RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 FMO2Q99518 471 aa21.52■■□□□ 1.04
CRLF3-201ENST00000324238 WDR18Q9BV38 432 aa21.52■■□□□ 1.04
CRLF3-201ENST00000324238 FOXO6A8MYZ6 492 aa21.52■■□□□ 1.04
CRLF3-201ENST00000324238 SLITRK3O94933 977 aa21.52■■□□□ 1.04
CRLF3-201ENST00000324238 PHLDB3Q6NSJ2 640 aa21.52■■□□□ 1.04
CRLF3-201ENST00000324238 CCDC121Q6ZUS5 278 aa21.52■■□□□ 1.04
CRLF3-201ENST00000324238 CPLX4Q7Z7G2 160 aa21.52■■□□□ 1.04
CRLF3-201ENST00000324238 CDAN1Q8IWY9 1227 aa21.52■■□□□ 1.04
CRLF3-201ENST00000324238 FBXO25Q8TCJ0 367 aa21.52■■□□□ 1.04
CRLF3-201ENST00000324238 LMBR1Q8WVP7 490 aa21.52■■□□□ 1.04
CRLF3-201ENST00000324238 PRMT6Q96LA8 375 aaPredicted RBP21.52■■□□□ 1.04
CRLF3-201ENST00000324238 MTFR1LQ9H019 292 aa21.52■■□□□ 1.04
CRLF3-201ENST00000324238 CCDC113Q9H0I3 377 aa21.52■■□□□ 1.04
CRLF3-201ENST00000324238 DDX3YO15523 660 aaKnown RBP21.51■■□□□ 1.03
CRLF3-201ENST00000324238 IFI35P80217 286 aaPredicted RBP21.51■■□□□ 1.03
CRLF3-201ENST00000324238 DR1Q01658 176 aa21.51■■□□□ 1.03
CRLF3-201ENST00000324238 MIGA2Q7L4E1 593 aa21.51■■□□□ 1.03
CRLF3-201ENST00000324238 SEC16BQ96JE7 1060 aa21.51■■□□□ 1.03
CRLF3-201ENST00000324238 CSRNP1Q96S65 589 aa21.51■■□□□ 1.03
CRLF3-201ENST00000324238 GPR88Q9GZN0 384 aa21.51■■□□□ 1.03
CRLF3-201ENST00000324238 TCRBV7S2A1N4TA0A589 114 aa21.51■■□□□ 1.03
CRLF3-201ENST00000324238 BTNL10A8MVZ5 291 aa21.51■■□□□ 1.03
CRLF3-201ENST00000324238 TRAPPC3O43617 180 aa21.51■■□□□ 1.03
CRLF3-201ENST00000324238 PSMC2P35998 433 aaKnown RBP21.51■■□□□ 1.03
CRLF3-201ENST00000324238 KIAA1755Q5JYT7 1200 aa21.51■■□□□ 1.03
CRLF3-201ENST00000324238 GGT7Q9UJ14 662 aa21.51■■□□□ 1.03
CRLF3-201ENST00000324238 NENFQ9UMX5 172 aa21.51■■□□□ 1.03
CRLF3-201ENST00000324238 LTBP4Q8N2S1 1624 aa21.51■■□□□ 1.03
CRLF3-201ENST00000324238 ECE2O60344 883 aa21.51■■□□□ 1.03
CRLF3-201ENST00000324238 CALCAP01258 141 aa21.51■■□□□ 1.03
CRLF3-201ENST00000324238 FERP16591 822 aa21.51■■□□□ 1.03
CRLF3-201ENST00000324238 KCNJ1P48048 391 aa21.51■■□□□ 1.03
CRLF3-201ENST00000324238 IFNAR2P48551 515 aa21.51■■□□□ 1.03
CRLF3-201ENST00000324238 ODR4Q5SWX8 454 aa21.51■■□□□ 1.03
CRLF3-201ENST00000324238 MICALCLQ6ZW33 695 aa21.51■■□□□ 1.03
CRLF3-201ENST00000324238 SLC30A5Q8TAD4 765 aa21.51■■□□□ 1.03
CRLF3-201ENST00000324238 BORCS6Q96GS4 357 aa21.51■■□□□ 1.03
CRLF3-201ENST00000324238 FAM84AQ96KN4 292 aa21.51■■□□□ 1.03
CRLF3-201ENST00000324238 INTS2Q9H0H0 1204 aaKnown RBP21.51■■□□□ 1.03
CRLF3-201ENST00000324238 METTL14Q9HCE5 456 aaKnown RBP21.51■■□□□ 1.03
CRLF3-201ENST00000324238 HAUS2Q9NVX0 235 aa21.51■■□□□ 1.03
CRLF3-201ENST00000324238 ZBTB21Q9ULJ3 1066 aa21.51■■□□□ 1.03
CRLF3-201ENST00000324238 SYDE2Q5VT97 1194 aa21.5■■□□□ 1.03
CRLF3-201ENST00000324238 LRIG3Q6UXM1 1119 aa21.5■■□□□ 1.03
CRLF3-201ENST00000324238 RUFY4Q6ZNE9 571 aa21.5■■□□□ 1.03
CRLF3-201ENST00000324238 ZDHHC14Q8IZN3 488 aa21.5■■□□□ 1.03
CRLF3-201ENST00000324238 SYCP3Q8IZU3 236 aa21.5■■□□□ 1.03
CRLF3-201ENST00000324238 RASGEF1CQ8N431 466 aa21.5■■□□□ 1.03
CRLF3-201ENST00000324238 CALR3Q96L12 384 aaKnown RBP21.5■■□□□ 1.03
CRLF3-201ENST00000324238 MBOAT7Q96N66 472 aa21.5■■□□□ 1.03
CRLF3-201ENST00000324238 CTTNBP2NLQ9P2B4 639 aa21.5■■□□□ 1.03
CRLF3-201ENST00000324238 EXOC3O60645 756 aa21.5■■□□□ 1.03
CRLF3-201ENST00000324238 EYA4O95677 639 aa21.5■■□□□ 1.03
CRLF3-201ENST00000324238 NPR1P16066 1061 aa21.5■■□□□ 1.03
CRLF3-201ENST00000324238 POU5F1Q01860 360 aaKnown RBP21.5■■□□□ 1.03
CRLF3-201ENST00000324238 LRCH2Q5VUJ6 765 aa21.5■■□□□ 1.03
CRLF3-201ENST00000324238 HHIPL2Q6UWX4 724 aa21.5■■□□□ 1.03
CRLF3-201ENST00000324238 PHLDB2Q86SQ0 1253 aa21.5■■□□□ 1.03
CRLF3-201ENST00000324238 CCDC25Q86WR0 208 aa21.5■■□□□ 1.03
CRLF3-201ENST00000324238 SUGP1Q8IWZ8 645 aaKnown RBP21.5■■□□□ 1.03
CRLF3-201ENST00000324238 FAM178BQ8IXR5 827 aa21.5■■□□□ 1.03
CRLF3-201ENST00000324238 ARFGAP2Q8N6H7 521 aa21.5■■□□□ 1.03
CRLF3-201ENST00000324238 POP1Q99575 1024 aaKnown RBP21.5■■□□□ 1.03
CRLF3-201ENST00000324238 CCDC188H7C350 402 aa21.49■■□□□ 1.03
CRLF3-201ENST00000324238 FSBPO95073 299 aa21.49■■□□□ 1.03
CRLF3-201ENST00000324238 FGFR4P22455 802 aa21.49■■□□□ 1.03
CRLF3-201ENST00000324238 BYSLQ13895 437 aaKnown RBP21.49■■□□□ 1.03
CRLF3-201ENST00000324238 MESDQ14696 234 aa21.49■■□□□ 1.03
CRLF3-201ENST00000324238 CCDC17Q96LX7 622 aa21.49■■□□□ 1.03
CRLF3-201ENST00000324238 SEMA4AQ9H3S1 761 aa21.49■■□□□ 1.03
CRLF3-201ENST00000324238 UBE2TQ9NPD8 197 aaPredicted RBP21.49■■□□□ 1.03
CRLF3-201ENST00000324238 DNAJC17Q9NVM6 304 aaKnown RBP21.49■■□□□ 1.03
CRLF3-201ENST00000324238 DAAM1Q9Y4D1 1078 aa21.49■■□□□ 1.03
CRLF3-201ENST00000324238 NHSQ6T4R5 1651 aa21.49■■□□□ 1.03
CRLF3-201ENST00000324238 LOC102724159A0A0B4J2E5 919 aa21.49■■□□□ 1.03
CRLF3-201ENST00000324238 CTNND1O60716 968 aaKnown RBP21.49■■□□□ 1.03
CRLF3-201ENST00000324238 BMP3P12645 472 aa21.49■■□□□ 1.03
CRLF3-201ENST00000324238 PWP2Q15269 919 aaKnown RBP21.49■■□□□ 1.03
CRLF3-201ENST00000324238 RFFLQ8WZ73 363 aa21.49■■□□□ 1.03
CRLF3-201ENST00000324238 RNF25Q96BH1 459 aaPredicted RBP21.49■■□□□ 1.03
CRLF3-201ENST00000324238 SLC40A1Q9NP59 571 aa21.49■■□□□ 1.03
CRLF3-201ENST00000324238 ALG6Q9Y672 507 aa21.49■■□□□ 1.03
CRLF3-201ENST00000324238 TMEM150BA6NC51 233 aa21.48■■□□□ 1.03
CRLF3-201ENST00000324238 A6NNZ2 444 aa21.48■■□□□ 1.03
CRLF3-201ENST00000324238 SREBF1P36956 1147 aa21.48■■□□□ 1.03
CRLF3-201ENST00000324238 GCLMP48507 274 aa21.48■■□□□ 1.03
CRLF3-201ENST00000324238 SLC29A2Q14542 456 aa21.48■■□□□ 1.03
CRLF3-201ENST00000324238 TUBB8Q3ZCM7 444 aa21.48■■□□□ 1.03
CRLF3-201ENST00000324238 C6orf89Q6UWU4 347 aa21.48■■□□□ 1.03
CRLF3-201ENST00000324238 SYCE1Q8N0S2 351 aa21.48■■□□□ 1.03
CRLF3-201ENST00000324238 AZI2Q9H6S1 392 aa21.48■■□□□ 1.03
CRLF3-201ENST00000324238 FBXO28Q9NVF7 368 aa21.48■■□□□ 1.03
CRLF3-201ENST00000324238 Q4G0T1 1027 aa21.48■■□□□ 1.03
CRLF3-201ENST00000324238 ARHGEF19Q8IW93 802 aa21.48■■□□□ 1.03
CRLF3-201ENST00000324238 PSMD1Q99460 953 aa21.48■■□□□ 1.03
CRLF3-201ENST00000324238 STK33Q9BYT3 514 aa21.48■■□□□ 1.03
CRLF3-201ENST00000324238 PARVGQ9HBI0 331 aa21.48■■□□□ 1.03
CRLF3-201ENST00000324238 ANKRD63C9JTQ0 380 aa21.48■■□□□ 1.03
CRLF3-201ENST00000324238 HGSO14964 777 aaPredicted RBP21.48■■□□□ 1.03
CRLF3-201ENST00000324238 FTLP02792 175 aaPredicted RBP21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms