RNA–Protein interactions for RNA: ENST00000303758.7

HMGN1P35-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 35, humanhuman

BASIC

Gene HMGN1P35, Length 594 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P35-201ENST00000303758 TPH2Q8IWU9 490 aa12.15□□□□□ -0.46
HMGN1P35-201ENST00000303758 C4orf19Q8IY42 314 aa12.15□□□□□ -0.46
HMGN1P35-201ENST00000303758 KLHL23Q8NBE8 558 aa12.15□□□□□ -0.46
HMGN1P35-201ENST00000303758 NEK9Q8TD19 979 aa12.15□□□□□ -0.46
HMGN1P35-201ENST00000303758 PSPC1Q8WXF1 523 aaKnown RBP12.15□□□□□ -0.46
HMGN1P35-201ENST00000303758 NECAB3Q96P71 396 aaPredicted RBP12.15□□□□□ -0.46
HMGN1P35-201ENST00000303758 TTC12Q9H892 705 aaPredicted RBP12.15□□□□□ -0.46
HMGN1P35-201ENST00000303758 CLDND1Q9NY35 253 aa12.15□□□□□ -0.46
HMGN1P35-201ENST00000303758 RGL1Q9NZL6 768 aa12.15□□□□□ -0.46
HMGN1P35-201ENST00000303758 PLAGL2Q9UPG8 496 aa12.15□□□□□ -0.46
HMGN1P35-201ENST00000303758 PIN4Q9Y237 131 aaKnown RBP12.15□□□□□ -0.46
HMGN1P35-201ENST00000303758 COL4A3BPQ9Y5P4 624 aa12.15□□□□□ -0.46
HMGN1P35-201ENST00000303758 NCK2O43639 380 aa12.14□□□□□ -0.47
HMGN1P35-201ENST00000303758 GAS2O43903 313 aaKnown RBP12.14□□□□□ -0.47
HMGN1P35-201ENST00000303758 ST18O60284 1047 aa12.14□□□□□ -0.47
HMGN1P35-201ENST00000303758 CSDE1O75534 798 aaKnown RBP12.14□□□□□ -0.47
HMGN1P35-201ENST00000303758 LAG3P18627 525 aa12.14□□□□□ -0.47
HMGN1P35-201ENST00000303758 MCM7P33993 719 aa12.14□□□□□ -0.47
HMGN1P35-201ENST00000303758 SPIRE1Q08AE8 756 aa12.14□□□□□ -0.47
HMGN1P35-201ENST00000303758 EMC2Q15006 297 aa12.14□□□□□ -0.47
HMGN1P35-201ENST00000303758 RABEP1Q15276 862 aa12.14□□□□□ -0.47
HMGN1P35-201ENST00000303758 CSPP1Q1MSJ5 1256 aa12.14□□□□□ -0.47
HMGN1P35-201ENST00000303758 TWF2Q6IBS0 349 aaKnown RBP12.14□□□□□ -0.47
HMGN1P35-201ENST00000303758 ECHDC2Q86YB7 292 aa12.14□□□□□ -0.47
HMGN1P35-201ENST00000303758 KSR1Q8IVT5 923 aa12.14□□□□□ -0.47
HMGN1P35-201ENST00000303758 THNSL1Q8IYQ7 743 aa12.14□□□□□ -0.47
HMGN1P35-201ENST00000303758 LRRC43Q8N309 656 aa12.14□□□□□ -0.47
HMGN1P35-201ENST00000303758 POF1BQ8WVV4 589 aa12.14□□□□□ -0.47
HMGN1P35-201ENST00000303758 TCP11Q8WWU5 503 aa12.14□□□□□ -0.47
HMGN1P35-201ENST00000303758 PABPC5Q96DU9 382 aaKnown RBP12.14□□□□□ -0.47
HMGN1P35-201ENST00000303758 CEP89Q96ST8 783 aa12.14□□□□□ -0.47
HMGN1P35-201ENST00000303758 MTRQ99707 1265 aa12.14□□□□□ -0.47
HMGN1P35-201ENST00000303758 EIF2AK1Q9BQI3 630 aaKnown RBP12.14□□□□□ -0.47
HMGN1P35-201ENST00000303758 TMEM117Q9H0C3 514 aa12.14□□□□□ -0.47
HMGN1P35-201ENST00000303758 IGFLR1Q9H665 355 aa12.14□□□□□ -0.47
HMGN1P35-201ENST00000303758 TYW1Q9NV66 732 aaKnown RBP12.14□□□□□ -0.47
HMGN1P35-201ENST00000303758 WRAP73Q9P2S5 460 aaPredicted RBP12.14□□□□□ -0.47
HMGN1P35-201ENST00000303758 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.13□□□□□ -0.47
HMGN1P35-201ENST00000303758 C19orf67A6NJJ6 358 aa12.13□□□□□ -0.47
HMGN1P35-201ENST00000303758 H3BQ06 376 aaPredicted RBP12.13□□□□□ -0.47
HMGN1P35-201ENST00000303758 ITGB1P05556 798 aa12.13□□□□□ -0.47
HMGN1P35-201ENST00000303758 SRGAP2CP0DJJ0 459 aa12.13□□□□□ -0.47
HMGN1P35-201ENST00000303758 RBM25P49756 843 aaKnown RBP12.13□□□□□ -0.47
HMGN1P35-201ENST00000303758 FAM189BP81408 668 aa12.13□□□□□ -0.47
HMGN1P35-201ENST00000303758 LEXMQ3ZCV2 418 aa12.13□□□□□ -0.47
HMGN1P35-201ENST00000303758 COLGALT1Q8NBJ5 622 aa12.13□□□□□ -0.47
HMGN1P35-201ENST00000303758 SPPL3Q8TCT6 385 aa12.13□□□□□ -0.47
HMGN1P35-201ENST00000303758 TMEM143Q96AN5 459 aa12.13□□□□□ -0.47
HMGN1P35-201ENST00000303758 FOXP1Q9H334 677 aaPredicted RBP12.13□□□□□ -0.47
HMGN1P35-201ENST00000303758 DHX33Q9H6R0 707 aaKnown RBP12.13□□□□□ -0.47
HMGN1P35-201ENST00000303758 CHST12Q9NRB3 414 aa12.13□□□□□ -0.47
HMGN1P35-201ENST00000303758 NOL7Q9UMY1 257 aaKnown RBP12.13□□□□□ -0.47
HMGN1P35-201ENST00000303758 FAM50BQ9Y247 325 aa12.13□□□□□ -0.47
HMGN1P35-201ENST00000303758 KIF3AQ9Y496 699 aa12.13□□□□□ -0.47
HMGN1P35-201ENST00000303758 A0A0U1RQF3 1178 aa12.12□□□□□ -0.47
HMGN1P35-201ENST00000303758 POTEMA6NI47 508 aa12.12□□□□□ -0.47
HMGN1P35-201ENST00000303758 WNT7AO00755 349 aa12.12□□□□□ -0.47
HMGN1P35-201ENST00000303758 EOMESO95936 686 aa12.12□□□□□ -0.47
HMGN1P35-201ENST00000303758 SKIP12755 728 aa12.12□□□□□ -0.47
HMGN1P35-201ENST00000303758 PUS10Q3MIT2 529 aaKnown RBP12.12□□□□□ -0.47
HMGN1P35-201ENST00000303758 PTCRAQ6ISU1 281 aaPredicted RBP12.12□□□□□ -0.47
HMGN1P35-201ENST00000303758 ZNF579Q8NAF0 562 aaKnown RBP12.12□□□□□ -0.47
HMGN1P35-201ENST00000303758 FBXO18Q8NFZ0 1043 aa12.12□□□□□ -0.47
HMGN1P35-201ENST00000303758 HELQQ8TDG4 1101 aa12.12□□□□□ -0.47
HMGN1P35-201ENST00000303758 MICAL1Q8TDZ2 1067 aa12.12□□□□□ -0.47
HMGN1P35-201ENST00000303758 PRPF31Q8WWY3 499 aaKnown RBP12.12□□□□□ -0.47
HMGN1P35-201ENST00000303758 KIF2CQ99661 725 aa12.12□□□□□ -0.47
HMGN1P35-201ENST00000303758 MRPL9Q9BYD2 267 aaKnown RBP12.12□□□□□ -0.47
HMGN1P35-201ENST00000303758 HCSTQ9UBK5 93 aa12.12□□□□□ -0.47
HMGN1P35-201ENST00000303758 BDP1A6H8Y1 2624 aa12.11□□□□□ -0.47
HMGN1P35-201ENST00000303758 ASAP2O43150 1006 aa12.11□□□□□ -0.47
HMGN1P35-201ENST00000303758 DGAT1O75907 488 aa12.11□□□□□ -0.47
HMGN1P35-201ENST00000303758 FGF18O76093 207 aa12.11□□□□□ -0.47
HMGN1P35-201ENST00000303758 ERLIN2O94905 339 aa12.11□□□□□ -0.47
HMGN1P35-201ENST00000303758 SLITRK3O94933 977 aa12.11□□□□□ -0.47
HMGN1P35-201ENST00000303758 OR52Z1P0C646 297 aa12.11□□□□□ -0.47
HMGN1P35-201ENST00000303758 DNAJB1P25685 340 aa12.11□□□□□ -0.47
HMGN1P35-201ENST00000303758 PPM1AP35813 382 aa12.11□□□□□ -0.47
HMGN1P35-201ENST00000303758 PHKA2P46019 1235 aa12.11□□□□□ -0.47
HMGN1P35-201ENST00000303758 NDUFV1P49821 464 aa12.11□□□□□ -0.47
HMGN1P35-201ENST00000303758 RAB27AP51159 221 aa12.11□□□□□ -0.47
HMGN1P35-201ENST00000303758 UBE3AQ05086 875 aa12.11□□□□□ -0.47
HMGN1P35-201ENST00000303758 LAMTOR4Q0VGL1 99 aa12.11□□□□□ -0.47
HMGN1P35-201ENST00000303758 HYAL1Q12794 435 aa12.11□□□□□ -0.47
HMGN1P35-201ENST00000303758 ORC2Q13416 577 aaPredicted RBP12.11□□□□□ -0.47
HMGN1P35-201ENST00000303758 TFDP1Q14186 410 aa12.11□□□□□ -0.47
HMGN1P35-201ENST00000303758 ZNF174Q15697 407 aa12.11□□□□□ -0.47
HMGN1P35-201ENST00000303758 TTC38Q5R3I4 469 aa12.11□□□□□ -0.47
HMGN1P35-201ENST00000303758 SRGAP1Q7Z6B7 1085 aa12.11□□□□□ -0.47
HMGN1P35-201ENST00000303758 NOSTRINQ8IVI9 506 aa12.11□□□□□ -0.47
HMGN1P35-201ENST00000303758 RNF149Q8NC42 400 aa12.11□□□□□ -0.47
HMGN1P35-201ENST00000303758 ERMNQ8TAM6 284 aa12.11□□□□□ -0.47
HMGN1P35-201ENST00000303758 ZNF558Q96NG5 402 aa12.11□□□□□ -0.47
HMGN1P35-201ENST00000303758 CASD1Q96PB1 797 aa12.11□□□□□ -0.47
HMGN1P35-201ENST00000303758 MTMR9Q96QG7 549 aa12.11□□□□□ -0.47
HMGN1P35-201ENST00000303758 TMEM60Q9H2L4 133 aa12.11□□□□□ -0.47
HMGN1P35-201ENST00000303758 CWH43Q9H720 699 aa12.11□□□□□ -0.47
HMGN1P35-201ENST00000303758 TLR9Q9NR96 1032 aa12.11□□□□□ -0.47
HMGN1P35-201ENST00000303758 ANKEF1Q9NU02 776 aa12.11□□□□□ -0.47
HMGN1P35-201ENST00000303758 FAM105AQ9NUU6 356 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms