RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 EPB41L5Q9HCM4 733 aa11.26□□□□□ -0.61
UPF3B-201ENST00000276201 SLC12A6Q9UHW9 1150 aa11.26□□□□□ -0.61
UPF3B-201ENST00000276201 ZNF214Q9UL59 606 aaPredicted RBP11.26□□□□□ -0.61
UPF3B-201ENST00000276201 NFU1Q9UMS0 254 aa11.26□□□□□ -0.61
UPF3B-201ENST00000276201 NFS1Q9Y697 457 aa11.26□□□□□ -0.61
UPF3B-201ENST00000276201 PDHBP11177 359 aa11.25□□□□□ -0.61
UPF3B-201ENST00000276201 PLCG1P19174 1290 aa11.25□□□□□ -0.61
UPF3B-201ENST00000276201 ANXA13P27216 316 aa11.25□□□□□ -0.61
UPF3B-201ENST00000276201 RDXP35241 583 aaKnown RBP11.25□□□□□ -0.61
UPF3B-201ENST00000276201 STAT2P52630 851 aa11.25□□□□□ -0.61
UPF3B-201ENST00000276201 PLS1Q14651 629 aa11.25□□□□□ -0.61
UPF3B-201ENST00000276201 KRT25Q7Z3Z0 450 aa11.25□□□□□ -0.61
UPF3B-201ENST00000276201 KIAA0895Q8NCT3 520 aa11.25□□□□□ -0.61
UPF3B-201ENST00000276201 SH3TC2Q8TF17 1288 aa11.25□□□□□ -0.61
UPF3B-201ENST00000276201 CENPTQ96BT3 561 aa11.25□□□□□ -0.61
UPF3B-201ENST00000276201 ARMC5Q96C12 935 aa11.25□□□□□ -0.61
UPF3B-201ENST00000276201 PBKQ96KB5 322 aa11.25□□□□□ -0.61
UPF3B-201ENST00000276201 LRRC27Q9C0I9 530 aa11.25□□□□□ -0.61
UPF3B-201ENST00000276201 SALL4Q9UJQ4 1053 aa11.25□□□□□ -0.61
UPF3B-201ENST00000276201 FRMPD2Q68DX3 1309 aaPredicted RBP11.25□□□□□ -0.61
UPF3B-201ENST00000276201 BAZ2BQ9UIF8 2168 aaKnown RBP11.25□□□□□ -0.61
UPF3B-201ENST00000276201 GMNCA6NCL1 334 aa11.25□□□□□ -0.61
UPF3B-201ENST00000276201 CCDC85CA6NKD9 419 aa11.25□□□□□ -0.61
UPF3B-201ENST00000276201 LRRC53A6NM62 1247 aa11.25□□□□□ -0.61
UPF3B-201ENST00000276201 TRAPPC3O43617 180 aa11.25□□□□□ -0.61
UPF3B-201ENST00000276201 PLA2G6O60733 806 aa11.25□□□□□ -0.61
UPF3B-201ENST00000276201 CAPN15O75808 1086 aa11.25□□□□□ -0.61
UPF3B-201ENST00000276201 KRT14P02533 472 aa11.25□□□□□ -0.61
UPF3B-201ENST00000276201 OR52Z1P0C646 297 aa11.25□□□□□ -0.61
UPF3B-201ENST00000276201 FAM153BP0C7A2 387 aa11.25□□□□□ -0.61
UPF3B-201ENST00000276201 SNHG28P0DPA3 235 aa11.25□□□□□ -0.61
UPF3B-201ENST00000276201 IRF5Q13568 498 aa11.25□□□□□ -0.61
UPF3B-201ENST00000276201 FAM153CQ494X1 144 aa11.25□□□□□ -0.61
UPF3B-201ENST00000276201 SLC9C1Q4G0N8 1177 aa11.25□□□□□ -0.61
UPF3B-201ENST00000276201 MORN1Q5T089 497 aa11.25□□□□□ -0.61
UPF3B-201ENST00000276201 WDR78Q5VTH9 848 aa11.25□□□□□ -0.61
UPF3B-201ENST00000276201 TTBK2Q6IQ55 1244 aa11.25□□□□□ -0.61
UPF3B-201ENST00000276201 FAM160B2Q86V87 743 aa11.25□□□□□ -0.61
UPF3B-201ENST00000276201 SH2D3CQ8N5H7 860 aa11.25□□□□□ -0.61
UPF3B-201ENST00000276201 USP38Q8NB14 1042 aa11.25□□□□□ -0.61
UPF3B-201ENST00000276201 PNMA1Q8ND90 353 aa11.25□□□□□ -0.61
UPF3B-201ENST00000276201 SHCBP1Q8NEM2 672 aa11.25□□□□□ -0.61
UPF3B-201ENST00000276201 CYFIP2Q96F07 1278 aa11.25□□□□□ -0.61
UPF3B-201ENST00000276201 SLC38A10Q9HBR0 1119 aa11.25□□□□□ -0.61
UPF3B-201ENST00000276201 SLC40A1Q9NP59 571 aa11.25□□□□□ -0.61
UPF3B-201ENST00000276201 FAM153AQ9UHL3 310 aa11.25□□□□□ -0.61
UPF3B-201ENST00000276201 GOLGA6L10A6NI86 522 aa11.24□□□□□ -0.61
UPF3B-201ENST00000276201 DNAJC8O75937 253 aaPredicted RBP11.24□□□□□ -0.61
UPF3B-201ENST00000276201 ERCC3P19447 782 aa11.24□□□□□ -0.61
UPF3B-201ENST00000276201 MARSP56192 900 aaKnown RBP11.24□□□□□ -0.61
UPF3B-201ENST00000276201 ASIC1P78348 528 aa11.24□□□□□ -0.61
UPF3B-201ENST00000276201 GUCY1A3Q02108 690 aa11.24□□□□□ -0.61
UPF3B-201ENST00000276201 GUCY2DQ02846 1103 aa11.24□□□□□ -0.61
UPF3B-201ENST00000276201 EHHADHQ08426 723 aa11.24□□□□□ -0.61
UPF3B-201ENST00000276201 ZNF543Q08ER8 600 aa11.24□□□□□ -0.61
UPF3B-201ENST00000276201 IKQ13123 557 aaPredicted RBP11.24□□□□□ -0.61
UPF3B-201ENST00000276201 LRRC55Q6ZSA7 311 aa11.24□□□□□ -0.61
UPF3B-201ENST00000276201 CCDC121Q6ZUS5 278 aa11.24□□□□□ -0.61
UPF3B-201ENST00000276201 ACTRT1Q8TDG2 376 aa11.24□□□□□ -0.61
UPF3B-201ENST00000276201 SCFD2Q8WU76 684 aa11.24□□□□□ -0.61
UPF3B-201ENST00000276201 CHURC1Q8WUH1 139 aa11.24□□□□□ -0.61
UPF3B-201ENST00000276201 USP6NLQ92738 828 aa11.24□□□□□ -0.61
UPF3B-201ENST00000276201 BARHL2Q9NY43 387 aa11.24□□□□□ -0.61
UPF3B-201ENST00000276201 TULP1O00294 542 aaPredicted RBP11.24□□□□□ -0.61
UPF3B-201ENST00000276201 ADAMTS3O15072 1205 aa11.24□□□□□ -0.61
UPF3B-201ENST00000276201 ADCY3O60266 1144 aa11.24□□□□□ -0.61
UPF3B-201ENST00000276201 ZBED4O75132 1171 aa11.24□□□□□ -0.61
UPF3B-201ENST00000276201 ELNP15502 786 aa11.24□□□□□ -0.61
UPF3B-201ENST00000276201 SMARCA1P28370 1054 aa11.24□□□□□ -0.61
UPF3B-201ENST00000276201 GRK4P32298 578 aa11.24□□□□□ -0.61
UPF3B-201ENST00000276201 STAT3P40763 770 aa11.24□□□□□ -0.61
UPF3B-201ENST00000276201 ATP1A2P50993 1020 aa11.24□□□□□ -0.61
UPF3B-201ENST00000276201 XRCC4Q13426 336 aa11.24□□□□□ -0.61
UPF3B-201ENST00000276201 RRAGAQ7L523 313 aa11.24□□□□□ -0.61
UPF3B-201ENST00000276201 RIOX2Q8IUF8 465 aa11.24□□□□□ -0.61
UPF3B-201ENST00000276201 GPATCH11Q8N954 259 aa11.24□□□□□ -0.61
UPF3B-201ENST00000276201 RASSF8Q8NHQ8 419 aa11.24□□□□□ -0.61
UPF3B-201ENST00000276201 SOCS4Q8WXH5 440 aa11.24□□□□□ -0.61
UPF3B-201ENST00000276201 SEC14L1Q92503 715 aa11.24□□□□□ -0.61
UPF3B-201ENST00000276201 SGSM3Q96HU1 749 aa11.24□□□□□ -0.61
UPF3B-201ENST00000276201 ZNF333Q96JL9 665 aa11.24□□□□□ -0.61
UPF3B-201ENST00000276201 NUDT12Q9BQG2 462 aa11.24□□□□□ -0.61
UPF3B-201ENST00000276201 KDM4CQ9H3R0 1056 aa11.24□□□□□ -0.61
UPF3B-201ENST00000276201 GPCPD1Q9NPB8 672 aa11.24□□□□□ -0.61
UPF3B-201ENST00000276201 PRR12Q9ULL5 1215 aa11.24□□□□□ -0.61
UPF3B-201ENST00000276201 PLAAQ9Y263 795 aa11.24□□□□□ -0.61
UPF3B-201ENST00000276201 ZNF236Q9UL36 1845 aa11.23□□□□□ -0.61
UPF3B-201ENST00000276201 SLC15A5A6NIM6 579 aa11.23□□□□□ -0.61
UPF3B-201ENST00000276201 GCOM1H8Y6P7 765 aaPredicted RBP11.23□□□□□ -0.61
UPF3B-201ENST00000276201 STXBP3O00186 592 aa11.23□□□□□ -0.61
UPF3B-201ENST00000276201 ATP2A1O14983 1001 aa11.23□□□□□ -0.61
UPF3B-201ENST00000276201 EPHB6O15197 1021 aa11.23□□□□□ -0.61
UPF3B-201ENST00000276201 SLC26A4O43511 780 aa11.23□□□□□ -0.61
UPF3B-201ENST00000276201 NCK2O43639 380 aa11.23□□□□□ -0.61
UPF3B-201ENST00000276201 MYZAPP0CAP1 466 aa11.23□□□□□ -0.61
UPF3B-201ENST00000276201 SLC8A1P32418 973 aa11.23□□□□□ -0.61
UPF3B-201ENST00000276201 ELF1P32519 619 aa11.23□□□□□ -0.61
UPF3B-201ENST00000276201 SLC16A2P36021 539 aa11.23□□□□□ -0.61
UPF3B-201ENST00000276201 GRB14Q14449 540 aa11.23□□□□□ -0.61
UPF3B-201ENST00000276201 BTNL9Q6UXG8 535 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms