RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 CTNND2Q9UQB3 1225 aa16.02■□□□□ 0.16
NIPAL3-202ENST00000339255 C17orf102A2RUQ5 167 aa16.02■□□□□ 0.15
NIPAL3-202ENST00000339255 CCDC169A6NNP5 214 aa16.02■□□□□ 0.15
NIPAL3-202ENST00000339255 GOLGA6L19H0YKK7 550 aa16.02■□□□□ 0.15
NIPAL3-202ENST00000339255 DNM1LO00429 736 aa16.02■□□□□ 0.15
NIPAL3-202ENST00000339255 PPP1R37O75864 691 aa16.02■□□□□ 0.15
NIPAL3-202ENST00000339255 GLRA2P23416 452 aa16.02■□□□□ 0.15
NIPAL3-202ENST00000339255 CASP5P51878 434 aa16.02■□□□□ 0.15
NIPAL3-202ENST00000339255 EFNA5P52803 228 aa16.02■□□□□ 0.15
NIPAL3-202ENST00000339255 SOX10P56693 466 aa16.02■□□□□ 0.15
NIPAL3-202ENST00000339255 TPM4P67936 248 aa16.02■□□□□ 0.15
NIPAL3-202ENST00000339255 CDC42EP1Q00587 391 aa16.02■□□□□ 0.15
NIPAL3-202ENST00000339255 IQCB1Q15051 598 aa16.02■□□□□ 0.15
NIPAL3-202ENST00000339255 CENPPQ6IPU0 288 aa16.02■□□□□ 0.15
NIPAL3-202ENST00000339255 HAUS6Q7Z4H7 955 aa16.02■□□□□ 0.15
NIPAL3-202ENST00000339255 LRRC71Q8N4P6 559 aa16.02■□□□□ 0.15
NIPAL3-202ENST00000339255 AOPEPQ8N6M6 819 aa16.02■□□□□ 0.15
NIPAL3-202ENST00000339255 PRPF31Q8WWY3 499 aaKnown RBP16.02■□□□□ 0.15
NIPAL3-202ENST00000339255 NELFBQ8WX92 580 aa16.02■□□□□ 0.15
NIPAL3-202ENST00000339255 P2RX5Q93086 422 aa16.02■□□□□ 0.15
NIPAL3-202ENST00000339255 ZNF333Q96JL9 665 aa16.02■□□□□ 0.15
NIPAL3-202ENST00000339255 GLT1D1Q96MS3 346 aa16.02■□□□□ 0.15
NIPAL3-202ENST00000339255 STRA6Q9BX79 667 aa16.02■□□□□ 0.15
NIPAL3-202ENST00000339255 RBSNQ9H1K0 784 aa16.02■□□□□ 0.15
NIPAL3-202ENST00000339255 POLD4Q9HCU8 107 aa16.02■□□□□ 0.15
NIPAL3-202ENST00000339255 SUCLA2Q9P2R7 463 aaPredicted RBP16.02■□□□□ 0.15
NIPAL3-202ENST00000339255 MAPK8IP1Q9UQF2 711 aa16.02■□□□□ 0.15
NIPAL3-202ENST00000339255 SLC16A4O15374 487 aa16.01■□□□□ 0.15
NIPAL3-202ENST00000339255 CCNE1P24864 410 aa16.01■□□□□ 0.15
NIPAL3-202ENST00000339255 NMT1P30419 496 aaKnown RBP16.01■□□□□ 0.15
NIPAL3-202ENST00000339255 ADAM17P78536 824 aa16.01■□□□□ 0.15
NIPAL3-202ENST00000339255 GTF2BQ00403 316 aa16.01■□□□□ 0.15
NIPAL3-202ENST00000339255 PTPN11Q06124 597 aaPredicted RBP16.01■□□□□ 0.15
NIPAL3-202ENST00000339255 KNOP1Q1ED39 458 aaKnown RBP16.01■□□□□ 0.15
NIPAL3-202ENST00000339255 NBPF20Q3BBV1 942 aa16.01■□□□□ 0.15
NIPAL3-202ENST00000339255 L1TD1Q5T7N2 865 aaKnown RBP16.01■□□□□ 0.15
NIPAL3-202ENST00000339255 TAF2Q6P1X5 1199 aa16.01■□□□□ 0.15
NIPAL3-202ENST00000339255 PPP4R3CPQ6ZMV5 832 aa16.01■□□□□ 0.15
NIPAL3-202ENST00000339255 DHX40Q8IX18 779 aaKnown RBP16.01■□□□□ 0.15
NIPAL3-202ENST00000339255 RNF214Q8ND24 703 aa16.01■□□□□ 0.15
NIPAL3-202ENST00000339255 ZNF507Q8TCN5 953 aa16.01■□□□□ 0.15
NIPAL3-202ENST00000339255 BSNDQ8WZ55 320 aa16.01■□□□□ 0.15
NIPAL3-202ENST00000339255 DEFB118Q96PH6 123 aa16.01■□□□□ 0.15
NIPAL3-202ENST00000339255 TSG101Q99816 390 aa16.01■□□□□ 0.15
NIPAL3-202ENST00000339255 ARHGAP28Q9P2N2 729 aa16.01■□□□□ 0.15
NIPAL3-202ENST00000339255 GTF2IRD1Q9UHL9 959 aa16.01■□□□□ 0.15
NIPAL3-202ENST00000339255 PHF24Q9UPV7 400 aa16.01■□□□□ 0.15
NIPAL3-202ENST00000339255 KIAA0100Q14667 2235 aaKnown RBP16■□□□□ 0.15
NIPAL3-202ENST00000339255 SMIM35A0A1B0GVV1 85 aa16■□□□□ 0.15
NIPAL3-202ENST00000339255 LRRIQ4A6NIV6 560 aa16■□□□□ 0.15
NIPAL3-202ENST00000339255 MYBP10242 640 aa16■□□□□ 0.15
NIPAL3-202ENST00000339255 CAPN2P17655 700 aa16■□□□□ 0.15
NIPAL3-202ENST00000339255 POU5F1BQ06416 359 aa16■□□□□ 0.15
NIPAL3-202ENST00000339255 LAMTOR4Q0VGL1 99 aa16■□□□□ 0.15
NIPAL3-202ENST00000339255 MKRN4PQ13434 485 aaPredicted RBP16■□□□□ 0.15
NIPAL3-202ENST00000339255 MTFR1Q15390 333 aa16■□□□□ 0.15
NIPAL3-202ENST00000339255 SPATA1Q5VX52 437 aa16■□□□□ 0.15
NIPAL3-202ENST00000339255 LUZP1Q86V48 1076 aa16■□□□□ 0.15
NIPAL3-202ENST00000339255 TMEM161BQ8NDZ6 487 aa16■□□□□ 0.15
NIPAL3-202ENST00000339255 GLIS3Q8NEA6 775 aa16■□□□□ 0.15
NIPAL3-202ENST00000339255 DEPTORQ8TB45 409 aa16■□□□□ 0.15
NIPAL3-202ENST00000339255 GOLGA5Q8TBA6 731 aa16■□□□□ 0.15
NIPAL3-202ENST00000339255 ASAP3Q8TDY4 903 aa16■□□□□ 0.15
NIPAL3-202ENST00000339255 NFKBIZQ9BYH8 718 aa16■□□□□ 0.15
NIPAL3-202ENST00000339255 FGFBP2Q9BYJ0 223 aa16■□□□□ 0.15
NIPAL3-202ENST00000339255 C2orf40Q9H1Z8 148 aa16■□□□□ 0.15
NIPAL3-202ENST00000339255 TMEM206Q9H813 350 aa16■□□□□ 0.15
NIPAL3-202ENST00000339255 PRDM10Q9NQV6 1147 aa16■□□□□ 0.15
NIPAL3-202ENST00000339255 HDAC6Q9UBN7 1215 aa16■□□□□ 0.15
NIPAL3-202ENST00000339255 OGDHLQ9ULD0 1010 aa16■□□□□ 0.15
NIPAL3-202ENST00000339255 EXOC7Q9UPT5 735 aa16■□□□□ 0.15
NIPAL3-202ENST00000339255 CLCN3P51790 818 aa15.99■□□□□ 0.15
NIPAL3-202ENST00000339255 DRP2Q13474 957 aa15.99■□□□□ 0.15
NIPAL3-202ENST00000339255 CAPSQ13938 189 aa15.99■□□□□ 0.15
NIPAL3-202ENST00000339255 UVSSAQ2YD98 709 aa15.99■□□□□ 0.15
NIPAL3-202ENST00000339255 RHPN2Q8IUC4 686 aa15.99■□□□□ 0.15
NIPAL3-202ENST00000339255 ACCSQ96QU6 501 aa15.99■□□□□ 0.15
NIPAL3-202ENST00000339255 CGNQ9P2M7 1197 aaKnown RBP15.99■□□□□ 0.15
NIPAL3-202ENST00000339255 AKT3Q9Y243 479 aa15.99■□□□□ 0.15
NIPAL3-202ENST00000339255 DENND3A2RUS2 1198 aa15.99■□□□□ 0.15
NIPAL3-202ENST00000339255 PDXKO00764 312 aa15.99■□□□□ 0.15
NIPAL3-202ENST00000339255 GJB1P08034 283 aa15.99■□□□□ 0.15
NIPAL3-202ENST00000339255 PHKA2P46019 1235 aa15.99■□□□□ 0.15
NIPAL3-202ENST00000339255 MRE11P49959 708 aa15.99■□□□□ 0.15
NIPAL3-202ENST00000339255 SNRPFP62306 86 aaKnown RBP15.99■□□□□ 0.15
NIPAL3-202ENST00000339255 TPD52L1Q16890 204 aaPredicted RBP15.99■□□□□ 0.15
NIPAL3-202ENST00000339255 EDRF1Q3B7T1 1238 aa15.99■□□□□ 0.15
NIPAL3-202ENST00000339255 ZC2HC1CQ53FD0 456 aaPredicted RBP15.99■□□□□ 0.15
NIPAL3-202ENST00000339255 FAM47CQ5HY64 1035 aa15.99■□□□□ 0.15
NIPAL3-202ENST00000339255 CDCA2Q69YH5 1023 aaPredicted RBP15.99■□□□□ 0.15
NIPAL3-202ENST00000339255 TTI2Q6NXR4 508 aa15.99■□□□□ 0.15
NIPAL3-202ENST00000339255 HS2ST1Q7LGA3 356 aa15.99■□□□□ 0.15
NIPAL3-202ENST00000339255 MAP4K3Q8IVH8 894 aa15.99■□□□□ 0.15
NIPAL3-202ENST00000339255 ZBTB8OSQ8IWT0 167 aa15.99■□□□□ 0.15
NIPAL3-202ENST00000339255 KIAA0319LQ8IZA0 1049 aa15.99■□□□□ 0.15
NIPAL3-202ENST00000339255 VTI1AQ96AJ9 217 aa15.99■□□□□ 0.15
NIPAL3-202ENST00000339255 KCTD10Q9H3F6 313 aa15.99■□□□□ 0.15
NIPAL3-202ENST00000339255 GRPEL1Q9HAV7 217 aa15.99■□□□□ 0.15
NIPAL3-202ENST00000339255 TYW1Q9NV66 732 aaKnown RBP15.99■□□□□ 0.15
NIPAL3-202ENST00000339255 A0A1W2PQ45 241 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms