RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 KLHL14Q9P2G3 628 aa12.42□□□□□ -0.42
TROAP-201ENST00000257909 PCYOX1Q9UHG3 505 aa12.42□□□□□ -0.42
TROAP-201ENST00000257909 SYNGAP1Q96PV0 1343 aa12.41□□□□□ -0.42
TROAP-201ENST00000257909 UNC5CO95185 931 aa12.41□□□□□ -0.42
TROAP-201ENST00000257909 PTGIRP43119 386 aa12.41□□□□□ -0.42
TROAP-201ENST00000257909 ECM1Q16610 540 aa12.41□□□□□ -0.42
TROAP-201ENST00000257909 SLC30A5Q8TAD4 765 aa12.41□□□□□ -0.42
TROAP-201ENST00000257909 TXLNGQ9NUQ3 528 aa12.41□□□□□ -0.42
TROAP-201ENST00000257909 DBR1Q9UK59 544 aaKnown RBP12.41□□□□□ -0.42
TROAP-201ENST00000257909 TRAF3IP3Q9Y228 551 aa12.41□□□□□ -0.42
TROAP-201ENST00000257909 SH3BP1Q9Y3L3 701 aa12.41□□□□□ -0.42
TROAP-201ENST00000257909 TMEM120BA0PK00 339 aa12.41□□□□□ -0.42
TROAP-201ENST00000257909 LRRD1A4D1F6 860 aa12.41□□□□□ -0.42
TROAP-201ENST00000257909 ATP5HO75947 161 aa12.41□□□□□ -0.42
TROAP-201ENST00000257909 STAT1P42224 750 aa12.41□□□□□ -0.42
TROAP-201ENST00000257909 RPL21P46778 160 aaKnown RBP12.41□□□□□ -0.42
TROAP-201ENST00000257909 EPHA7Q15375 998 aa12.41□□□□□ -0.42
TROAP-201ENST00000257909 PARP6Q2NL67 630 aa12.41□□□□□ -0.42
TROAP-201ENST00000257909 TRMT10CQ7L0Y3 403 aaKnown RBP12.41□□□□□ -0.42
TROAP-201ENST00000257909 FBXO33Q7Z6M2 555 aa12.41□□□□□ -0.42
TROAP-201ENST00000257909 ADAT2Q7Z6V5 191 aaKnown RBP12.41□□□□□ -0.42
TROAP-201ENST00000257909 MFN1Q8IWA4 741 aa12.41□□□□□ -0.42
TROAP-201ENST00000257909 CKAP2Q8WWK9 683 aa12.41□□□□□ -0.42
TROAP-201ENST00000257909 GRAMD1AQ96CP6 724 aa12.41□□□□□ -0.42
TROAP-201ENST00000257909 DYNLL2Q96FJ2 89 aa12.41□□□□□ -0.42
TROAP-201ENST00000257909 SERPINB12Q96P63 405 aa12.41□□□□□ -0.42
TROAP-201ENST00000257909 TSC22D3Q99576 134 aa12.41□□□□□ -0.42
TROAP-201ENST00000257909 FAM167BQ9BTA0 163 aa12.41□□□□□ -0.42
TROAP-201ENST00000257909 MXD3Q9BW11 206 aa12.41□□□□□ -0.42
TROAP-201ENST00000257909 METTL14Q9HCE5 456 aaKnown RBP12.41□□□□□ -0.42
TROAP-201ENST00000257909 PNMA3Q9UL41 463 aa12.41□□□□□ -0.42
TROAP-201ENST00000257909 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.41□□□□□ -0.42
TROAP-201ENST00000257909 MAST2Q6P0Q8 1798 aa12.4□□□□□ -0.42
TROAP-201ENST00000257909 WNK3Q9BYP7 1800 aa12.4□□□□□ -0.42
TROAP-201ENST00000257909 GTPBP10A4D1E9 387 aaKnown RBP12.4□□□□□ -0.42
TROAP-201ENST00000257909 GNAZP19086 355 aa12.4□□□□□ -0.42
TROAP-201ENST00000257909 VCAM1P19320 739 aa12.4□□□□□ -0.42
TROAP-201ENST00000257909 FGFR4P22455 802 aa12.4□□□□□ -0.42
TROAP-201ENST00000257909 COPB2P35606 906 aa12.4□□□□□ -0.42
TROAP-201ENST00000257909 CTCFP49711 727 aaPredicted RBP12.4□□□□□ -0.42
TROAP-201ENST00000257909 PAPOLAP51003 745 aaKnown RBP12.4□□□□□ -0.42
TROAP-201ENST00000257909 ACVR2BQ13705 512 aa12.4□□□□□ -0.42
TROAP-201ENST00000257909 LRRC14Q15048 493 aa12.4□□□□□ -0.42
TROAP-201ENST00000257909 SLC4A8Q2Y0W8 1093 aa12.4□□□□□ -0.42
TROAP-201ENST00000257909 THEMIS2Q5TEJ8 643 aa12.4□□□□□ -0.42
TROAP-201ENST00000257909 ARHGEF2Q92974 986 aaKnown RBP12.4□□□□□ -0.42
TROAP-201ENST00000257909 CPVLQ9H3G5 476 aa12.4□□□□□ -0.42
TROAP-201ENST00000257909 RNPEPL1Q9HAU8 725 aa12.4□□□□□ -0.42
TROAP-201ENST00000257909 USP40Q9NVE5 1235 aa12.4□□□□□ -0.42
TROAP-201ENST00000257909 PITPNM2Q9BZ72 1349 aa12.4□□□□□ -0.42
TROAP-201ENST00000257909 SLC26A4O43511 780 aa12.4□□□□□ -0.42
TROAP-201ENST00000257909 GGPS1O95749 300 aa12.4□□□□□ -0.42
TROAP-201ENST00000257909 CALB2P22676 271 aa12.4□□□□□ -0.42
TROAP-201ENST00000257909 TRAF1Q13077 416 aa12.4□□□□□ -0.42
TROAP-201ENST00000257909 LBRQ14739 615 aaKnown RBP12.4□□□□□ -0.42
TROAP-201ENST00000257909 CYFIP1Q7L576 1253 aa12.4□□□□□ -0.42
TROAP-201ENST00000257909 UHMK1Q8TAS1 419 aaKnown RBP12.4□□□□□ -0.42
TROAP-201ENST00000257909 LNX1Q8TBB1 728 aaPredicted RBP12.4□□□□□ -0.42
TROAP-201ENST00000257909 MGARPQ8TDB4 240 aa12.4□□□□□ -0.42
TROAP-201ENST00000257909 C18orf8Q96DM3 657 aa12.4□□□□□ -0.42
TROAP-201ENST00000257909 PIGSQ96S52 555 aa12.4□□□□□ -0.42
TROAP-201ENST00000257909 ZNF287Q9HBT7 754 aa12.4□□□□□ -0.42
TROAP-201ENST00000257909 ETNK1Q9HBU6 452 aa12.4□□□□□ -0.42
TROAP-201ENST00000257909 SIX2Q9NPC8 291 aa12.4□□□□□ -0.42
TROAP-201ENST00000257909 BSDC1Q9NW68 430 aaPredicted RBP12.4□□□□□ -0.42
TROAP-201ENST00000257909 CTNNAL1Q9UBT7 734 aa12.4□□□□□ -0.42
TROAP-201ENST00000257909 MIF4GDA9UHW6 222 aaKnown RBP12.39□□□□□ -0.43
TROAP-201ENST00000257909 CALUO43852 315 aaPredicted RBP12.39□□□□□ -0.43
TROAP-201ENST00000257909 NPTXRO95502 500 aa12.39□□□□□ -0.43
TROAP-201ENST00000257909 NTSR2O95665 410 aa12.39□□□□□ -0.43
TROAP-201ENST00000257909 PLA2G4BP0C869 781 aa12.39□□□□□ -0.43
TROAP-201ENST00000257909 ADCY7P51828 1080 aa12.39□□□□□ -0.43
TROAP-201ENST00000257909 DCAF17Q5H9S7 520 aaPredicted RBP12.39□□□□□ -0.43
TROAP-201ENST00000257909 GPBP1Q86WP2 473 aa12.39□□□□□ -0.43
TROAP-201ENST00000257909 ART4Q93070 314 aa12.39□□□□□ -0.43
TROAP-201ENST00000257909 ARHGEF10LQ9HCE6 1279 aa12.39□□□□□ -0.43
TROAP-201ENST00000257909 PAPOLBQ9NRJ5 636 aaKnown RBP12.39□□□□□ -0.43
TROAP-201ENST00000257909 GCNT4Q9P109 453 aa12.39□□□□□ -0.43
TROAP-201ENST00000257909 MPHOSPH10O00566 681 aaKnown RBP12.39□□□□□ -0.43
TROAP-201ENST00000257909 MARCH6O60337 910 aa12.39□□□□□ -0.43
TROAP-201ENST00000257909 SMIM24O75264 130 aa12.39□□□□□ -0.43
TROAP-201ENST00000257909 ATP6V1C1P21283 382 aa12.39□□□□□ -0.43
TROAP-201ENST00000257909 CTNNA2P26232 953 aa12.39□□□□□ -0.43
TROAP-201ENST00000257909 PRDX5P30044 214 aa12.39□□□□□ -0.43
TROAP-201ENST00000257909 RAB27AP51159 221 aa12.39□□□□□ -0.43
TROAP-201ENST00000257909 EVA1CP58658 441 aa12.39□□□□□ -0.43
TROAP-201ENST00000257909 ROR2Q01974 943 aaKnown RBP12.39□□□□□ -0.43
TROAP-201ENST00000257909 ZNF211Q13398 564 aaPredicted RBP12.39□□□□□ -0.43
TROAP-201ENST00000257909 SGSM1Q2NKQ1 1148 aa12.39□□□□□ -0.43
TROAP-201ENST00000257909 CWF19L1Q69YN2 538 aaKnown RBP12.39□□□□□ -0.43
TROAP-201ENST00000257909 AGGF1Q8N302 714 aaeCLIP12.39□□□□□ -0.43
TROAP-201ENST00000257909 UBL4BQ8N7F7 174 aa12.39□□□□□ -0.43
TROAP-201ENST00000257909 VAT1LQ9HCJ6 419 aa12.39□□□□□ -0.43
TROAP-201ENST00000257909 PCDHA3Q9Y5H8 950 aa12.39□□□□□ -0.43
TROAP-201ENST00000257909 DPPA5A6NC42 116 aa12.38□□□□□ -0.43
TROAP-201ENST00000257909 PDXKO00764 312 aa12.38□□□□□ -0.43
TROAP-201ENST00000257909 EDIL3O43854 480 aa12.38□□□□□ -0.43
TROAP-201ENST00000257909 KRT18P05783 430 aaKnown RBP12.38□□□□□ -0.43
TROAP-201ENST00000257909 ALAS1P13196 640 aa12.38□□□□□ -0.43
TROAP-201ENST00000257909 CYP11B2P19099 503 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms