXL2Q8TDJ6 3036 aa9.18□□□□□ -0.94
CD44-205ENST00000352818 COPS5Q92905 334 aa9.18□□□□□ -0.94
CD44-205ENST00000352818 PAGE5Q96GU1 130 aa9.18□□□□□ -0.94
CD44-205ENST00000352818 EPSTI1Q96J88 318 aa9.18□□□□□ -0.94
CD44-205ENST00000352818 AK8Q96MA6 479 aa9.18□□□□□ -0.94
CD44-205ENST00000352818 WDR11Q9BZH6 1224 aa9.18□□□□□ -0.94
CD44-205ENST00000352818 HSD3B7Q9H2F3 369 aa9.18□□□□□ -0.94
CD44-205ENST00000352818 KCNF1Q9H3M0 494 aa9.18□□□□□ -0.94
CD44-205ENST00000352818 MFSD1Q9H3U5 465 aa9.18□□□□□ -0.94
CD44-205ENST00000352818 CUEDC2Q9H467 287 aa9.18□□□□□ -0.94
CD44-205ENST00000352818 JMJD4Q9H9V9 463 aa9.18□□□□□ -0.94
CD44-205ENST00000352818 VTA1Q9NP79 307 aa9.18□□□□□ -0.94
CD44-205ENST00000352818 RIC8AQ9NPQ8 531 aa9.18□□□□□ -0.94
CD44-205ENST00000352818 HOMER2Q9NSB8 354 aa9.18□□□□□ -0.94
CD44-205ENST00000352818 CDV3Q9UKY7 258 aaKnown RBP9.18□□□□□ -0.94
CD44-205ENST00000352818 MYO10Q9HD67 2058 aa9.17□□□□□ -0.94
CD44-205ENST00000352818 RALGAPA2Q2PPJ7 1873 aa9.17□□□□□ -0.94
CD44-205ENST00000352818 FRMPD2Q68DX3 1309 aaPredicted RBP9.17□□□□□ -0.94
CD44-205ENST00000352818 A0A087WWV3 80 aa9.17□□□□□ -0.94
CD44-205ENST00000352818 PER2O15055 1255 aa9.17□□□□□ -0.94
CD44-205ENST00000352818 CBFA2T2O43439 604 aa9.17□□□□□ -0.94
CD44-205ENST00000352818 ITGB1P05556 798 aa9.17□□□□□ -0.94
CD44-205ENST00000352818 OR52Z1P0C646 297 aa9.17□□□□□ -0.94
CD44-205ENST00000352818 SP9P0CG40 484 aa9.17□□□□□ -0.94
CD44-205ENST00000352818 BMP6P22004 513 aa9.17□□□□□ -0.94
CD44-205ENST00000352818 CLK2P49760 499 aaKnown RBP9.17□□□□□ -0.94
CD44-205ENST00000352818 TERF1P54274 439 aa9.17□□□□□ -0.94
CD44-205ENST00000352818 ZNF200P98182 395 aaPredicted RBP9.17□□□□□ -0.94
CD44-205ENST00000352818 DPYDQ12882 1025 aa9.17□□□□□ -0.94
CD44-205ENST00000352818 KCNC3Q14003 757 aa9.17□□□□□ -0.94
CD44-205ENST00000352818 HOMER1Q86YM7 354 aa9.17□□□□□ -0.94
CD44-205ENST00000352818 ADGRF4Q8IZF3 695 aa9.17□□□□□ -0.94
CD44-205ENST00000352818 FIBCD1Q8N539 461 aa9.17□□□□□ -0.94
CD44-205ENST00000352818 RASGRP4Q8TDF6 673 aa9.17□□□□□ -0.94
CD44-205ENST00000352818 DHX58Q96C10 678 aa9.17□□□□□ -0.94
CD44-205ENST00000352818 GMCL1Q96IK5 515 aa9.17□□□□□ -0.94
CD44-205ENST00000352818 NAP1L4Q99733 375 aaKnown RBP9.17□□□□□ -0.94
CD44-205ENST00000352818 UBA5Q9GZZ9 404 aa9.17□□□□□ -0.94
CD44-205ENST00000352818 CPVLQ9H3G5 476 aa9.17□□□□□ -0.94
CD44-205ENST00000352818 SH2D4AQ9H788 454 aa9.17□□□□□ -0.94
CD44-205ENST00000352818 ERVK-5Q9HDB9 667 aa9.17□□□□□ -0.94
CD44-205ENST00000352818 PARD6AQ9NPB6 346 aa9.17□□□□□ -0.94
CD44-205ENST00000352818 DISC1Q9NRI5 854 aa9.17□□□□□ -0.94
CD44-205ENST00000352818 FBXO40Q9UH90 709 aa9.17□□□□□ -0.94
CD44-205ENST00000352818 ANGPTL2Q9UKU9 493 aa9.17□□□□□ -0.94
CD44-205ENST00000352818 ZMIZ1Q9ULJ6 1067 aa9.17□□□□□ -0.94
CD44-205ENST00000352818 MTMR7Q9Y216 660 aa9.17□□□□□ -0.94
CD44-205ENST00000352818 NLRC5Q86WI3 1866 aa9.17□□□□□ -0.94
CD44-205ENST00000352818 CHMP4BP1P59074 171 aa9.16□□□□□ -0.94
CD44-205ENST00000352818 SHC2P98077 582 aa9.16□□□□□ -0.94
CD44-205ENST00000352818 CCDC96Q2M329 555 aa9.16□□□□□ -0.94
CD44-205ENST00000352818 BTNL9Q6UXG8 535 aa9.16□□□□□ -0.94
CD44-205ENST00000352818 CCDC186Q7Z3E2 898 aa9.16□□□□□ -0.94
CD44-205ENST00000352818 MAML2Q8IZL2 1156 aaPredicted RBP9.16□□□□□ -0.94
CD44-205ENST00000352818 PDILTQ8N807 584 aa9.16□□□□□ -0.94
CD44-205ENST00000352818 SPC24Q8NBT2 197 aa9.16□□□□□ -0.94
CD44-205ENST00000352818 KIAA1524Q8TCG1 905 aa9.16□□□□□ -0.94
CD44-205ENST00000352818 CUL5Q93034 780 aa9.16□□□□□ -0.94
CD44-205ENST00000352818 APOL5Q9BWW9 433 aa9.16□□□□□ -0.94
CD44-205ENST00000352818 IFIH1Q9BYX4 1025 aaKnown RBP9.16□□□□□ -0.94
CD44-205ENST00000352818 GTPBP4Q9BZE4 634 aaKnown RBP9.16□□□□□ -0.94
CD44-205ENST00000352818 TMEM60Q9H2L4 133 aa9.16□□□□□ -0.94
CD44-205ENST00000352818 TTC12Q9H892 705 aaPredicted RBP9.16□□□□□ -0.94
CD44-205ENST00000352818 RMND1Q9NWS8 449 aa9.16□□□□□ -0.94
CD44-205ENST00000352818 GTF2IRD1Q9UHL9 959 aa9.16□□□□□ -0.94
CD44-205ENST00000352818 IGSF10Q6WRI0 2623 aa9.15□□□□□ -0.94
CD44-205ENST00000352818 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.15□□□□□ -0.94
CD44-205ENST00000352818 PRR5-ARHGAP8B1AHC4 643 aa9.15□□□□□ -0.94
CD44-205ENST00000352818 SLC26A4O43511 780 aa9.15□□□□□ -0.94
CD44-205ENST00000352818 PPP1R11O60927 126 aaPredicted RBP9.15□□□□□ -0.94
CD44-205ENST00000352818 NDUFB10O96000 172 aa9.15□□□□□ -0.94
CD44-205ENST00000352818 GCFC2P16383 781 aaKnown RBP9.15□□□□□ -0.94
CD44-205ENST00000352818 ZNF18P17022 549 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms