RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 HCSTQ9UBK5 93 aa15.76■□□□□ 0.11
TPM1-202ENST00000288398 ATG2AQ2TAZ0 1938 aa15.76■□□□□ 0.11
TPM1-202ENST00000288398 GCFC2P16383 781 aaKnown RBP15.75■□□□□ 0.11
TPM1-202ENST00000288398 TECP42680 631 aa15.75■□□□□ 0.11
TPM1-202ENST00000288398 SMC1AQ14683 1233 aaKnown RBP15.75■□□□□ 0.11
TPM1-202ENST00000288398 TARBP2Q15633 366 aaKnown RBP15.75■□□□□ 0.11
TPM1-202ENST00000288398 HERC4Q5GLZ8 1057 aaPredicted RBP15.75■□□□□ 0.11
TPM1-202ENST00000288398 LLGL2Q6P1M3 1020 aa15.75■□□□□ 0.11
TPM1-202ENST00000288398 CATSPER4Q7RTX7 472 aa15.75■□□□□ 0.11
TPM1-202ENST00000288398 NEK8Q86SG6 692 aa15.75■□□□□ 0.11
TPM1-202ENST00000288398 TMEM169Q96HH4 297 aa15.75■□□□□ 0.11
TPM1-202ENST00000288398 FAM20AQ96MK3 541 aa15.75■□□□□ 0.11
TPM1-202ENST00000288398 NLRP4Q96MN2 994 aa15.75■□□□□ 0.11
TPM1-202ENST00000288398 PHF7Q9BWX1 381 aaPredicted RBP15.75■□□□□ 0.11
TPM1-202ENST00000288398 KCNJ14Q9UNX9 436 aa15.75■□□□□ 0.11
TPM1-202ENST00000288398 PIN4Q9Y237 131 aaKnown RBP15.75■□□□□ 0.11
TPM1-202ENST00000288398 FNDC1Q4ZHG4 1894 aaPredicted RBP15.74■□□□□ 0.11
TPM1-202ENST00000288398 A0A087WZ62 844 aa15.74■□□□□ 0.11
TPM1-202ENST00000288398 CCNT1O60563 726 aaKnown RBP15.74■□□□□ 0.11
TPM1-202ENST00000288398 BAG4O95429 457 aaKnown RBP15.74■□□□□ 0.11
TPM1-202ENST00000288398 GLP2RO95838 553 aa15.74■□□□□ 0.11
TPM1-202ENST00000288398 QARSP47897 775 aaKnown RBP15.74■□□□□ 0.11
TPM1-202ENST00000288398 RAB27AP51159 221 aa15.74■□□□□ 0.11
TPM1-202ENST00000288398 POLGP54098 1239 aaPredicted RBP15.74■□□□□ 0.11
TPM1-202ENST00000288398 RNASELQ05823 741 aaKnown RBP15.74■□□□□ 0.11
TPM1-202ENST00000288398 ANKRD1Q15327 319 aa15.74■□□□□ 0.11
TPM1-202ENST00000288398 GLB1LQ6UWU2 654 aa15.74■□□□□ 0.11
TPM1-202ENST00000288398 ETNPPLQ8TBG4 499 aa15.74■□□□□ 0.11
TPM1-202ENST00000288398 RPGRIP1Q96KN7 1286 aa15.74■□□□□ 0.11
TPM1-202ENST00000288398 AIFM3Q96NN9 605 aa15.74■□□□□ 0.11
TPM1-202ENST00000288398 SH2D3AQ9BRG2 576 aa15.74■□□□□ 0.11
TPM1-202ENST00000288398 FDXACB1Q9BRP7 624 aaPredicted RBP15.74■□□□□ 0.11
TPM1-202ENST00000288398 PLXNA4Q9HCM2 1894 aa15.74■□□□□ 0.11
TPM1-202ENST00000288398 TMEM150BA6NC51 233 aa15.73■□□□□ 0.11
TPM1-202ENST00000288398 FSCN2O14926 492 aa15.73■□□□□ 0.11
TPM1-202ENST00000288398 MAFO75444 373 aaPredicted RBP15.73■□□□□ 0.11
TPM1-202ENST00000288398 CSDE1O75534 798 aaKnown RBP15.73■□□□□ 0.11
TPM1-202ENST00000288398 ATF7P17544 494 aaPredicted RBP15.73■□□□□ 0.11
TPM1-202ENST00000288398 PBX3P40426 434 aa15.73■□□□□ 0.11
TPM1-202ENST00000288398 TPRNQ4KMQ1 711 aa15.73■□□□□ 0.11
TPM1-202ENST00000288398 CLLU1OSQ5K130 101 aa15.73■□□□□ 0.11
TPM1-202ENST00000288398 LRRC55Q6ZSA7 311 aa15.73■□□□□ 0.11
TPM1-202ENST00000288398 OTUD6AQ7L8S5 288 aa15.73■□□□□ 0.11
TPM1-202ENST00000288398 ZBTB33Q86T24 672 aa15.73■□□□□ 0.11
TPM1-202ENST00000288398 CASP10Q92851 521 aa15.73■□□□□ 0.11
TPM1-202ENST00000288398 PGBD4Q96DM1 585 aa15.73■□□□□ 0.11
TPM1-202ENST00000288398 CEP170P1Q96L14 293 aa15.73■□□□□ 0.11
TPM1-202ENST00000288398 MBOAT7Q96N66 472 aa15.73■□□□□ 0.11
TPM1-202ENST00000288398 CYP26B1Q9NR63 512 aa15.73■□□□□ 0.11
TPM1-202ENST00000288398 PPME1Q9Y570 386 aa15.73■□□□□ 0.11
TPM1-202ENST00000288398 STK36Q9NRP7 1315 aa15.72■□□□□ 0.11
TPM1-202ENST00000288398 M0R2N6 131 aa15.72■□□□□ 0.11
TPM1-202ENST00000288398 SLC37A4O43826 429 aa15.72■□□□□ 0.11
TPM1-202ENST00000288398 EDIL3O43854 480 aa15.72■□□□□ 0.11
TPM1-202ENST00000288398 ZC3H11AO75152 810 aaKnown RBP eCLIP15.72■□□□□ 0.11
TPM1-202ENST00000288398 P4HBP07237 508 aaKnown RBP15.72■□□□□ 0.11
TPM1-202ENST00000288398 HOXB8P17481 243 aaPredicted RBP15.72■□□□□ 0.11
TPM1-202ENST00000288398 RFC5P40937 340 aa15.72■□□□□ 0.11
TPM1-202ENST00000288398 PHKA2P46019 1235 aa15.72■□□□□ 0.11
TPM1-202ENST00000288398 SCRN1Q12765 414 aa15.72■□□□□ 0.11
TPM1-202ENST00000288398 PPP2R5CQ13362 524 aa15.72■□□□□ 0.11
TPM1-202ENST00000288398 DRP2Q13474 957 aa15.72■□□□□ 0.11
TPM1-202ENST00000288398 PLA2G4FQ68DD2 849 aa15.72■□□□□ 0.11
TPM1-202ENST00000288398 PPP4R3AQ6IN85 833 aa15.72■□□□□ 0.11
TPM1-202ENST00000288398 CES5AQ6NT32 575 aa15.72■□□□□ 0.11
TPM1-202ENST00000288398 ANKRD54Q6NXT1 300 aa15.72■□□□□ 0.11
TPM1-202ENST00000288398 PIK3AP1Q6ZUJ8 805 aa15.72■□□□□ 0.11
TPM1-202ENST00000288398 URGCPQ8TCY9 931 aa15.72■□□□□ 0.11
TPM1-202ENST00000288398 PSPC1Q8WXF1 523 aaKnown RBP15.72■□□□□ 0.11
TPM1-202ENST00000288398 EDAQ92838 391 aa15.72■□□□□ 0.11
TPM1-202ENST00000288398 CCDC43Q96MW1 224 aaKnown RBP15.72■□□□□ 0.11
TPM1-202ENST00000288398 PHF20Q9BVI0 1012 aa15.72■□□□□ 0.11
TPM1-202ENST00000288398 KCNH6Q9H252 994 aa15.72■□□□□ 0.11
TPM1-202ENST00000288398 RNF19AQ9NV58 838 aa15.72■□□□□ 0.11
TPM1-202ENST00000288398 INPP5FQ9Y2H2 1132 aa15.72■□□□□ 0.11
TPM1-202ENST00000288398 IGKV6-21A0A0C4DH24 114 aa15.71■□□□□ 0.11
TPM1-202ENST00000288398 SPDYE4A6NLX3 237 aa15.71■□□□□ 0.11
TPM1-202ENST00000288398 HIDE1A8MVS5 230 aa15.71■□□□□ 0.11
TPM1-202ENST00000288398 LOC730098B7Z3J9 87 aa15.71■□□□□ 0.11
TPM1-202ENST00000288398 TBX3O15119 743 aa15.71■□□□□ 0.11
TPM1-202ENST00000288398 EIF5BO60841 1220 aaKnown RBP15.71■□□□□ 0.11
TPM1-202ENST00000288398 BCAR1P56945 870 aa15.71■□□□□ 0.11
TPM1-202ENST00000288398 RBM10P98175 930 aaKnown RBP15.71■□□□□ 0.11
TPM1-202ENST00000288398 CBX2Q14781 532 aaPredicted RBP15.71■□□□□ 0.11
TPM1-202ENST00000288398 LONRF3Q496Y0 759 aa15.71■□□□□ 0.11
TPM1-202ENST00000288398 NCAPH2Q6IBW4 605 aa15.71■□□□□ 0.11
TPM1-202ENST00000288398 B3GNT9Q6UX72 402 aa15.71■□□□□ 0.11
TPM1-202ENST00000288398 ANO5Q75V66 913 aa15.71■□□□□ 0.11
TPM1-202ENST00000288398 ZNF598Q86UK7 904 aaKnown RBP15.71■□□□□ 0.11
TPM1-202ENST00000288398 SUGP1Q8IWZ8 645 aaKnown RBP15.71■□□□□ 0.11
TPM1-202ENST00000288398 SLFN12Q8IYM2 578 aa15.71■□□□□ 0.11
TPM1-202ENST00000288398 SLC39A11Q8N1S5 342 aa15.71■□□□□ 0.11
TPM1-202ENST00000288398 TCP11Q8WWU5 503 aa15.71■□□□□ 0.11
TPM1-202ENST00000288398 APOL5Q9BWW9 433 aa15.71■□□□□ 0.11
TPM1-202ENST00000288398 FAM105AQ9NUU6 356 aa15.71■□□□□ 0.11
TPM1-202ENST00000288398 ORC3Q9UBD5 711 aaPredicted RBP15.71■□□□□ 0.11
TPM1-202ENST00000288398 COL4A3BPQ9Y5P4 624 aa15.71■□□□□ 0.11
TPM1-202ENST00000288398 GAS2O43903 313 aaKnown RBP15.7■□□□□ 0.1
TPM1-202ENST00000288398 PFKFB2O60825 505 aa15.7■□□□□ 0.1
TPM1-202ENST00000288398 SRGAP2CP0DJJ0 459 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms