RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 TAGAPQ8N103 731 aa9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 CCNYL1Q8N7R7 359 aa9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 CABLES1Q8TDN4 633 aa9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 MAGED2Q9UNF1 606 aaPredicted RBP9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 FAM95CA0A1B0GW59 222 aa9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 KCNJ6P48051 423 aa9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 HSPA13P48723 471 aa9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 BCAMP50895 628 aa9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 HORMAD1Q86X24 394 aa9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 ABI1Q8IZP0 508 aa9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 C8orf37Q96NL8 207 aa9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 PITPNM2Q9BZ72 1349 aa9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 RANBP17Q9H2T7 1088 aaKnown RBP9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 LMCD1Q9NZU5 365 aa9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 IP6K2Q9UHH9 426 aa9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 TCOF1Q13428 1488 aaKnown RBP9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 E7ENQ6 273 aa9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 PDE8BO95263 885 aa9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 KCNA3P22001 575 aa9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 GYG1P46976 350 aa9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 AP3B2Q13367 1082 aa9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 KRT72Q14CN4 511 aa9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 KIAA1755Q5JYT7 1200 aa9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 TMED8Q6PL24 325 aaPredicted RBP9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 PPM1NQ8N819 430 aa9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 MOV10L1Q9BXT6 1211 aaKnown RBP9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 ATG3Q9NT62 314 aa9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 NDUFA13Q9P0J0 144 aa9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 PDP2Q9P2J9 529 aa9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 ADGRG1Q9Y653 693 aa9.26□□□□□ -0.93
SCUBE3-201ENST00000274938 PPIP5K2O43314 1243 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 RUNX1T1Q06455 604 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 ZNF667Q5HYK9 610 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 C16orf89Q6UX73 402 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 NCAPG2Q86XI2 1143 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 ALKBH8Q96BT7 664 aaKnown RBP9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 APOL6Q9BWW8 343 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 BFARQ9NZS9 450 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 LZTS1Q9Y250 596 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 SYCP2Q9BX26 1530 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 A0A1W2PQC6 194 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 LRRC53A6NM62 1247 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 KRT14P02533 472 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 KITP10721 976 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 HSPA2P54652 639 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 NSUN2Q08J23 767 aaKnown RBP eCLIP9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 MTHFD1LQ6UB35 978 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 C7orf31Q8N865 590 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 TUBGCP3Q96CW5 907 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 PIGSQ96S52 555 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 GID8Q9NWU2 228 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 CAB39Q9Y376 341 aaPredicted RBP9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 TBX22Q9Y458 520 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 STK36Q9NRP7 1315 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 AP3B1O00203 1094 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 CD58P19256 250 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 SERPINB1P30740 379 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 CHRNDQ07001 517 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 PTPN21Q16825 1174 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 ZNF473Q8WTR7 871 aaKnown RBP9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 MSTO1Q9BUK6 570 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 FSD1LQ9BXM9 530 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 PSD3Q9NYI0 1048 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 SEL1LQ9UBV2 794 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 PCDHB6Q9Y5E3 794 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 GOLGA8TH3BQL2 631 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 ADD2P35612 726 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 PDIA2Q13087 525 aaKnown RBP9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 HABP4Q5JVS0 413 aaKnown RBP9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 AGBL2Q5U5Z8 902 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 RASGRP4Q8TDF6 673 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 SGSM3Q96HU1 749 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 KDM4CQ9H3R0 1056 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 ATP6V0A4Q9HBG4 840 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 FBXL5Q9UKA1 691 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 SHANK2Q9UPX8 1470 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 GOLGA8JA6NMD2 632 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 HSPA1AP0DMV8 641 aaKnown RBP9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 HSPA1BP0DMV9 641 aaKnown RBP9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 DDIT3P35638 169 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 TAP1Q03518 808 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 KRR1Q13601 381 aaKnown RBP9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 CCDC85BQ15834 202 aaPredicted RBP9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 TRIM72Q6ZMU5 477 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 TRIM69Q86WT6 500 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 ZNF564Q8TBZ8 553 aaPredicted RBP9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 DNAJC9Q8WXX5 260 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 MRPS26Q9BYN8 205 aaKnown RBP9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 EIF3HO15372 352 aaKnown RBP eCLIP9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 TBC1D4O60343 1298 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 SRGAP2O75044 1071 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 MECOMQ03112 1051 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 CYTH1Q15438 398 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 ADRM1Q16186 407 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 TMC4Q7Z404 712 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 CYP4F11Q9HBI6 524 aa9.25□□□□□ -0.93
SCUBE3-201ENST00000274938 ITSN2Q9NZM3 1697 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 CCDC195A0A1B0GUA6 201 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 TBXAS1P24557 533 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms