RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 LRCH1Q9Y2L9 728 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 ZDHHC9Q9Y397 364 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 PRR36Q9H6K5 1346 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 LRRIQ1Q96JM4 1722 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 M0R2C6 588 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 GATCO43716 136 aaKnown RBP1.41□□□□□ -2.18
CEP290-201ENST00000309041 RAD51DO75771 328 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 THRAP10827 490 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 NMT1P30419 496 aaKnown RBP1.41□□□□□ -2.18
CEP290-201ENST00000309041 MCAMP43121 646 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 ST3GAL1Q11201 340 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 TRPC3Q13507 836 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 KCTD2Q14681 263 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 AGERQ15109 404 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 TERF2Q15554 542 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 TIGD6Q17RP2 521 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 FILIP1LQ4L180 1135 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 TLDC1Q6P9B6 456 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 SIAH3Q8IW03 269 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 SCUBE1Q8IWY4 988 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 CYP4X1Q8N118 509 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 GATSQ8NAP1 163 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 WDR36Q8NI36 951 aaKnown RBP1.41□□□□□ -2.18
CEP290-201ENST00000309041 PPP1R14AQ96A00 147 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 MCCC1Q96RQ3 725 aaPredicted RBP1.41□□□□□ -2.18
CEP290-201ENST00000309041 SRPK1Q96SB4 655 aaKnown RBP1.41□□□□□ -2.18
CEP290-201ENST00000309041 NCAPGQ9BPX3 1015 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 NUDT22Q9BRQ3 303 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 CYP4F11Q9HBI6 524 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 POLE3Q9NRF9 147 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 ZIM2Q9NZV7 527 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 MCM8Q9UJA3 840 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 ERRFI1Q9UJM3 462 aaPredicted RBP1.41□□□□□ -2.18
CEP290-201ENST00000309041 DENND2AQ9ULE3 1009 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 CYP46A1Q9Y6A2 500 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 QSER1Q2KHR3 1735 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.41□□□□□ -2.18
CEP290-201ENST00000309041 CBY3A6NI87 242 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 FAM177BA6PVY3 158 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 KRT16P08779 473 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 CDH3P22223 829 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 LBX1P52954 281 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 WNT3P56703 355 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 SESN3P58005 492 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 HERVK_113P62684 666 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 CUL4BQ13620 913 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 VAMP3Q15836 100 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 GDF6Q6KF10 455 aaPredicted RBP1.41□□□□□ -2.18
CEP290-201ENST00000309041 PI16Q6UXB8 463 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 THAP5Q7Z6K1 395 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 PPM1MQ96MI6 270 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 MED15Q96RN5 788 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 FAM129BQ96TA1 746 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 NRTNQ99748 197 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 TEX12Q9BXU0 123 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 PHAXQ9H814 394 aaKnown RBP1.41□□□□□ -2.18
CEP290-201ENST00000309041 PIDD1Q9HB75 910 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 POLMQ9NP87 494 aaPredicted RBP1.41□□□□□ -2.18
CEP290-201ENST00000309041 SCUBE2Q9NQ36 999 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 HMG20BQ9P0W2 317 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 PCDHA13Q9Y5I0 950 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 CFAP20Q9Y6A4 193 aaKnown RBP1.41□□□□□ -2.18
CEP290-201ENST00000309041 CCDC7Q96M83 1385 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 CLIP1P30622 1438 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 C2orf71A6NGG8 1288 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 PPIP5K2O43314 1243 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 SHOX2O60902 331 aaPredicted RBP1.41□□□□□ -2.18
CEP290-201ENST00000309041 C9P02748 559 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 ENGP17813 658 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 TRIM21P19474 475 aaKnown RBP1.41□□□□□ -2.18
CEP290-201ENST00000309041 MMP16P51512 607 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 AP2B1P63010 937 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 FAM76BQ5HYJ3 339 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 FAM83BQ5T0W9 1011 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 RNF219Q5W0B1 726 aaPredicted RBP1.41□□□□□ -2.18
CEP290-201ENST00000309041 GPBP1Q86WP2 473 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 WDR63Q8IWG1 891 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 ZDHHC23Q8IYP9 409 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 DEPTORQ8TB45 409 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 HELQQ8TDG4 1101 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 DEPDC1BQ8WUY9 529 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 RSPRY1Q96DX4 576 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 RCC1LQ96I51 464 aaKnown RBP1.41□□□□□ -2.18
CEP290-201ENST00000309041 RMDN2Q96LZ7 410 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 SMAD5Q99717 465 aaKnown RBP1.41□□□□□ -2.18
CEP290-201ENST00000309041 TM9SF2Q99805 663 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 NSUN3Q9H649 340 aaKnown RBP1.41□□□□□ -2.18
CEP290-201ENST00000309041 BICC1Q9H694 974 aaKnown RBP1.41□□□□□ -2.18
CEP290-201ENST00000309041 SMARCAL1Q9NZC9 954 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 TRIM10Q9UDY6 481 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 TRIM35Q9UPQ4 493 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 ANKRD6Q9Y2G4 727 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 STK38LQ9Y2H1 464 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 CCDC171Q6TFL3 1326 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 EHBP1L1Q8N3D4 1523 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 hCG_1642624A0A1W2PR95 340 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 TRIM49BA6NDI0 452 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 ATMINO43313 823 aaPredicted RBP1.41□□□□□ -2.18
CEP290-201ENST00000309041 TLL1O43897 1013 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 CYP17A1P05093 508 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms