RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 KATNBL1Q9H079 304 aa20.7■□□□□ 0.9
TRIM47-201ENST00000254816 ST6GALNAC4Q9H4F1 302 aa20.7■□□□□ 0.9
TRIM47-201ENST00000254816 TMEM206Q9H813 350 aa20.7■□□□□ 0.9
TRIM47-201ENST00000254816 NRBP2Q9NSY0 501 aa20.7■□□□□ 0.9
TRIM47-201ENST00000254816 ABT1Q9ULW3 272 aaKnown RBP20.7■□□□□ 0.9
TRIM47-201ENST00000254816 TLL2Q9Y6L7 1015 aa20.7■□□□□ 0.9
TRIM47-201ENST00000254816 DENND3A2RUS2 1198 aa20.7■□□□□ 0.9
TRIM47-201ENST00000254816 SLC16A3O15427 465 aaKnown RBP20.7■□□□□ 0.9
TRIM47-201ENST00000254816 TCERG1LQ5VWI1 586 aa20.7■□□□□ 0.9
TRIM47-201ENST00000254816 MAMDC4Q6UXC1 1216 aa20.7■□□□□ 0.9
TRIM47-201ENST00000254816 RAD9BQ6WBX8 426 aa20.7■□□□□ 0.9
TRIM47-201ENST00000254816 RDH13Q8NBN7 331 aa20.7■□□□□ 0.9
TRIM47-201ENST00000254816 ZIC5Q96T25 663 aa20.7■□□□□ 0.9
TRIM47-201ENST00000254816 NUP58Q9BVL2 599 aa20.7■□□□□ 0.9
TRIM47-201ENST00000254816 DHX33Q9H6R0 707 aaKnown RBP20.7■□□□□ 0.9
TRIM47-201ENST00000254816 VTA1Q9NP79 307 aa20.7■□□□□ 0.9
TRIM47-201ENST00000254816 DMAC2Q9NW81 257 aa20.7■□□□□ 0.9
TRIM47-201ENST00000254816 ARHGAP1Q07960 439 aa20.69■□□□□ 0.9
TRIM47-201ENST00000254816 GLIPR1L2Q4G1C9 344 aa20.69■□□□□ 0.9
TRIM47-201ENST00000254816 ZNF467Q7Z7K2 595 aaPredicted RBP20.69■□□□□ 0.9
TRIM47-201ENST00000254816 FAM186BQ8IYM0 893 aa20.69■□□□□ 0.9
TRIM47-201ENST00000254816 DESI2Q9BSY9 194 aa20.69■□□□□ 0.9
TRIM47-201ENST00000254816 FAM184BQ9ULE4 1060 aa20.69■□□□□ 0.9
TRIM47-201ENST00000254816 TBX20Q9UMR3 447 aa20.69■□□□□ 0.9
TRIM47-201ENST00000254816 LGR5O75473 907 aa20.69■□□□□ 0.9
TRIM47-201ENST00000254816 XRCC5P13010 732 aaKnown RBP20.69■□□□□ 0.9
TRIM47-201ENST00000254816 PSMC2P35998 433 aaKnown RBP20.69■□□□□ 0.9
TRIM47-201ENST00000254816 APBA1Q02410 837 aa20.69■□□□□ 0.9
TRIM47-201ENST00000254816 TARBP2Q15633 366 aaKnown RBP20.69■□□□□ 0.9
TRIM47-201ENST00000254816 REXO1L1PQ8IX06 675 aa20.69■□□□□ 0.9
TRIM47-201ENST00000254816 ZSWIM2Q8NEG5 633 aa20.69■□□□□ 0.9
TRIM47-201ENST00000254816 BORCS6Q96GS4 357 aa20.69■□□□□ 0.9
TRIM47-201ENST00000254816 CBWD1Q9BRT8 395 aa20.69■□□□□ 0.9
TRIM47-201ENST00000254816 ZNF236Q9UL36 1845 aa20.69■□□□□ 0.9
TRIM47-201ENST00000254816 OR8K1Q8NGG5 319 aa20.68■□□□□ 0.9
TRIM47-201ENST00000254816 ASAP3Q8TDY4 903 aa20.68■□□□□ 0.9
TRIM47-201ENST00000254816 SPIRE2Q8WWL2 714 aa20.68■□□□□ 0.9
TRIM47-201ENST00000254816 SLC7A3Q8WY07 619 aa20.68■□□□□ 0.9
TRIM47-201ENST00000254816 CHP1Q99653 195 aa20.68■□□□□ 0.9
TRIM47-201ENST00000254816 SLC15A5A6NIM6 579 aa20.67■□□□□ 0.9
TRIM47-201ENST00000254816 EXOC3O60645 756 aa20.67■□□□□ 0.9
TRIM47-201ENST00000254816 RETREG2Q8NC44 543 aa20.67■□□□□ 0.9
TRIM47-201ENST00000254816 GOLGA5Q8TBA6 731 aa20.67■□□□□ 0.9
TRIM47-201ENST00000254816 EVPLQ92817 2033 aa20.67■□□□□ 0.9
TRIM47-201ENST00000254816 IFT74Q96LB3 600 aa20.67■□□□□ 0.9
TRIM47-201ENST00000254816 NTPCRQ9BSD7 190 aaKnown RBP20.67■□□□□ 0.9
TRIM47-201ENST00000254816 TINF2Q9BSI4 451 aa20.67■□□□□ 0.9
TRIM47-201ENST00000254816 NAA15Q9BXJ9 866 aaKnown RBP20.67■□□□□ 0.9
TRIM47-201ENST00000254816 C17orf75Q9HAS0 396 aa20.67■□□□□ 0.9
TRIM47-201ENST00000254816 METTL14Q9HCE5 456 aaKnown RBP20.67■□□□□ 0.9
TRIM47-201ENST00000254816 DNAI1Q9UI46 699 aa20.67■□□□□ 0.9
TRIM47-201ENST00000254816 PCNTO95613 3336 aa20.67■□□□□ 0.9
TRIM47-201ENST00000254816 ANKRD63C9JTQ0 380 aa20.67■□□□□ 0.9
TRIM47-201ENST00000254816 KIF3CO14782 793 aa20.67■□□□□ 0.9
TRIM47-201ENST00000254816 AFPP02771 609 aaKnown RBP20.67■□□□□ 0.9
TRIM47-201ENST00000254816 PLCB4Q15147 1175 aa20.67■□□□□ 0.9
TRIM47-201ENST00000254816 C17orf99Q6UX52 265 aa20.67■□□□□ 0.9
TRIM47-201ENST00000254816 GPIHBP1Q8IV16 184 aa20.67■□□□□ 0.9
TRIM47-201ENST00000254816 SLC35C1Q96A29 364 aa20.67■□□□□ 0.9
TRIM47-201ENST00000254816 DNAJC7Q99615 494 aa20.67■□□□□ 0.9
TRIM47-201ENST00000254816 LSM14BQ9BX40 385 aaKnown RBP20.67■□□□□ 0.9
TRIM47-201ENST00000254816 ZHX1Q9UKY1 873 aaPredicted RBP20.67■□□□□ 0.9
TRIM47-201ENST00000254816 FRMD4BQ9Y2L6 1034 aa20.67■□□□□ 0.9
TRIM47-201ENST00000254816 PPP2R2CQ9Y2T4 447 aa20.67■□□□□ 0.9
TRIM47-201ENST00000254816 RBM47A0AV96 593 aaKnown RBP20.66■□□□□ 0.9
TRIM47-201ENST00000254816 CCP110O43303 1012 aa20.66■□□□□ 0.9
TRIM47-201ENST00000254816 TLR2O60603 784 aa20.66■□□□□ 0.9
TRIM47-201ENST00000254816 FECHP22830 423 aa20.66■□□□□ 0.9
TRIM47-201ENST00000254816 RTP1P59025 263 aa20.66■□□□□ 0.9
TRIM47-201ENST00000254816 DRP2Q13474 957 aa20.66■□□□□ 0.9
TRIM47-201ENST00000254816 FIGNQ5HY92 759 aa20.66■□□□□ 0.9
TRIM47-201ENST00000254816 WDR59Q6PJI9 974 aa20.66■□□□□ 0.9
TRIM47-201ENST00000254816 PLPPR4Q7Z2D5 763 aa20.66■□□□□ 0.9
TRIM47-201ENST00000254816 LRRN4CLQ8ND94 238 aa20.66■□□□□ 0.9
TRIM47-201ENST00000254816 SLC17A8Q8NDX2 589 aa20.66■□□□□ 0.9
TRIM47-201ENST00000254816 EMSYQ7Z589 1322 aa20.66■□□□□ 0.9
TRIM47-201ENST00000254816 FANCGO15287 622 aa20.66■□□□□ 0.9
TRIM47-201ENST00000254816 SLU7O95391 586 aaKnown RBP20.66■□□□□ 0.9
TRIM47-201ENST00000254816 GH1P01241 217 aa20.66■□□□□ 0.9
TRIM47-201ENST00000254816 GLRA2P23416 452 aa20.66■□□□□ 0.9
TRIM47-201ENST00000254816 ETF1P62495 437 aaKnown RBP20.66■□□□□ 0.9
TRIM47-201ENST00000254816 MORN1Q5T089 497 aa20.66■□□□□ 0.9
TRIM47-201ENST00000254816 TRIM65Q6PJ69 517 aa20.66■□□□□ 0.9
TRIM47-201ENST00000254816 PAXIP1Q6ZW49 1069 aaPredicted RBP20.66■□□□□ 0.9
TRIM47-201ENST00000254816 MAP4K3Q8IVH8 894 aa20.66■□□□□ 0.9
TRIM47-201ENST00000254816 NEK11Q8NG66 645 aa20.66■□□□□ 0.9
TRIM47-201ENST00000254816 TRAPPC12Q8WVT3 735 aa20.66■□□□□ 0.9
TRIM47-201ENST00000254816 BBXQ8WY36 941 aaPredicted RBP20.66■□□□□ 0.9
TRIM47-201ENST00000254816 ZCCHC17Q9NP64 241 aaKnown RBP20.66■□□□□ 0.9
TRIM47-201ENST00000254816 USP20Q9Y2K6 914 aa20.66■□□□□ 0.9
TRIM47-201ENST00000254816 SIP14410 1827 aa20.66■□□□□ 0.9
TRIM47-201ENST00000254816 A0A1W2PQJ5 194 aa20.65■□□□□ 0.9
TRIM47-201ENST00000254816 ARL2P36404 184 aa20.65■□□□□ 0.9
TRIM47-201ENST00000254816 ZBED6P86452 979 aa20.65■□□□□ 0.9
TRIM47-201ENST00000254816 PRAMEF19Q5SWL8 479 aa20.65■□□□□ 0.9
TRIM47-201ENST00000254816 TAS1R3Q7RTX0 852 aa20.65■□□□□ 0.9
TRIM47-201ENST00000254816 SLC9A9Q8IVB4 645 aa20.65■□□□□ 0.9
TRIM47-201ENST00000254816 ATP8B4Q8TF62 1192 aa20.65■□□□□ 0.9
TRIM47-201ENST00000254816 AFG1LQ8WV93 481 aa20.65■□□□□ 0.9
TRIM47-201ENST00000254816 UBE2Q2Q8WVN8 375 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms