RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 IGSF9Q9P2J2 1179 aa17.83■□□□□ 0.44
COPE-202ENST00000349893 WNT16Q9UBV4 365 aa17.83■□□□□ 0.44
COPE-202ENST00000349893 TPRP12270 2363 aaKnown RBP17.82■□□□□ 0.44
COPE-202ENST00000349893 CNTNAP5Q8WYK1 1306 aa17.82■□□□□ 0.44
COPE-202ENST00000349893 NAPAP54920 295 aa17.82■□□□□ 0.44
COPE-202ENST00000349893 COL9A3Q14050 684 aaPredicted RBP17.82■□□□□ 0.44
COPE-202ENST00000349893 PTPN14Q15678 1187 aa17.82■□□□□ 0.44
COPE-202ENST00000349893 SGMS1Q86VZ5 419 aa17.82■□□□□ 0.44
COPE-202ENST00000349893 CKAP2LQ8IYA6 745 aa17.82■□□□□ 0.44
COPE-202ENST00000349893 SMAP1Q8IYB5 467 aaPredicted RBP17.82■□□□□ 0.44
COPE-202ENST00000349893 RNF169Q8NCN4 708 aa17.82■□□□□ 0.44
COPE-202ENST00000349893 BCL7CQ8WUZ0 217 aaPredicted RBP17.82■□□□□ 0.44
COPE-202ENST00000349893 RHOBTB2Q9BYZ6 727 aa17.82■□□□□ 0.44
COPE-202ENST00000349893 DLL3Q9NYJ7 618 aa17.82■□□□□ 0.44
COPE-202ENST00000349893 AKT3Q9Y243 479 aa17.82■□□□□ 0.44
COPE-202ENST00000349893 hCG_1984214I3L0E3 225 aa17.81■□□□□ 0.44
COPE-202ENST00000349893 CYP3A4P08684 503 aa17.81■□□□□ 0.44
COPE-202ENST00000349893 TMOD1P28289 359 aa17.81■□□□□ 0.44
COPE-202ENST00000349893 GPC3P51654 580 aa17.81■□□□□ 0.44
COPE-202ENST00000349893 ADCY7P51828 1080 aa17.81■□□□□ 0.44
COPE-202ENST00000349893 FUT2Q10981 343 aa17.81■□□□□ 0.44
COPE-202ENST00000349893 PUM1Q14671 1186 aaKnown RBP eCLIP17.81■□□□□ 0.444e-10■■■■□ 22.6
COPE-202ENST00000349893 LETM2Q2VYF4 491 aa17.81■□□□□ 0.44
COPE-202ENST00000349893 EFCAB12Q6NXP0 572 aa17.81■□□□□ 0.44
COPE-202ENST00000349893 PLA2G4DQ86XP0 818 aa17.81■□□□□ 0.44
COPE-202ENST00000349893 ZNF713Q8N859 430 aaPredicted RBP17.81■□□□□ 0.44
COPE-202ENST00000349893 FAM167AQ96KS9 214 aa17.81■□□□□ 0.44
COPE-202ENST00000349893 VN1R3Q9BXE9 311 aa17.81■□□□□ 0.44
COPE-202ENST00000349893 GLT8D2Q9H1C3 349 aa17.81■□□□□ 0.44
COPE-202ENST00000349893 CHST12Q9NRB3 414 aa17.81■□□□□ 0.44
COPE-202ENST00000349893 TBC1D22BQ9NU19 505 aa17.81■□□□□ 0.44
COPE-202ENST00000349893 STK39Q9UEW8 545 aa17.81■□□□□ 0.44
COPE-202ENST00000349893 FBXL21Q9UKT6 434 aa17.81■□□□□ 0.44
COPE-202ENST00000349893 RBM8AQ9Y5S9 174 aaKnown RBP17.81■□□□□ 0.44
COPE-202ENST00000349893 SLC12A7Q9Y666 1083 aa17.81■□□□□ 0.44
COPE-202ENST00000349893 KRBA1A5PL33 1030 aa17.8■□□□□ 0.44
COPE-202ENST00000349893 N4BP1O75113 896 aaKnown RBP17.8■□□□□ 0.44
COPE-202ENST00000349893 ZC3H11AO75152 810 aaKnown RBP eCLIP17.8■□□□□ 0.44
COPE-202ENST00000349893 GALTP07902 379 aa17.8■□□□□ 0.44
COPE-202ENST00000349893 CA8P35219 290 aa17.8■□□□□ 0.44
COPE-202ENST00000349893 PHKA2P46019 1235 aa17.8■□□□□ 0.44
COPE-202ENST00000349893 CLCN4P51793 760 aa17.8■□□□□ 0.44
COPE-202ENST00000349893 TMEM87AQ8NBN3 555 aa17.8■□□□□ 0.44
COPE-202ENST00000349893 CMASQ8NFW8 434 aaPredicted RBP17.8■□□□□ 0.44
COPE-202ENST00000349893 NRDE2Q9H7Z3 1164 aa17.8■□□□□ 0.44
COPE-202ENST00000349893 PCDHA10Q9Y5I2 948 aa17.8■□□□□ 0.44
COPE-202ENST00000349893 ACACBO00763 2458 aa17.79■□□□□ 0.44
COPE-202ENST00000349893 NARSO43776 548 aaKnown RBP17.79■□□□□ 0.44
COPE-202ENST00000349893 LILRB3O75022 631 aa17.79■□□□□ 0.44
COPE-202ENST00000349893 PAPLNO95428 1278 aa17.79■□□□□ 0.44
COPE-202ENST00000349893 PSAPP07602 524 aa17.79■□□□□ 0.44
COPE-202ENST00000349893 ZNF76P36508 570 aa17.79■□□□□ 0.44
COPE-202ENST00000349893 KIAA2013Q8IYS2 634 aa17.79■□□□□ 0.44
COPE-202ENST00000349893 LRRC71Q8N4P6 559 aa17.79■□□□□ 0.44
COPE-202ENST00000349893 KCNG4Q8TDN1 519 aa17.79■□□□□ 0.44
COPE-202ENST00000349893 ZNF577Q9BSK1 485 aa17.79■□□□□ 0.44
COPE-202ENST00000349893 TBC1D13Q9NVG8 400 aa17.79■□□□□ 0.44
COPE-202ENST00000349893 BARHL2Q9NY43 387 aa17.79■□□□□ 0.44
COPE-202ENST00000349893 DLGAP2Q9P1A6 1054 aa17.79■□□□□ 0.44
COPE-202ENST00000349893 GPR179Q6PRD1 2367 aa17.78■□□□□ 0.44
COPE-202ENST00000349893 SMCO2A6NFE2 343 aa17.78■□□□□ 0.44
COPE-202ENST00000349893 SETQ01105 290 aaPredicted RBP17.78■□□□□ 0.44
COPE-202ENST00000349893 PHLDB3Q6NSJ2 640 aa17.78■□□□□ 0.44
COPE-202ENST00000349893 CYP26C1Q6V0L0 522 aa17.78■□□□□ 0.44
COPE-202ENST00000349893 RAB11FIP4Q86YS3 637 aa17.78■□□□□ 0.44
COPE-202ENST00000349893 KLHL5Q96PQ7 755 aa17.78■□□□□ 0.44
COPE-202ENST00000349893 EPS15L1Q9UBC2 864 aa17.78■□□□□ 0.44
COPE-202ENST00000349893 GABBR1Q9UBS5 961 aa17.78■□□□□ 0.44
COPE-202ENST00000349893 R4GN57 208 aa17.78■□□□□ 0.44
COPE-202ENST00000349893 DOCK8Q8NF50 2099 aa17.78■□□□□ 0.44
COPE-202ENST00000349893 ZNF862O60290 1169 aa17.77■□□□□ 0.44
COPE-202ENST00000349893 ZNF623O75123 536 aa17.77■□□□□ 0.44
COPE-202ENST00000349893 CNPP09543 421 aaKnown RBP17.77■□□□□ 0.44
COPE-202ENST00000349893 SKIP12755 728 aa17.77■□□□□ 0.44
COPE-202ENST00000349893 FGFR4P22455 802 aa17.77■□□□□ 0.44
COPE-202ENST00000349893 TBC1D8BQ0IIM8 1120 aa17.77■□□□□ 0.44
COPE-202ENST00000349893 ZC3H14Q6PJT7 736 aaKnown RBP17.77■□□□□ 0.44
COPE-202ENST00000349893 MICU3Q86XE3 530 aa17.77■□□□□ 0.44
COPE-202ENST00000349893 NXPE3Q969Y0 559 aa17.77■□□□□ 0.44
COPE-202ENST00000349893 EMILIN2Q9BXX0 1053 aa17.77■□□□□ 0.44
COPE-202ENST00000349893 RBM28Q9NW13 759 aaKnown RBP17.77■□□□□ 0.44
COPE-202ENST00000349893 ZFHX4Q86UP3 3567 aa17.76■□□□□ 0.43
COPE-202ENST00000349893 B4GALT3O60512 393 aa17.76■□□□□ 0.43
COPE-202ENST00000349893 OATP04181 439 aa17.76■□□□□ 0.43
COPE-202ENST00000349893 SRFP11831 508 aa17.76■□□□□ 0.43
COPE-202ENST00000349893 SLC11A1P49279 550 aa17.76■□□□□ 0.43
COPE-202ENST00000349893 CDC42EP1Q00587 391 aa17.76■□□□□ 0.43
COPE-202ENST00000349893 NONOQ15233 471 aaKnown RBP eCLIP17.76■□□□□ 0.433e-7■□□□□ 8
COPE-202ENST00000349893 NOMO2Q5JPE7 1267 aa17.76■□□□□ 0.43
COPE-202ENST00000349893 GLB1LQ6UWU2 654 aa17.76■□□□□ 0.43
COPE-202ENST00000349893 TRMT1LQ7Z2T5 733 aaKnown RBP17.76■□□□□ 0.43
COPE-202ENST00000349893 RUBCNQ92622 972 aa17.76■□□□□ 0.43
COPE-202ENST00000349893 ZNF668Q96K58 619 aaPredicted RBP17.76■□□□□ 0.43
COPE-202ENST00000349893 TBC1D17Q9HA65 648 aa17.76■□□□□ 0.43
COPE-202ENST00000349893 WDR6Q9NNW5 1121 aaKnown RBP17.76■□□□□ 0.43
COPE-202ENST00000349893 DNAJB4Q9UDY4 337 aa17.76■□□□□ 0.43
COPE-202ENST00000349893 MEIS3P2A8K0S8 358 aa17.75■□□□□ 0.43
COPE-202ENST00000349893 OFD1O75665 1012 aa17.75■□□□□ 0.43
COPE-202ENST00000349893 CFHP08603 1231 aa17.75■□□□□ 0.43
COPE-202ENST00000349893 SP9P0CG40 484 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms