RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 PLEKHO2Q8TD55 490 aa7.15□□□□□ -1.26
USP47-201ENST00000305481 ACCSQ96QU6 501 aa7.15□□□□□ -1.26
USP47-201ENST00000305481 SPATC1LQ9H0A9 340 aa7.15□□□□□ -1.26
USP47-201ENST00000305481 ASCC2Q9H1I8 757 aaPredicted RBP7.15□□□□□ -1.26
USP47-201ENST00000305481 TMEM206Q9H813 350 aa7.15□□□□□ -1.26
USP47-201ENST00000305481 FBXL5Q9UKA1 691 aa7.15□□□□□ -1.26
USP47-201ENST00000305481 FRMD4BQ9Y2L6 1034 aa7.15□□□□□ -1.26
USP47-201ENST00000305481 ANKRD63C9JTQ0 380 aa7.15□□□□□ -1.26
USP47-201ENST00000305481 SRGAP2O75044 1071 aa7.15□□□□□ -1.26
USP47-201ENST00000305481 ATG7O95352 703 aa7.15□□□□□ -1.26
USP47-201ENST00000305481 MOCS3O95396 460 aa7.15□□□□□ -1.26
USP47-201ENST00000305481 PSAPP07602 524 aa7.15□□□□□ -1.26
USP47-201ENST00000305481 PNMA6AP0CW24 399 aaPredicted RBP7.15□□□□□ -1.26
USP47-201ENST00000305481 EDNRBP24530 442 aa7.15□□□□□ -1.26
USP47-201ENST00000305481 ADSSP30520 456 aa7.15□□□□□ -1.26
USP47-201ENST00000305481 CHMP4BP1P59074 171 aa7.15□□□□□ -1.26
USP47-201ENST00000305481 BFSP1Q12934 665 aa7.15□□□□□ -1.26
USP47-201ENST00000305481 ALCAMQ13740 583 aa7.15□□□□□ -1.26
USP47-201ENST00000305481 TUBB2AQ13885 445 aa7.15□□□□□ -1.26
USP47-201ENST00000305481 PPP2R5AQ15172 486 aa7.15□□□□□ -1.26
USP47-201ENST00000305481 ENOX2Q16206 610 aaKnown RBP7.15□□□□□ -1.26
USP47-201ENST00000305481 ASIC2Q16515 512 aa7.15□□□□□ -1.26
USP47-201ENST00000305481 GNPTABQ3T906 1256 aa7.15□□□□□ -1.26
USP47-201ENST00000305481 IQCEQ6IPM2 695 aa7.15□□□□□ -1.26
USP47-201ENST00000305481 CYFIP1Q7L576 1253 aa7.15□□□□□ -1.26
USP47-201ENST00000305481 ZNF571Q7Z3V5 609 aaPredicted RBP7.15□□□□□ -1.26
USP47-201ENST00000305481 ANKRD13AQ8IZ07 590 aa7.15□□□□□ -1.26
USP47-201ENST00000305481 LMO3Q8TAP4 145 aa7.15□□□□□ -1.26
USP47-201ENST00000305481 CDHR1Q96JP9 859 aa7.15□□□□□ -1.26
USP47-201ENST00000305481 CEP170P1Q96L14 293 aa7.15□□□□□ -1.26
USP47-201ENST00000305481 CCDC43Q96MW1 224 aaKnown RBP7.15□□□□□ -1.26
USP47-201ENST00000305481 NTPCRQ9BSD7 190 aaKnown RBP7.15□□□□□ -1.26
USP47-201ENST00000305481 TUBB2BQ9BVA1 445 aa7.15□□□□□ -1.26
USP47-201ENST00000305481 XPNPEP1Q9NQW7 623 aa7.15□□□□□ -1.26
USP47-201ENST00000305481 ADAMTS1Q9UHI8 967 aa7.15□□□□□ -1.26
USP47-201ENST00000305481 KCNH4Q9UQ05 1017 aa7.15□□□□□ -1.26
USP47-201ENST00000305481 ADGRA3Q8IWK6 1321 aa7.15□□□□□ -1.27
USP47-201ENST00000305481 SYNGAP1Q96PV0 1343 aa7.15□□□□□ -1.27
USP47-201ENST00000305481 LRRN2O75325 713 aa7.15□□□□□ -1.27
USP47-201ENST00000305481 EPHX2P34913 555 aa7.15□□□□□ -1.27
USP47-201ENST00000305481 PRKCEQ02156 737 aa7.15□□□□□ -1.27
USP47-201ENST00000305481 KLHL30Q0D2K2 578 aa7.15□□□□□ -1.27
USP47-201ENST00000305481 SLC18A3Q16572 532 aa7.15□□□□□ -1.27
USP47-201ENST00000305481 TEX35Q5T0J7 233 aa7.15□□□□□ -1.27
USP47-201ENST00000305481 SEPT14Q6ZU15 432 aa7.15□□□□□ -1.27
USP47-201ENST00000305481 USP50Q70EL3 339 aaPredicted RBP7.15□□□□□ -1.27
USP47-201ENST00000305481 EHBP1Q8NDI1 1231 aa7.15□□□□□ -1.27
USP47-201ENST00000305481 OLIG1Q8TAK6 271 aa7.15□□□□□ -1.27
USP47-201ENST00000305481 ATP6V0A1Q93050 837 aa7.15□□□□□ -1.27
USP47-201ENST00000305481 TSGA10Q9BZW7 698 aa7.15□□□□□ -1.27
USP47-201ENST00000305481 GPR88Q9GZN0 384 aa7.15□□□□□ -1.27
USP47-201ENST00000305481 HSPBP1Q9NZL4 362 aa7.15□□□□□ -1.27
USP47-201ENST00000305481 RBPJLQ9UBG7 517 aa7.15□□□□□ -1.27
USP47-201ENST00000305481 TBX20Q9UMR3 447 aa7.15□□□□□ -1.27
USP47-201ENST00000305481 IGSF9BQ9UPX0 1349 aa7.15□□□□□ -1.27
USP47-201ENST00000305481 CXCL11O14625 94 aa7.14□□□□□ -1.27
USP47-201ENST00000305481 SUPT20HL2P0C7V6 817 aa7.14□□□□□ -1.27
USP47-201ENST00000305481 CLCN6P51797 869 aa7.14□□□□□ -1.27
USP47-201ENST00000305481 PPP3CAQ08209 521 aa7.14□□□□□ -1.27
USP47-201ENST00000305481 WHAMMP3Q1A5X7 153 aa7.14□□□□□ -1.27
USP47-201ENST00000305481 Q3C1V9 767 aa7.14□□□□□ -1.27
USP47-201ENST00000305481 OTUD6AQ7L8S5 288 aa7.14□□□□□ -1.27
USP47-201ENST00000305481 NCAPG2Q86XI2 1143 aa7.14□□□□□ -1.27
USP47-201ENST00000305481 RABGGTAQ92696 567 aa7.14□□□□□ -1.27
USP47-201ENST00000305481 FGD4Q96M96 766 aa7.14□□□□□ -1.27
USP47-201ENST00000305481 PAGR1Q9BTK6 254 aa7.14□□□□□ -1.27
USP47-201ENST00000305481 CCDC94Q9BW85 323 aaPredicted RBP7.14□□□□□ -1.27
USP47-201ENST00000305481 PACSIN1Q9BY11 444 aa7.14□□□□□ -1.27
USP47-201ENST00000305481 CYP26B1Q9NR63 512 aa7.14□□□□□ -1.27
USP47-201ENST00000305481 MAFBQ9Y5Q3 323 aaPredicted RBP7.14□□□□□ -1.27
USP47-201ENST00000305481 ARID2Q68CP9 1835 aa7.14□□□□□ -1.27
USP47-201ENST00000305481 CCDC169A6NNP5 214 aa7.14□□□□□ -1.27
USP47-201ENST00000305481 GJA5P36382 358 aa7.14□□□□□ -1.27
USP47-201ENST00000305481 PRKCIP41743 596 aa7.14□□□□□ -1.27
USP47-201ENST00000305481 MCCD1P59942 119 aaPredicted RBP7.14□□□□□ -1.27
USP47-201ENST00000305481 GPAT2Q6NUI2 795 aa7.14□□□□□ -1.27
USP47-201ENST00000305481 MIS18BP1Q6P0N0 1132 aa7.14□□□□□ -1.27
USP47-201ENST00000305481 SLC39A4Q6P5W5 647 aa7.14□□□□□ -1.27
USP47-201ENST00000305481 DNAAF5Q86Y56 855 aa7.14□□□□□ -1.27
USP47-201ENST00000305481 GPR161Q8N6U8 529 aaKnown RBP7.14□□□□□ -1.27
USP47-201ENST00000305481 CEP112Q8N8E3 955 aa7.14□□□□□ -1.27
USP47-201ENST00000305481 ZC3H15Q8WU90 426 aaKnown RBP7.14□□□□□ -1.27
USP47-201ENST00000305481 GOLGA1Q92805 767 aa7.14□□□□□ -1.27
USP47-201ENST00000305481 SPAG5Q96R06 1193 aa7.14□□□□□ -1.27
USP47-201ENST00000305481 CEP89Q96ST8 783 aa7.14□□□□□ -1.27
USP47-201ENST00000305481 FBXO40Q9UH90 709 aa7.14□□□□□ -1.27
USP47-201ENST00000305481 SEPT9Q9UHD8 586 aaPredicted RBP7.14□□□□□ -1.27
USP47-201ENST00000305481 NENFQ9UMX5 172 aa7.14□□□□□ -1.27
USP47-201ENST00000305481 AGTPBP1Q9UPW5 1226 aa7.14□□□□□ -1.27
USP47-201ENST00000305481 SAR1BQ9Y6B6 198 aa7.14□□□□□ -1.27
USP47-201ENST00000305481 IGKV6D-21A0A0A0MT36 114 aa7.14□□□□□ -1.27
USP47-201ENST00000305481 ANO9A1A5B4 782 aa7.14□□□□□ -1.27
USP47-201ENST00000305481 SOCS7O14512 581 aa7.14□□□□□ -1.27
USP47-201ENST00000305481 ZNF185O15231 689 aa7.14□□□□□ -1.27
USP47-201ENST00000305481 ADRB2P07550 413 aa7.14□□□□□ -1.27
USP47-201ENST00000305481 UBA1P22314 1058 aaKnown RBP7.14□□□□□ -1.27
USP47-201ENST00000305481 IRX3P78415 501 aaPredicted RBP7.14□□□□□ -1.27
USP47-201ENST00000305481 PPIL2Q13356 520 aa7.14□□□□□ -1.27
USP47-201ENST00000305481 PHLDB3Q6NSJ2 640 aa7.14□□□□□ -1.27
USP47-201ENST00000305481 DPY19L2Q6NUT2 758 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms