RNA–Protein interactions for RNA: ENST00000337908.4

MS4A4A-201, Transcript of membrane spanning 4-domains A4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MS4A4A, Length 1,604 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4A-201ENST00000337908 TLL2Q9Y6L7 1015 aa11.92□□□□□ -0.5
MS4A4A-201ENST00000337908 EMSYQ7Z589 1322 aa11.91□□□□□ -0.5
MS4A4A-201ENST00000337908 GAS2O43903 313 aaKnown RBP11.91□□□□□ -0.5
MS4A4A-201ENST00000337908 LGR5O75473 907 aa11.91□□□□□ -0.5
MS4A4A-201ENST00000337908 AKAP3O75969 853 aa11.91□□□□□ -0.5
MS4A4A-201ENST00000337908 IPO7O95373 1038 aaKnown RBP11.91□□□□□ -0.5
MS4A4A-201ENST00000337908 TUBB4AP04350 444 aa11.91□□□□□ -0.5
MS4A4A-201ENST00000337908 CCDC175P0C221 793 aa11.91□□□□□ -0.5
MS4A4A-201ENST00000337908 KCNH2Q12809 1159 aa11.91□□□□□ -0.5
MS4A4A-201ENST00000337908 MAMDC4Q6UXC1 1216 aa11.91□□□□□ -0.5
MS4A4A-201ENST00000337908 IFNL1Q8IU54 200 aa11.91□□□□□ -0.5
MS4A4A-201ENST00000337908 C16orf45Q96MC5 204 aaPredicted RBP11.91□□□□□ -0.5
MS4A4A-201ENST00000337908 LSM14BQ9BX40 385 aaKnown RBP11.91□□□□□ -0.5
MS4A4A-201ENST00000337908 EDEM3Q9BZQ6 932 aa11.91□□□□□ -0.5
MS4A4A-201ENST00000337908 NUCKS1Q9H1E3 243 aaKnown RBP11.91□□□□□ -0.5
MS4A4A-201ENST00000337908 FAM207AQ9NSI2 230 aaPredicted RBP11.91□□□□□ -0.5
MS4A4A-201ENST00000337908 TBX20Q9UMR3 447 aa11.91□□□□□ -0.5
MS4A4A-201ENST00000337908 TRPC6Q9Y210 931 aa11.91□□□□□ -0.5
MS4A4A-201ENST00000337908 PASKQ96RG2 1323 aa11.91□□□□□ -0.5
MS4A4A-201ENST00000337908 IGF2BP3O00425 579 aaKnown RBP eCLIP11.9□□□□□ -0.5
MS4A4A-201ENST00000337908 NKRFO15226 690 aaKnown RBP eCLIP11.9□□□□□ -0.5
MS4A4A-201ENST00000337908 TNNT1P13805 278 aa11.9□□□□□ -0.5
MS4A4A-201ENST00000337908 MARK3P27448 753 aa11.9□□□□□ -0.5
MS4A4A-201ENST00000337908 E4F1Q66K89 784 aaPredicted RBP11.9□□□□□ -0.5
MS4A4A-201ENST00000337908 TMEM139Q8IV31 216 aa11.9□□□□□ -0.5
MS4A4A-201ENST00000337908 C12orf56Q8IXR9 622 aa11.9□□□□□ -0.5
MS4A4A-201ENST00000337908 TMEM161BQ8NDZ6 487 aa11.9□□□□□ -0.5
MS4A4A-201ENST00000337908 ATP8B4Q8TF62 1192 aa11.9□□□□□ -0.5
MS4A4A-201ENST00000337908 MAML3Q96JK9 1138 aa11.9□□□□□ -0.5
MS4A4A-201ENST00000337908 PCYT2Q99447 389 aa11.9□□□□□ -0.5
MS4A4A-201ENST00000337908 ABHD16BQ9H3Z7 469 aa11.9□□□□□ -0.5
MS4A4A-201ENST00000337908 DHX33Q9H6R0 707 aaKnown RBP11.9□□□□□ -0.5
MS4A4A-201ENST00000337908 PDGFCQ9NRA1 345 aa11.9□□□□□ -0.5
MS4A4A-201ENST00000337908 ZHX1Q9UKY1 873 aaPredicted RBP11.9□□□□□ -0.5
MS4A4A-201ENST00000337908 SIK3Q9Y2K2 1263 aa11.9□□□□□ -0.5
MS4A4A-201ENST00000337908 RBM47A0AV96 593 aaKnown RBP11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 LRRIQ4A6NIV6 560 aa11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 HBP1O60381 514 aa11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 N4BP1O75113 896 aaKnown RBP11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 ATP4AP20648 1035 aa11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 CYLC1P35663 651 aaPredicted RBP11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 NAMPTP43490 491 aa11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 CASP4P49662 377 aa11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 KLK7P49862 253 aa11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 CETN1Q12798 172 aa11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 MAP2K5Q13163 448 aa11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 HSDL1Q3SXM5 330 aa11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 IER5Q5VY09 327 aa11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 GBP6Q6ZN66 633 aa11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 INTS8Q75QN2 995 aaKnown RBP11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 USP37Q86T82 979 aa11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 MAP4K3Q8IVH8 894 aa11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 XXYLT1Q8NBI6 393 aa11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 COPS5Q92905 334 aa11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 TMEM143Q96AN5 459 aa11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 PPP1R13BQ96KQ4 1090 aa11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 DNAJC7Q99615 494 aa11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 NTPCRQ9BSD7 190 aaKnown RBP11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 TINF2Q9BSI4 451 aa11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 XPNPEP1Q9NQW7 623 aa11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 PDLIM7Q9NR12 457 aa11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 DMAC2Q9NW81 257 aa11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 ERAP1Q9NZ08 941 aa11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 CEP72Q9P209 647 aa11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 ZNF215Q9UL58 517 aaPredicted RBP11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 PPP2R2CQ9Y2T4 447 aa11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 PHLPP2Q6ZVD8 1323 aa11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 ADGRA2Q96PE1 1338 aa11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 SOWAHDA6NJG2 315 aa11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 HNRNPDLO14979 420 aaKnown RBP11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 TLR2O60603 784 aa11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 MAFO75444 373 aaPredicted RBP11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 FECHP22830 423 aa11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 RGS2P41220 211 aa11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 LIG4P49917 911 aa11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 SOX10P56693 466 aa11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 EXOC3L4Q17RC7 722 aa11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 IQSEC1Q6DN90 963 aa11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 TAPT1Q6NXT6 567 aa11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 ZBTB8OSQ8IWT0 167 aa11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 OR6J1Q8NGC5 347 aa11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 SOCS4Q8WXH5 440 aa11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 BSNDQ8WZ55 320 aa11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 PCIF1Q9H4Z3 704 aa11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 HSPBP1Q9NZL4 362 aa11.89□□□□□ -0.51
MS4A4A-201ENST00000337908 GTPBP10A4D1E9 387 aaKnown RBP11.88□□□□□ -0.51
MS4A4A-201ENST00000337908 TMEM88BA6NKF7 163 aa11.88□□□□□ -0.51
MS4A4A-201ENST00000337908 USP27XA6NNY8 438 aa11.88□□□□□ -0.51
MS4A4A-201ENST00000337908 TULP1O00294 542 aaPredicted RBP11.88□□□□□ -0.51
MS4A4A-201ENST00000337908 MAPK13O15264 365 aa11.88□□□□□ -0.51
MS4A4A-201ENST00000337908 SNAI1O95863 264 aaPredicted RBP11.88□□□□□ -0.51
MS4A4A-201ENST00000337908 ARL2P36404 184 aa11.88□□□□□ -0.51
MS4A4A-201ENST00000337908 ADCYAP1R1P41586 468 aa11.88□□□□□ -0.51
MS4A4A-201ENST00000337908 MATR3P43243 847 aaKnown RBP eCLIP11.88□□□□□ -0.51
MS4A4A-201ENST00000337908 ARHGAP1Q07960 439 aa11.88□□□□□ -0.51
MS4A4A-201ENST00000337908 BFSP1Q12934 665 aa11.88□□□□□ -0.51
MS4A4A-201ENST00000337908 GRM1Q13255 1194 aa11.88□□□□□ -0.51
MS4A4A-201ENST00000337908 ACVR2BQ13705 512 aa11.88□□□□□ -0.51
MS4A4A-201ENST00000337908 TFDP1Q14186 410 aa11.88□□□□□ -0.51
MS4A4A-201ENST00000337908 MXD4Q14582 209 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms