RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 MORC4Q8TE76 937 aa11.84□□□□□ -0.51
KNOP1-201ENST00000219837 NR1H4Q96RI1 486 aaPredicted RBP11.84□□□□□ -0.51
KNOP1-201ENST00000219837 FMO2Q99518 471 aa11.84□□□□□ -0.51
KNOP1-201ENST00000219837 TMEM106CQ9BVX2 250 aa11.84□□□□□ -0.51
KNOP1-201ENST00000219837 C2orf40Q9H1Z8 148 aa11.84□□□□□ -0.51
KNOP1-201ENST00000219837 ADAM22Q9P0K1 906 aa11.84□□□□□ -0.51
KNOP1-201ENST00000219837 POTEMA6NI47 508 aa11.84□□□□□ -0.51
KNOP1-201ENST00000219837 MCF2P10911 925 aa11.84□□□□□ -0.51
KNOP1-201ENST00000219837 RESP18Q5W5W9 173 aa11.84□□□□□ -0.51
KNOP1-201ENST00000219837 ANKRD40Q6AI12 368 aa11.84□□□□□ -0.51
KNOP1-201ENST00000219837 TOGARAM2Q6ZUX3 1019 aa11.84□□□□□ -0.51
KNOP1-201ENST00000219837 CYFIP1Q7L576 1253 aa11.84□□□□□ -0.51
KNOP1-201ENST00000219837 ADGRF4Q8IZF3 695 aa11.84□□□□□ -0.51
KNOP1-201ENST00000219837 LINC00301Q8NCQ3 95 aa11.84□□□□□ -0.51
KNOP1-201ENST00000219837 MRPL4Q9BYD3 311 aaKnown RBP11.84□□□□□ -0.51
KNOP1-201ENST00000219837 TRPV6Q9H1D0 765 aa11.84□□□□□ -0.51
KNOP1-201ENST00000219837 ELP3Q9H9T3 547 aa11.84□□□□□ -0.51
KNOP1-201ENST00000219837 DONSONQ9NYP3 566 aa11.84□□□□□ -0.51
KNOP1-201ENST00000219837 SUN2Q9UH99 717 aa11.84□□□□□ -0.51
KNOP1-201ENST00000219837 IGSF1Q8N6C5 1336 aa11.83□□□□□ -0.52
KNOP1-201ENST00000219837 GNA15P30679 374 aa11.83□□□□□ -0.52
KNOP1-201ENST00000219837 SH3BGRP55822 239 aaPredicted RBP11.83□□□□□ -0.52
KNOP1-201ENST00000219837 ETF1P62495 437 aaKnown RBP11.83□□□□□ -0.52
KNOP1-201ENST00000219837 RCSD1Q6JBY9 416 aa11.83□□□□□ -0.52
KNOP1-201ENST00000219837 CNOT8Q9UFF9 292 aaKnown RBP11.83□□□□□ -0.52
KNOP1-201ENST00000219837 SAMD9LQ8IVG5 1584 aa11.83□□□□□ -0.52
KNOP1-201ENST00000219837 UBA6A0AVT1 1052 aaPredicted RBP11.83□□□□□ -0.52
KNOP1-201ENST00000219837 CALB1P05937 261 aa11.83□□□□□ -0.52
KNOP1-201ENST00000219837 ESRRAP11474 423 aaPredicted RBP11.83□□□□□ -0.52
KNOP1-201ENST00000219837 GCLMP48507 274 aa11.83□□□□□ -0.52
KNOP1-201ENST00000219837 SULT1E1P49888 294 aa11.83□□□□□ -0.52
KNOP1-201ENST00000219837 ARL4CP56559 192 aa11.83□□□□□ -0.52
KNOP1-201ENST00000219837 COASYQ13057 564 aa11.83□□□□□ -0.52
KNOP1-201ENST00000219837 ACAD11Q709F0 780 aa11.83□□□□□ -0.52
KNOP1-201ENST00000219837 CYB5R4Q7L1T6 521 aa11.83□□□□□ -0.52
KNOP1-201ENST00000219837 NSUN6Q8TEA1 469 aaKnown RBP11.83□□□□□ -0.52
KNOP1-201ENST00000219837 BRIP1Q9BX63 1249 aa11.83□□□□□ -0.52
KNOP1-201ENST00000219837 EIF2AQ9BY44 585 aaKnown RBP11.83□□□□□ -0.52
KNOP1-201ENST00000219837 LCMT1Q9UIC8 334 aa11.83□□□□□ -0.52
KNOP1-201ENST00000219837 HSP90AA5PQ58FG0 334 aa11.83□□□□□ -0.52
KNOP1-201ENST00000219837 SCG3Q8WXD2 468 aaKnown RBP11.83□□□□□ -0.52
KNOP1-201ENST00000219837 KIF12Q96FN5 646 aa11.83□□□□□ -0.52
KNOP1-201ENST00000219837 RBM41Q96IZ5 413 aaKnown RBP11.83□□□□□ -0.52
KNOP1-201ENST00000219837 SRPK1Q96SB4 655 aaKnown RBP11.83□□□□□ -0.52
KNOP1-201ENST00000219837 RNF146Q9NTX7 359 aa11.83□□□□□ -0.52
KNOP1-201ENST00000219837 CPDO75976 1380 aa11.83□□□□□ -0.52
KNOP1-201ENST00000219837 NDUFA10O95299 355 aa11.83□□□□□ -0.52
KNOP1-201ENST00000219837 FGGP02679 453 aa11.83□□□□□ -0.52
KNOP1-201ENST00000219837 NR3C1P04150 777 aa11.83□□□□□ -0.52
KNOP1-201ENST00000219837 VAMP7P51809 220 aa11.83□□□□□ -0.52
KNOP1-201ENST00000219837 ROR1Q01973 937 aa11.83□□□□□ -0.52
KNOP1-201ENST00000219837 GFPT1Q06210 699 aaPredicted RBP11.83□□□□□ -0.52
KNOP1-201ENST00000219837 C6orf118Q5T5N4 469 aa11.83□□□□□ -0.52
KNOP1-201ENST00000219837 RNF135Q8IUD6 432 aa11.83□□□□□ -0.52
KNOP1-201ENST00000219837 SPATA2LQ8IUW3 424 aaPredicted RBP11.83□□□□□ -0.52
KNOP1-201ENST00000219837 SH3TC2Q8TF17 1288 aa11.83□□□□□ -0.52
KNOP1-201ENST00000219837 ULK4Q96C45 1275 aa11.83□□□□□ -0.52
KNOP1-201ENST00000219837 KIAA1586Q9HCI6 787 aa11.83□□□□□ -0.52
KNOP1-201ENST00000219837 CASS4Q9NQ75 786 aa11.83□□□□□ -0.52
KNOP1-201ENST00000219837 CTNND1O60716 968 aaKnown RBP11.83□□□□□ -0.52
KNOP1-201ENST00000219837 E2F6O75461 281 aa11.83□□□□□ -0.52
KNOP1-201ENST00000219837 PTPN12Q05209 780 aaKnown RBP11.83□□□□□ -0.52
KNOP1-201ENST00000219837 POU5F1BQ06416 359 aa11.83□□□□□ -0.52
KNOP1-201ENST00000219837 CC2D1AQ6P1N0 951 aaPredicted RBP11.83□□□□□ -0.52
KNOP1-201ENST00000219837 TDRD7Q8NHU6 1098 aaKnown RBP11.83□□□□□ -0.52
KNOP1-201ENST00000219837 KLHL29Q96CT2 875 aa11.83□□□□□ -0.52
KNOP1-201ENST00000219837 VPS39Q96JC1 886 aa11.83□□□□□ -0.52
KNOP1-201ENST00000219837 UPF3AQ9H1J1 476 aaKnown RBP11.83□□□□□ -0.52
KNOP1-201ENST00000219837 VPS11Q9H270 941 aa11.83□□□□□ -0.52
KNOP1-201ENST00000219837 PLAAQ9Y263 795 aa11.83□□□□□ -0.52
KNOP1-201ENST00000219837 HOXA7P31268 230 aaPredicted RBP11.82□□□□□ -0.52
KNOP1-201ENST00000219837 RABGGTAQ92696 567 aa11.82□□□□□ -0.52
KNOP1-201ENST00000219837 CYTH2Q99418 400 aa11.82□□□□□ -0.52
KNOP1-201ENST00000219837 CYP26B1Q9NR63 512 aa11.82□□□□□ -0.52
KNOP1-201ENST00000219837 KBTBD13C9JR72 458 aa11.82□□□□□ -0.52
KNOP1-201ENST00000219837 MAPK13O15264 365 aa11.82□□□□□ -0.52
KNOP1-201ENST00000219837 RPS6KA4O75676 772 aa11.82□□□□□ -0.52
KNOP1-201ENST00000219837 ZBED6P86452 979 aa11.82□□□□□ -0.52
KNOP1-201ENST00000219837 TMPRSS15P98073 1019 aa11.82□□□□□ -0.52
KNOP1-201ENST00000219837 ADCY2Q08462 1091 aa11.82□□□□□ -0.52
KNOP1-201ENST00000219837 KRT31Q15323 416 aa11.82□□□□□ -0.52
KNOP1-201ENST00000219837 UNC13DQ70J99 1090 aa11.82□□□□□ -0.52
KNOP1-201ENST00000219837 RHOT2Q8IXI1 618 aa11.82□□□□□ -0.52
KNOP1-201ENST00000219837 ZNF513Q8N8E2 541 aaPredicted RBP11.82□□□□□ -0.52
KNOP1-201ENST00000219837 FBXO41Q8TF61 875 aa11.82□□□□□ -0.52
KNOP1-201ENST00000219837 NRBF2Q96F24 287 aa11.82□□□□□ -0.52
KNOP1-201ENST00000219837 ACAP3Q96P50 834 aa11.82□□□□□ -0.52
KNOP1-201ENST00000219837 INTS2Q9H0H0 1204 aaKnown RBP11.82□□□□□ -0.52
KNOP1-201ENST00000219837 SMYD3Q9H7B4 428 aa11.82□□□□□ -0.52
KNOP1-201ENST00000219837 TBC1D22BQ9NU19 505 aa11.82□□□□□ -0.52
KNOP1-201ENST00000219837 CEP72Q9P209 647 aa11.82□□□□□ -0.52
KNOP1-201ENST00000219837 MROH7-TTC4A0A0A0MT08 1334 aa11.82□□□□□ -0.52
KNOP1-201ENST00000219837 PTCH1Q13635 1447 aa11.82□□□□□ -0.52
KNOP1-201ENST00000219837 E9PMD0 336 aa11.82□□□□□ -0.52
KNOP1-201ENST00000219837 TAF11Q15544 211 aa11.82□□□□□ -0.52
KNOP1-201ENST00000219837 SLFNL1Q499Z3 407 aa11.82□□□□□ -0.52
KNOP1-201ENST00000219837 NEK9Q8TD19 979 aa11.82□□□□□ -0.52
KNOP1-201ENST00000219837 MAGEB5Q9BZ81 275 aa11.82□□□□□ -0.52
KNOP1-201ENST00000219837 STRIP2Q9ULQ0 834 aa11.82□□□□□ -0.52
KNOP1-201ENST00000219837 TRIM49BA6NDI0 452 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms