RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 ARGLU1Q9NWB6 273 aaPredicted RBP10.15□□□□□ -0.78
SSR3-201ENST00000265044 HSPBP1Q9NZL4 362 aa10.15□□□□□ -0.78
SSR3-201ENST00000265044 DBR1Q9UK59 544 aaKnown RBP10.15□□□□□ -0.78
SSR3-201ENST00000265044 ITIH6Q6UXX5 1313 aa10.15□□□□□ -0.78
SSR3-201ENST00000265044 SPATA31C2B4DYI2 1134 aa10.15□□□□□ -0.78
SSR3-201ENST00000265044 VAMP7P51809 220 aa10.15□□□□□ -0.78
SSR3-201ENST00000265044 TRPC3Q13507 836 aa10.15□□□□□ -0.78
SSR3-201ENST00000265044 TFDP1Q14186 410 aa10.15□□□□□ -0.78
SSR3-201ENST00000265044 ODF2Q5BJF6 829 aa10.15□□□□□ -0.78
SSR3-201ENST00000265044 RAD9BQ6WBX8 426 aa10.15□□□□□ -0.78
SSR3-201ENST00000265044 PLEKHH3Q7Z736 793 aa10.15□□□□□ -0.78
SSR3-201ENST00000265044 CBWD1Q9BRT8 395 aa10.15□□□□□ -0.78
SSR3-201ENST00000265044 TIPINQ9BVW5 301 aa10.15□□□□□ -0.78
SSR3-201ENST00000265044 SMARCAD1Q9H4L7 1026 aa10.15□□□□□ -0.78
SSR3-201ENST00000265044 USP20Q9Y2K6 914 aa10.15□□□□□ -0.78
SSR3-201ENST00000265044 ZNF233A6NK53 670 aa10.15□□□□□ -0.79
SSR3-201ENST00000265044 ATP2A1O14983 1001 aa10.15□□□□□ -0.79
SSR3-201ENST00000265044 CLDN3O15551 220 aa10.15□□□□□ -0.79
SSR3-201ENST00000265044 GFPT2O94808 682 aa10.15□□□□□ -0.79
SSR3-201ENST00000265044 MAPK6Q16659 721 aa10.15□□□□□ -0.79
SSR3-201ENST00000265044 ANO5Q75V66 913 aa10.15□□□□□ -0.79
SSR3-201ENST00000265044 THNSL1Q8IYQ7 743 aa10.15□□□□□ -0.79
SSR3-201ENST00000265044 ZNF507Q8TCN5 953 aa10.15□□□□□ -0.79
SSR3-201ENST00000265044 NLRP7Q8WX94 980 aa10.15□□□□□ -0.79
SSR3-201ENST00000265044 SECISBP2LQ93073 1101 aaKnown RBP10.15□□□□□ -0.79
SSR3-201ENST00000265044 MSTO1Q9BUK6 570 aa10.15□□□□□ -0.79
SSR3-201ENST00000265044 TRIM6Q9C030 488 aaPredicted RBP10.15□□□□□ -0.79
SSR3-201ENST00000265044 UBE2TQ9NPD8 197 aaPredicted RBP10.15□□□□□ -0.79
SSR3-201ENST00000265044 ADGRG1Q9Y653 693 aa10.15□□□□□ -0.79
SSR3-201ENST00000265044 POLR2AP24928 1970 aaKnown RBP10.14□□□□□ -0.79
SSR3-201ENST00000265044 CDK5RAP2Q96SN8 1893 aa10.14□□□□□ -0.79
SSR3-201ENST00000265044 SOWAHBA6NEL2 793 aa10.14□□□□□ -0.79
SSR3-201ENST00000265044 TISP43B9A030 160 aa10.14□□□□□ -0.79
SSR3-201ENST00000265044 DHX15O43143 795 aaKnown RBP10.14□□□□□ -0.79
SSR3-201ENST00000265044 N4BP1O75113 896 aaKnown RBP10.14□□□□□ -0.79
SSR3-201ENST00000265044 KCNA2P16389 499 aa10.14□□□□□ -0.79
SSR3-201ENST00000265044 SSR1P43307 286 aaKnown RBP10.14□□□□□ -0.79
SSR3-201ENST00000265044 ERGIC2Q96RQ1 377 aa10.14□□□□□ -0.79
SSR3-201ENST00000265044 IRX2Q9BZI1 471 aaPredicted RBP10.14□□□□□ -0.79
SSR3-201ENST00000265044 HAUS4Q9H6D7 363 aa10.14□□□□□ -0.79
SSR3-201ENST00000265044 SPC25Q9HBM1 224 aa10.14□□□□□ -0.79
SSR3-201ENST00000265044 EMSYQ7Z589 1322 aa10.14□□□□□ -0.79
SSR3-201ENST00000265044 BUB1O43683 1085 aa10.14□□□□□ -0.79
SSR3-201ENST00000265044 STRNO43815 780 aa10.14□□□□□ -0.79
SSR3-201ENST00000265044 ERLIN2O94905 339 aa10.14□□□□□ -0.79
SSR3-201ENST00000265044 GH1P01241 217 aa10.14□□□□□ -0.79
SSR3-201ENST00000265044 ABCB4P21439 1286 aa10.14□□□□□ -0.79
SSR3-201ENST00000265044 KIF11P52732 1056 aa10.14□□□□□ -0.79
SSR3-201ENST00000265044 FKBP1BP68106 108 aa10.14□□□□□ -0.79
SSR3-201ENST00000265044 FSTL1Q12841 308 aa10.14□□□□□ -0.79
SSR3-201ENST00000265044 KIAA0753Q2KHM9 967 aa10.14□□□□□ -0.79
SSR3-201ENST00000265044 LMBRD2Q68DH5 695 aaPredicted RBP10.14□□□□□ -0.79
SSR3-201ENST00000265044 DPH6Q7L8W6 267 aa10.14□□□□□ -0.79
SSR3-201ENST00000265044 OR6J1Q8NGC5 347 aa10.14□□□□□ -0.79
SSR3-201ENST00000265044 U2AF1L4Q8WU68 220 aaKnown RBP10.14□□□□□ -0.79
SSR3-201ENST00000265044 TCP11Q8WWU5 503 aa10.14□□□□□ -0.79
SSR3-201ENST00000265044 SENP7Q9BQF6 1050 aa10.14□□□□□ -0.79
SSR3-201ENST00000265044 CARD6Q9BX69 1037 aa10.14□□□□□ -0.79
SSR3-201ENST00000265044 CEP72Q9P209 647 aa10.14□□□□□ -0.79
SSR3-201ENST00000265044 PAFAH1B1P43034 410 aa10.14□□□□□ -0.79
SSR3-201ENST00000265044 ACOT2P49753 483 aa10.14□□□□□ -0.79
SSR3-201ENST00000265044 HSP90AA2PQ14568 343 aaPredicted RBP10.14□□□□□ -0.79
SSR3-201ENST00000265044 KIF22Q14807 665 aa10.14□□□□□ -0.79
SSR3-201ENST00000265044 CHADLQ6NUI6 762 aa10.14□□□□□ -0.79
SSR3-201ENST00000265044 LRRC55Q6ZSA7 311 aa10.14□□□□□ -0.79
SSR3-201ENST00000265044 EXOC8Q8IYI6 725 aa10.14□□□□□ -0.79
SSR3-201ENST00000265044 NAPGQ99747 312 aaPredicted RBP10.14□□□□□ -0.79
SSR3-201ENST00000265044 ZFYVE28Q9HCC9 887 aa10.14□□□□□ -0.79
SSR3-201ENST00000265044 PDGFCQ9NRA1 345 aa10.14□□□□□ -0.79
SSR3-201ENST00000265044 TBX20Q9UMR3 447 aa10.14□□□□□ -0.79
SSR3-201ENST00000265044 KCNH4Q9UQ05 1017 aa10.14□□□□□ -0.79
SSR3-201ENST00000265044 TRAF3IP3Q9Y228 551 aa10.14□□□□□ -0.79
SSR3-201ENST00000265044 RPTORQ8N122 1335 aa10.13□□□□□ -0.79
SSR3-201ENST00000265044 ZC3H4Q9UPT8 1303 aaKnown RBP10.13□□□□□ -0.79
SSR3-201ENST00000265044 BFSP1Q12934 665 aa10.13□□□□□ -0.79
SSR3-201ENST00000265044 PRPF4BQ13523 1007 aaKnown RBP10.13□□□□□ -0.79
SSR3-201ENST00000265044 PTPROQ16827 1216 aa10.13□□□□□ -0.79
SSR3-201ENST00000265044 HSDL1Q3SXM5 330 aa10.13□□□□□ -0.79
SSR3-201ENST00000265044 TAF3Q5VWG9 929 aa10.13□□□□□ -0.79
SSR3-201ENST00000265044 SLC35F6Q8N357 371 aa10.13□□□□□ -0.79
SSR3-201ENST00000265044 AFG1LQ8WV93 481 aa10.13□□□□□ -0.79
SSR3-201ENST00000265044 BRI3BPQ8WY22 251 aa10.13□□□□□ -0.79
SSR3-201ENST00000265044 TARS2Q9BW92 718 aaKnown RBP10.13□□□□□ -0.79
SSR3-201ENST00000265044 TSGA10Q9BZW7 698 aa10.13□□□□□ -0.79
SSR3-201ENST00000265044 SUCLA2Q9P2R7 463 aaPredicted RBP10.13□□□□□ -0.79
SSR3-201ENST00000265044 DNAJC12Q9UKB3 198 aa10.13□□□□□ -0.79
SSR3-201ENST00000265044 NOD1Q9Y239 953 aa10.13□□□□□ -0.79
SSR3-201ENST00000265044 MYH7BA7E2Y1 1941 aa10.13□□□□□ -0.79
SSR3-201ENST00000265044 ENC1O14682 589 aa10.13□□□□□ -0.79
SSR3-201ENST00000265044 ADCYAP1R1P41586 468 aa10.13□□□□□ -0.79
SSR3-201ENST00000265044 APBA1Q02410 837 aa10.13□□□□□ -0.79
SSR3-201ENST00000265044 SPRYD7Q5W111 196 aa10.13□□□□□ -0.79
SSR3-201ENST00000265044 CCDC170Q8IYT3 715 aa10.13□□□□□ -0.79
SSR3-201ENST00000265044 REPS2Q8NFH8 660 aa10.13□□□□□ -0.79
SSR3-201ENST00000265044 ERAP1Q9NZ08 941 aa10.13□□□□□ -0.79
SSR3-201ENST00000265044 ZNF862O60290 1169 aa10.12□□□□□ -0.79
SSR3-201ENST00000265044 MAPK4P31152 587 aa10.12□□□□□ -0.79
SSR3-201ENST00000265044 TFAMQ00059 246 aaKnown RBP10.12□□□□□ -0.79
SSR3-201ENST00000265044 LAMC2Q13753 1193 aa10.12□□□□□ -0.79
SSR3-201ENST00000265044 SNRNP35Q16560 246 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms