RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 PPP1R2P3Q6NXS1 205 aa12.89□□□□□ -0.35
COL12A1-202ENST00000345356 C4orf33Q8N1A6 199 aa12.89□□□□□ -0.35
COL12A1-202ENST00000345356 USP38Q8NB14 1042 aa12.89□□□□□ -0.35
COL12A1-202ENST00000345356 CCT7Q99832 543 aa12.89□□□□□ -0.35
COL12A1-202ENST00000345356 EDEM3Q9BZQ6 932 aa12.89□□□□□ -0.35
COL12A1-202ENST00000345356 RAB21Q9UL25 225 aa12.89□□□□□ -0.35
COL12A1-202ENST00000345356 CA8P35219 290 aa12.89□□□□□ -0.35
COL12A1-202ENST00000345356 SLC18A3Q16572 532 aa12.89□□□□□ -0.35
COL12A1-202ENST00000345356 DPP8Q6V1X1 898 aaPredicted RBP12.89□□□□□ -0.35
COL12A1-202ENST00000345356 GLYCTKQ8IVS8 523 aa12.89□□□□□ -0.35
COL12A1-202ENST00000345356 ZBTB38Q8NAP3 1195 aaPredicted RBP12.89□□□□□ -0.35
COL12A1-202ENST00000345356 PIGSQ96S52 555 aa12.89□□□□□ -0.35
COL12A1-202ENST00000345356 TMOD4Q9NZQ9 345 aa12.89□□□□□ -0.35
COL12A1-202ENST00000345356 BCORL1Q5H9F3 1711 aa12.89□□□□□ -0.35
COL12A1-202ENST00000345356 XPO1O14980 1071 aaKnown RBP12.89□□□□□ -0.35
COL12A1-202ENST00000345356 KPNA2P52292 529 aaKnown RBP12.89□□□□□ -0.35
COL12A1-202ENST00000345356 PRAMEP78395 509 aa12.89□□□□□ -0.35
COL12A1-202ENST00000345356 NUP85Q9BW27 656 aa12.89□□□□□ -0.35
COL12A1-202ENST00000345356 GREM2Q9H772 168 aa12.89□□□□□ -0.35
COL12A1-202ENST00000345356 L3MBTL1Q9Y468 752 aa12.89□□□□□ -0.35
COL12A1-202ENST00000345356 PVALEFA0A1B0GWK0 134 aa12.89□□□□□ -0.35
COL12A1-202ENST00000345356 ORC4O43929 436 aa12.89□□□□□ -0.35
COL12A1-202ENST00000345356 TTLL12Q14166 644 aaPredicted RBP12.89□□□□□ -0.35
COL12A1-202ENST00000345356 KIF19Q2TAC6 998 aa12.89□□□□□ -0.35
COL12A1-202ENST00000345356 ATP11CQ8NB49 1132 aa12.89□□□□□ -0.35
COL12A1-202ENST00000345356 OPTNQ96CV9 577 aa12.89□□□□□ -0.35
COL12A1-202ENST00000345356 CELF4Q9BZC1 486 aaKnown RBP12.89□□□□□ -0.35
COL12A1-202ENST00000345356 WNT8AQ9H1J5 351 aa12.89□□□□□ -0.35
COL12A1-202ENST00000345356 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.89□□□□□ -0.35
COL12A1-202ENST00000345356 RGL1Q9NZL6 768 aa12.89□□□□□ -0.35
COL12A1-202ENST00000345356 NEDD4P46934 1319 aa12.88□□□□□ -0.35
COL12A1-202ENST00000345356 ZBED1O96006 694 aa12.88□□□□□ -0.35
COL12A1-202ENST00000345356 CCDC15Q0P6D6 951 aa12.88□□□□□ -0.35
COL12A1-202ENST00000345356 KYNUQ16719 465 aa12.88□□□□□ -0.35
COL12A1-202ENST00000345356 RBM41Q96IZ5 413 aaKnown RBP12.88□□□□□ -0.35
COL12A1-202ENST00000345356 CLMNQ96JQ2 1002 aa12.88□□□□□ -0.35
COL12A1-202ENST00000345356 HAO1Q9UJM8 370 aa12.88□□□□□ -0.35
COL12A1-202ENST00000345356 ATP11BQ9Y2G3 1177 aa12.88□□□□□ -0.35
COL12A1-202ENST00000345356 AATKQ6ZMQ8 1374 aa12.88□□□□□ -0.35
COL12A1-202ENST00000345356 FTLP02792 175 aaPredicted RBP12.88□□□□□ -0.35
COL12A1-202ENST00000345356 FCER1AP12319 257 aa12.88□□□□□ -0.35
COL12A1-202ENST00000345356 MORF4L2Q15014 288 aa12.88□□□□□ -0.35
COL12A1-202ENST00000345356 BRDTQ58F21 947 aaPredicted RBP12.88□□□□□ -0.35
COL12A1-202ENST00000345356 RBM43Q6ZSC3 357 aaKnown RBP12.88□□□□□ -0.35
COL12A1-202ENST00000345356 DNAJC10Q8IXB1 793 aa12.88□□□□□ -0.35
COL12A1-202ENST00000345356 CCNYQ8ND76 341 aa12.88□□□□□ -0.35
COL12A1-202ENST00000345356 NMD3Q96D46 503 aaKnown RBP12.88□□□□□ -0.35
COL12A1-202ENST00000345356 ZWILCHQ9H900 591 aa12.88□□□□□ -0.35
COL12A1-202ENST00000345356 PARVGQ9HBI0 331 aa12.88□□□□□ -0.35
COL12A1-202ENST00000345356 SSU72P8A0A1W2PR75 194 aa12.88□□□□□ -0.35
COL12A1-202ENST00000345356 PP2D1A8MPX8 630 aa12.88□□□□□ -0.35
COL12A1-202ENST00000345356 PCCAP05165 728 aaPredicted RBP12.88□□□□□ -0.35
COL12A1-202ENST00000345356 FAM200BP0CF97 657 aa12.88□□□□□ -0.35
COL12A1-202ENST00000345356 ERVK-24P63145 666 aa12.88□□□□□ -0.35
COL12A1-202ENST00000345356 SLC29A2Q14542 456 aa12.88□□□□□ -0.35
COL12A1-202ENST00000345356 STOX1Q6ZVD7 989 aa12.88□□□□□ -0.35
COL12A1-202ENST00000345356 FBXO11Q86XK2 927 aa12.88□□□□□ -0.35
COL12A1-202ENST00000345356 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.88□□□□□ -0.35
COL12A1-202ENST00000345356 FBXL13Q8NEE6 735 aa12.88□□□□□ -0.35
COL12A1-202ENST00000345356 FAM81BQ96LP2 452 aa12.88□□□□□ -0.35
COL12A1-202ENST00000345356 TMEM206Q9H813 350 aa12.88□□□□□ -0.35
COL12A1-202ENST00000345356 GID8Q9NWU2 228 aa12.88□□□□□ -0.35
COL12A1-202ENST00000345356 WDR19Q8NEZ3 1342 aa12.88□□□□□ -0.35
COL12A1-202ENST00000345356 E7ENQ6 273 aa12.88□□□□□ -0.35
COL12A1-202ENST00000345356 H3BRJ5 948 aa12.88□□□□□ -0.35
COL12A1-202ENST00000345356 UBOX5O94941 541 aa12.88□□□□□ -0.35
COL12A1-202ENST00000345356 SYF2O95926 243 aaKnown RBP12.88□□□□□ -0.35
COL12A1-202ENST00000345356 TMEM191BP0C7N4 346 aa12.88□□□□□ -0.35
COL12A1-202ENST00000345356 DYNLL1P63167 89 aaKnown RBP12.88□□□□□ -0.35
COL12A1-202ENST00000345356 DPYDQ12882 1025 aa12.88□□□□□ -0.35
COL12A1-202ENST00000345356 SWT1Q5T5J6 900 aaKnown RBP12.88□□□□□ -0.35
COL12A1-202ENST00000345356 TRIM67Q6ZTA4 783 aa12.88□□□□□ -0.35
COL12A1-202ENST00000345356 NLRX1Q86UT6 975 aa12.88□□□□□ -0.35
COL12A1-202ENST00000345356 GALNT4Q8N4A0 578 aa12.88□□□□□ -0.35
COL12A1-202ENST00000345356 RNF25Q96BH1 459 aaPredicted RBP12.88□□□□□ -0.35
COL12A1-202ENST00000345356 NSL1Q96IY1 281 aa12.88□□□□□ -0.35
COL12A1-202ENST00000345356 IL1RAPL1Q9NZN1 696 aa12.88□□□□□ -0.35
COL12A1-202ENST00000345356 NDUFA13Q9P0J0 144 aa12.88□□□□□ -0.35
COL12A1-202ENST00000345356 PRDM15P57071 1507 aaPredicted RBP12.88□□□□□ -0.35
COL12A1-202ENST00000345356 PHF2O75151 1096 aa12.88□□□□□ -0.35
COL12A1-202ENST00000345356 GHRP10912 638 aa12.88□□□□□ -0.35
COL12A1-202ENST00000345356 CACNA2D1P54289 1103 aa12.88□□□□□ -0.35
COL12A1-202ENST00000345356 PRPSAP1Q14558 356 aa12.88□□□□□ -0.35
COL12A1-202ENST00000345356 BARGINQ6ZT62 677 aa12.88□□□□□ -0.35
COL12A1-202ENST00000345356 VPS11Q9H270 941 aa12.88□□□□□ -0.35
COL12A1-202ENST00000345356 CCDC134Q9H6E4 229 aa12.88□□□□□ -0.35
COL12A1-202ENST00000345356 SYNJ2BP-COX16A0A087WUM0 186 aa12.87□□□□□ -0.35
COL12A1-202ENST00000345356 KRT4P19013 534 aa12.87□□□□□ -0.35
COL12A1-202ENST00000345356 ZNF746Q6NUN9 644 aaPredicted RBP12.87□□□□□ -0.35
COL12A1-202ENST00000345356 COA7Q96BR5 231 aa12.87□□□□□ -0.35
COL12A1-202ENST00000345356 ROPN1BQ9BZX4 212 aaPredicted RBP12.87□□□□□ -0.35
COL12A1-202ENST00000345356 ROPN1Q9HAT0 212 aaPredicted RBP12.87□□□□□ -0.35
COL12A1-202ENST00000345356 COX16Q9P0S2 106 aa12.87□□□□□ -0.35
COL12A1-202ENST00000345356 HESX1Q9UBX0 185 aa12.87□□□□□ -0.35
COL12A1-202ENST00000345356 MBD5Q9P267 1494 aa12.87□□□□□ -0.35
COL12A1-202ENST00000345356 KPNA7A9QM74 516 aa12.87□□□□□ -0.35
COL12A1-202ENST00000345356 TULP2O00295 520 aa12.87□□□□□ -0.35
COL12A1-202ENST00000345356 NR3C1P04150 777 aa12.87□□□□□ -0.35
COL12A1-202ENST00000345356 SERPINB10P48595 397 aa12.87□□□□□ -0.35
COL12A1-202ENST00000345356 DRAP1Q14919 205 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms