RNA–Protein interactions for RNA: ENST00000635978.1

CHRNA7-208, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 903 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-208ENST00000635978 CLIP1P30622 1438 aa11.73□□□□□ -0.53
CHRNA7-208ENST00000635978 SAMD9LQ8IVG5 1584 aa11.73□□□□□ -0.53
CHRNA7-208ENST00000635978 ARHGAP35Q9NRY4 1499 aa11.73□□□□□ -0.53
CHRNA7-208ENST00000635978 CPS1P31327 1500 aa11.72□□□□□ -0.53
CHRNA7-208ENST00000635978 NEURL4Q96JN8 1562 aa11.71□□□□□ -0.53
CHRNA7-208ENST00000635978 LRRIQ1Q96JM4 1722 aa11.7□□□□□ -0.54
CHRNA7-208ENST00000635978 A2ML1A8K2U0 1454 aa11.7□□□□□ -0.54
CHRNA7-208ENST00000635978 SHANK2Q9UPX8 1470 aa11.7□□□□□ -0.54
CHRNA7-208ENST00000635978 CLTCQ00610 1675 aaKnown RBP11.69□□□□□ -0.54
CHRNA7-208ENST00000635978 TOM1O60784 492 aa11.69□□□□□ -0.54
CHRNA7-208ENST00000635978 PIP4K2BP78356 416 aa11.69□□□□□ -0.54
CHRNA7-208ENST00000635978 DNMT1P26358 1616 aaKnown RBP11.68□□□□□ -0.54
CHRNA7-208ENST00000635978 ATP1B4Q9UN42 357 aaPredicted RBP11.68□□□□□ -0.54
CHRNA7-208ENST00000635978 VWDEQ8N2E2 1590 aa11.67□□□□□ -0.54
CHRNA7-208ENST00000635978 INO80Q9ULG1 1556 aaPredicted RBP11.67□□□□□ -0.54
CHRNA7-208ENST00000635978 SYCP2Q9BX26 1530 aa11.66□□□□□ -0.54
CHRNA7-208ENST00000635978 A2MP01023 1474 aa11.66□□□□□ -0.54
CHRNA7-208ENST00000635978 ATP7AQ04656 1500 aa11.65□□□□□ -0.54
CHRNA7-208ENST00000635978 SPAG9O60271 1321 aaKnown RBP11.65□□□□□ -0.54
CHRNA7-208ENST00000635978 RGS17Q9UGC6 210 aaPredicted RBP11.65□□□□□ -0.54
CHRNA7-208ENST00000635978 CDC42BPAQ5VT25 1732 aa11.65□□□□□ -0.54
CHRNA7-208ENST00000635978 SUPT6HQ7KZ85 1726 aaKnown RBP11.65□□□□□ -0.54
CHRNA7-208ENST00000635978 KIAA1107Q9UPP5 1409 aa11.64□□□□□ -0.55
CHRNA7-208ENST00000635978 GPATCH8Q9UKJ3 1502 aaKnown RBP11.63□□□□□ -0.55
CHRNA7-208ENST00000635978 POLR1AO95602 1720 aaPredicted RBP11.63□□□□□ -0.55
CHRNA7-208ENST00000635978 MED14O60244 1454 aa11.63□□□□□ -0.55
CHRNA7-208ENST00000635978 CCDC18Q5T9S5 1454 aa11.62□□□□□ -0.55
CHRNA7-208ENST00000635978 CASKIN1Q8WXD9 1431 aa11.61□□□□□ -0.55
CHRNA7-208ENST00000635978 LOC105371045A0A1W2PR82 267 aa11.61□□□□□ -0.55
CHRNA7-208ENST00000635978 HNRNPMP52272 730 aaKnown RBP eCLIP11.61□□□□□ -0.55
CHRNA7-208ENST00000635978 GGT6Q6P531 493 aa11.6□□□□□ -0.55
CHRNA7-208ENST00000635978 TNRQ92752 1358 aa11.59□□□□□ -0.55
CHRNA7-208ENST00000635978 DEPDC5O75140 1603 aa11.59□□□□□ -0.55
CHRNA7-208ENST00000635978 LRRC7Q96NW7 1537 aa11.59□□□□□ -0.55
CHRNA7-208ENST00000635978 NPHP4O75161 1426 aaPredicted RBP11.59□□□□□ -0.55
CHRNA7-208ENST00000635978 PZPP20742 1482 aa11.58□□□□□ -0.56
CHRNA7-208ENST00000635978 PLEKHH2Q8IVE3 1493 aa11.58□□□□□ -0.56
CHRNA7-208ENST00000635978 FBXO31Q5XUX0 539 aaPredicted RBP11.58□□□□□ -0.56
CHRNA7-208ENST00000635978 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.57□□□□□ -0.56
CHRNA7-208ENST00000635978 POLA2Q14181 598 aa11.57□□□□□ -0.56
CHRNA7-208ENST00000635978 ZNF777Q9ULD5 760 aaPredicted RBP11.57□□□□□ -0.56
CHRNA7-208ENST00000635978 RNF17Q9BXT8 1623 aaKnown RBP11.57□□□□□ -0.56
CHRNA7-208ENST00000635978 STRCP1A6NGW2 1772 aa11.56□□□□□ -0.56
CHRNA7-208ENST00000635978 FAM135AQ9P2D6 1515 aa11.56□□□□□ -0.56
CHRNA7-208ENST00000635978 POTEHQ6S545 545 aa11.56□□□□□ -0.56
CHRNA7-208ENST00000635978 ANKLE2Q86XL3 938 aa11.56□□□□□ -0.56
CHRNA7-208ENST00000635978 RBM42Q9BTD8 480 aaKnown RBP11.56□□□□□ -0.56
CHRNA7-208ENST00000635978 ADGBQ8N7X0 1667 aa11.55□□□□□ -0.56
CHRNA7-208ENST00000635978 SYNMO15061 1565 aa11.55□□□□□ -0.56
CHRNA7-208ENST00000635978 UBTFP17480 764 aaKnown RBP11.55□□□□□ -0.56
CHRNA7-208ENST00000635978 NLRP1Q9C000 1473 aa11.55□□□□□ -0.56
CHRNA7-208ENST00000635978 MBD5Q9P267 1494 aa11.55□□□□□ -0.56
CHRNA7-208ENST00000635978 DHX29Q7Z478 1369 aaKnown RBP11.54□□□□□ -0.56
CHRNA7-208ENST00000635978 MIA2Q96PC5 1412 aa11.54□□□□□ -0.56
CHRNA7-208ENST00000635978 KDM5DQ9BY66 1539 aa11.54□□□□□ -0.56
CHRNA7-208ENST00000635978 UGGT1Q9NYU2 1555 aa11.54□□□□□ -0.56
CHRNA7-208ENST00000635978 RTEL1-TNFRSF6BF6WH68 1400 aa11.53□□□□□ -0.56
CHRNA7-208ENST00000635978 IQGAP1P46940 1657 aa11.53□□□□□ -0.56
CHRNA7-208ENST00000635978 FYCO1Q9BQS8 1478 aa11.53□□□□□ -0.56
CHRNA7-208ENST00000635978 POTEAQ6S8J7 498 aa11.53□□□□□ -0.56
CHRNA7-208ENST00000635978 THEMISQ8N1K5 641 aaPredicted RBP11.52□□□□□ -0.57
CHRNA7-208ENST00000635978 CFDP1Q9UEE9 299 aaPredicted RBP11.52□□□□□ -0.57
CHRNA7-208ENST00000635978 ZNF644Q9H582 1327 aaPredicted RBP11.5□□□□□ -0.57
CHRNA7-208ENST00000635978 ZC3H13Q5T200 1668 aaKnown RBP11.49□□□□□ -0.57
CHRNA7-208ENST00000635978 CCNB3Q8WWL7 1395 aa11.49□□□□□ -0.57
CHRNA7-208ENST00000635978 FAM135BQ49AJ0 1406 aa11.48□□□□□ -0.57
CHRNA7-208ENST00000635978 KIF3BO15066 747 aa11.47□□□□□ -0.57
CHRNA7-208ENST00000635978 TIAM1Q13009 1591 aa11.46□□□□□ -0.57
CHRNA7-208ENST00000635978 WASHC2CQ9Y4E1 1318 aa11.46□□□□□ -0.57
CHRNA7-208ENST00000635978 SRCAPQ6ZRS2 3230 aa11.45□□□□□ -0.58
CHRNA7-208ENST00000635978 NCOA2Q15596 1464 aa11.44□□□□□ -0.58
CHRNA7-208ENST00000635978 XIRP1Q702N8 1843 aaKnown RBP11.44□□□□□ -0.58
CHRNA7-208ENST00000635978 ERVK-7P63135 1459 aa11.44□□□□□ -0.58
CHRNA7-208ENST00000635978 SCAF11Q99590 1463 aaKnown RBP11.44□□□□□ -0.58
CHRNA7-208ENST00000635978 ARHGAP23Q9P227 1491 aa11.44□□□□□ -0.58
CHRNA7-208ENST00000635978 CEP162Q5TB80 1403 aa11.43□□□□□ -0.58
CHRNA7-208ENST00000635978 SETD1AO15047 1707 aaKnown RBP11.43□□□□□ -0.58
CHRNA7-208ENST00000635978 ABCC3O15438 1527 aa11.43□□□□□ -0.58
CHRNA7-208ENST00000635978 SLIT1O75093 1534 aa11.42□□□□□ -0.58
CHRNA7-208ENST00000635978 ZBTB12Q9Y330 459 aaPredicted RBP11.42□□□□□ -0.58
CHRNA7-208ENST00000635978 CCDC141Q6ZP82 1450 aa11.42□□□□□ -0.58
CHRNA7-208ENST00000635978 LTKP29376 864 aa11.41□□□□□ -0.58
CHRNA7-208ENST00000635978 ATF5Q9Y2D1 282 aaPredicted RBP11.41□□□□□ -0.58
CHRNA7-208ENST00000635978 UBR1Q8IWV7 1749 aa11.4□□□□□ -0.58
CHRNA7-208ENST00000635978 MAP3K1Q13233 1512 aa11.4□□□□□ -0.58
CHRNA7-208ENST00000635978 MTUS2Q5JR59 1369 aa11.4□□□□□ -0.59
CHRNA7-208ENST00000635978 MROH1Q8NDA8 1641 aa11.39□□□□□ -0.59
CHRNA7-208ENST00000635978 CAMSAP2Q08AD1 1489 aa11.38□□□□□ -0.59
CHRNA7-208ENST00000635978 ATXN8OSP0DMR3 200 aa11.38□□□□□ -0.59
CHRNA7-208ENST00000635978 UPF1Q92900 1129 aaKnown RBP eCLIP11.38□□□□□ -0.59
CHRNA7-208ENST00000635978 ROBO1Q9Y6N7 1651 aa11.38□□□□□ -0.59
CHRNA7-208ENST00000635978 EHBP1L1Q8N3D4 1523 aa11.38□□□□□ -0.59
CHRNA7-208ENST00000635978 TMEM94Q12767 1356 aa11.38□□□□□ -0.59
CHRNA7-208ENST00000635978 RSPH4AQ5TD94 716 aa11.36□□□□□ -0.59
CHRNA7-208ENST00000635978 LRRC9Q6ZRR7 1453 aa11.36□□□□□ -0.59
CHRNA7-208ENST00000635978 ARHGEF5Q12774 1597 aa11.36□□□□□ -0.59
CHRNA7-208ENST00000635978 TXNDC2Q86VQ3 553 aa11.35□□□□□ -0.59
CHRNA7-208ENST00000635978 JCADQ9P266 1359 aa11.34□□□□□ -0.59
CHRNA7-208ENST00000635978 LRP6O75581 1613 aa11.34□□□□□ -0.59
CHRNA7-208ENST00000635978 TMEM2Q9UHN6 1383 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms