RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 EYA4O95677 639 aa16.94■□□□□ 0.3
CHAF1A-201ENST00000301280 RPS6P62753 249 aaKnown RBP16.94■□□□□ 0.3
CHAF1A-201ENST00000301280 SPIRE1Q08AE8 756 aa16.94■□□□□ 0.3
CHAF1A-201ENST00000301280 MTMR1Q13613 665 aa16.94■□□□□ 0.3
CHAF1A-201ENST00000301280 SLC15A2Q16348 729 aa16.94■□□□□ 0.3
CHAF1A-201ENST00000301280 CDR2LQ86X02 465 aaPredicted RBP16.94■□□□□ 0.3
CHAF1A-201ENST00000301280 DHX38Q92620 1227 aaKnown RBP16.94■□□□□ 0.3
CHAF1A-201ENST00000301280 PPANQ9NQ55 473 aaKnown RBP16.94■□□□□ 0.3
CHAF1A-201ENST00000301280 CYP3A7-CYP3A51PA0A087WV96 503 aa16.93■□□□□ 0.3
CHAF1A-201ENST00000301280 WNT10BO00744 389 aa16.93■□□□□ 0.3
CHAF1A-201ENST00000301280 CYP3A7P24462 503 aa16.93■□□□□ 0.3
CHAF1A-201ENST00000301280 LLGL2Q6P1M3 1020 aa16.93■□□□□ 0.3
CHAF1A-201ENST00000301280 PASD1Q8IV76 773 aa16.93■□□□□ 0.3
CHAF1A-201ENST00000301280 GLG1Q92896 1179 aa16.93■□□□□ 0.3
CHAF1A-201ENST00000301280 FAM20AQ96MK3 541 aa16.93■□□□□ 0.3
CHAF1A-201ENST00000301280 TCHPQ9BT92 498 aa16.93■□□□□ 0.3
CHAF1A-201ENST00000301280 ADAM33Q9BZ11 813 aa16.93■□□□□ 0.3
CHAF1A-201ENST00000301280 TYW1Q9NV66 732 aaKnown RBP16.93■□□□□ 0.3
CHAF1A-201ENST00000301280 PCDHA2Q9Y5H9 948 aa16.93■□□□□ 0.3
CHAF1A-201ENST00000301280 DAPK3O43293 454 aa16.93■□□□□ 0.3
CHAF1A-201ENST00000301280 SLCO1A2P46721 670 aa16.93■□□□□ 0.3
CHAF1A-201ENST00000301280 ITIH3Q06033 890 aa16.93■□□□□ 0.3
CHAF1A-201ENST00000301280 IFFO1Q0D2I5 559 aa16.93■□□□□ 0.3
CHAF1A-201ENST00000301280 BIRC3Q13489 604 aa16.93■□□□□ 0.3
CHAF1A-201ENST00000301280 MTM1Q13496 603 aa16.93■□□□□ 0.3
CHAF1A-201ENST00000301280 ASTE1Q2TB18 679 aaPredicted RBP16.93■□□□□ 0.3
CHAF1A-201ENST00000301280 NBPF12Q5TAG4 269 aaPredicted RBP16.93■□□□□ 0.3
CHAF1A-201ENST00000301280 MKL1Q969V6 931 aa16.93■□□□□ 0.3
CHAF1A-201ENST00000301280 ATG4CQ96DT6 458 aa16.93■□□□□ 0.3
CHAF1A-201ENST00000301280 USTQ9Y2C2 406 aa16.93■□□□□ 0.3
CHAF1A-201ENST00000301280 FRMD3A2A2Y4 597 aa16.93■□□□□ 0.3
CHAF1A-201ENST00000301280 BUB1BO60566 1050 aaPredicted RBP16.93■□□□□ 0.3
CHAF1A-201ENST00000301280 FKBP1AP62942 108 aaKnown RBP16.93■□□□□ 0.3
CHAF1A-201ENST00000301280 ZNF394Q53GI3 561 aa16.93■□□□□ 0.3
CHAF1A-201ENST00000301280 PACS2Q86VP3 889 aa16.93■□□□□ 0.3
CHAF1A-201ENST00000301280 SPIRE2Q8WWL2 714 aa16.93■□□□□ 0.3
CHAF1A-201ENST00000301280 NACC1Q96RE7 527 aa16.93■□□□□ 0.3
CHAF1A-201ENST00000301280 IDI2Q9BXS1 227 aa16.93■□□□□ 0.3
CHAF1A-201ENST00000301280 VCPKMTQ9H867 229 aa16.93■□□□□ 0.3
CHAF1A-201ENST00000301280 NPM3O75607 178 aaKnown RBP16.92■□□□□ 0.3
CHAF1A-201ENST00000301280 GNA14O95837 355 aa16.92■□□□□ 0.3
CHAF1A-201ENST00000301280 OSTNP61366 133 aa16.92■□□□□ 0.3
CHAF1A-201ENST00000301280 BAATQ14032 418 aaPredicted RBP16.92■□□□□ 0.3
CHAF1A-201ENST00000301280 CEP63Q96MT8 703 aa16.92■□□□□ 0.3
CHAF1A-201ENST00000301280 THAP2Q9H0W7 228 aa16.92■□□□□ 0.3
CHAF1A-201ENST00000301280 ANKFY1Q9P2R3 1169 aa16.92■□□□□ 0.3
CHAF1A-201ENST00000301280 NR2E1Q9Y466 385 aa16.92■□□□□ 0.3
CHAF1A-201ENST00000301280 ZHX2Q9Y6X8 837 aa16.92■□□□□ 0.3
CHAF1A-201ENST00000301280 TARSL2A2RTX5 802 aaKnown RBP16.92■□□□□ 0.3
CHAF1A-201ENST00000301280 TTI1O43156 1089 aa16.92■□□□□ 0.3
CHAF1A-201ENST00000301280 MTERF2Q49AM1 385 aa16.92■□□□□ 0.3
CHAF1A-201ENST00000301280 TATDN1Q6P1N9 297 aa16.92■□□□□ 0.3
CHAF1A-201ENST00000301280 MOXD1Q6UVY6 613 aa16.92■□□□□ 0.3
CHAF1A-201ENST00000301280 CBWD2Q8IUF1 395 aa16.92■□□□□ 0.3
CHAF1A-201ENST00000301280 PAGR1Q9BTK6 254 aa16.92■□□□□ 0.3
CHAF1A-201ENST00000301280 GLT8D2Q9H1C3 349 aa16.92■□□□□ 0.3
CHAF1A-201ENST00000301280 VAV3Q9UKW4 847 aa16.92■□□□□ 0.3
CHAF1A-201ENST00000301280 ATP8A1Q9Y2Q0 1164 aa16.92■□□□□ 0.3
CHAF1A-201ENST00000301280 PJA2O43164 708 aa16.91■□□□□ 0.3
CHAF1A-201ENST00000301280 CYP26A1O43174 497 aa16.91■□□□□ 0.3
CHAF1A-201ENST00000301280 RPS6KA5O75582 802 aa16.91■□□□□ 0.3
CHAF1A-201ENST00000301280 PRLRP16471 622 aa16.91■□□□□ 0.3
CHAF1A-201ENST00000301280 MARK3P27448 753 aa16.91■□□□□ 0.3
CHAF1A-201ENST00000301280 GUCY1A3Q02108 690 aa16.91■□□□□ 0.3
CHAF1A-201ENST00000301280 UGCGQ16739 394 aa16.91■□□□□ 0.3
CHAF1A-201ENST00000301280 SEPT14Q6ZU15 432 aa16.91■□□□□ 0.3
CHAF1A-201ENST00000301280 BCAS4Q8TDM0 211 aa16.91■□□□□ 0.3
CHAF1A-201ENST00000301280 RPGRIP1Q96KN7 1286 aa16.91■□□□□ 0.3
CHAF1A-201ENST00000301280 CEP170P1Q96L14 293 aa16.91■□□□□ 0.3
CHAF1A-201ENST00000301280 AGPAT3Q9NRZ7 376 aa16.91■□□□□ 0.3
CHAF1A-201ENST00000301280 AGPSO00116 658 aa16.91■□□□□ 0.3
CHAF1A-201ENST00000301280 KCNJ1P48048 391 aa16.91■□□□□ 0.3
CHAF1A-201ENST00000301280 FMO5P49326 533 aa16.91■□□□□ 0.3
CHAF1A-201ENST00000301280 RNF187Q5TA31 235 aaPredicted RBP16.91■□□□□ 0.3
CHAF1A-201ENST00000301280 METTL13Q8N6R0 699 aa16.91■□□□□ 0.3
CHAF1A-201ENST00000301280 ARHGEF26Q96DR7 871 aa16.91■□□□□ 0.3
CHAF1A-201ENST00000301280 LARSQ9P2J5 1176 aaKnown RBP16.91■□□□□ 0.3
CHAF1A-201ENST00000301280 FAM184BQ9ULE4 1060 aa16.91■□□□□ 0.3
CHAF1A-201ENST00000301280 RIPK3Q9Y572 518 aa16.91■□□□□ 0.3
CHAF1A-201ENST00000301280 DNAH12Q6ZR08 3092 aa16.91■□□□□ 0.3
CHAF1A-201ENST00000301280 DDX3XO00571 662 aaKnown RBP eCLIP16.91■□□□□ 0.36e-21■■■■□ 24.4
CHAF1A-201ENST00000301280 SPOPO43791 374 aa16.91■□□□□ 0.3
CHAF1A-201ENST00000301280 SLC35G2Q8TBE7 412 aa16.91■□□□□ 0.3
CHAF1A-201ENST00000301280 POMGNT1Q8WZA1 660 aa16.91■□□□□ 0.3
CHAF1A-201ENST00000301280 RUBCNQ92622 972 aa16.91■□□□□ 0.3
CHAF1A-201ENST00000301280 INTS2Q9H0H0 1204 aaKnown RBP16.91■□□□□ 0.3
CHAF1A-201ENST00000301280 CYP3A4P08684 503 aa16.9■□□□□ 0.3
CHAF1A-201ENST00000301280 SWSAP1Q6NVH7 229 aa16.9■□□□□ 0.3
CHAF1A-201ENST00000301280 CAPN12Q6ZSI9 719 aa16.9■□□□□ 0.3
CHAF1A-201ENST00000301280 IFT20Q8IY31 132 aa16.9■□□□□ 0.3
CHAF1A-201ENST00000301280 ZIM3Q96PE6 472 aa16.9■□□□□ 0.3
CHAF1A-201ENST00000301280 WRNIP1Q96S55 665 aa16.9■□□□□ 0.3
CHAF1A-201ENST00000301280 TSPYL1Q9H0U9 437 aa16.9■□□□□ 0.3
CHAF1A-201ENST00000301280 RPAP3Q9H6T3 665 aaPredicted RBP16.9■□□□□ 0.3
CHAF1A-201ENST00000301280 SEPT9Q9UHD8 586 aaPredicted RBP16.9■□□□□ 0.3
CHAF1A-201ENST00000301280 HNRNPDLO14979 420 aaKnown RBP16.9■□□□□ 0.3
CHAF1A-201ENST00000301280 CAP2P40123 477 aa16.9■□□□□ 0.3
CHAF1A-201ENST00000301280 MMP14P50281 582 aa16.9■□□□□ 0.3
CHAF1A-201ENST00000301280 PLTPP55058 493 aa16.9■□□□□ 0.3
CHAF1A-201ENST00000301280 NAB2Q15742 525 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms