RNA–Protein interactions for RNA: ENST00000635273.1

SMARCA2-238, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-238	ENST00000635273	OSBP	P22059	807 aa		13.06	□□□□□ -0.32
SMARCA2-238	ENST00000635273	DAXX	Q9UER7	740 aa	Predicted RBP	13.06	□□□□□ -0.32
SMARCA2-238	ENST00000635273	IL27	Q8NEV9	243 aa		13.04	□□□□□ -0.32
SMARCA2-238	ENST00000635273	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.03	□□□□□ -0.32
SMARCA2-238	ENST00000635273	TBC1D12	O60347	775 aa		13	□□□□□ -0.33
SMARCA2-238	ENST00000635273	LSM11	P83369	360 aa	Known RBP eCLIP	13	□□□□□ -0.33
SMARCA2-238	ENST00000635273	MAP2K5	Q13163	448 aa		13	□□□□□ -0.33
SMARCA2-238	ENST00000635273	DDX12P	Q92771	950 aa		13	□□□□□ -0.33
SMARCA2-238	ENST00000635273	HCST	Q9UBK5	93 aa		12.99	□□□□□ -0.33
SMARCA2-238	ENST00000635273	IRF6	O14896	467 aa		12.98	□□□□□ -0.33
SMARCA2-238	ENST00000635273	GPR153	Q6NV75	609 aa		12.98	□□□□□ -0.33
SMARCA2-238	ENST00000635273	GNPAT	O15228	680 aa		12.97	□□□□□ -0.33
SMARCA2-238	ENST00000635273	CCDC102A	Q96A19	550 aa		12.97	□□□□□ -0.33
SMARCA2-238	ENST00000635273	EVI5	O60447	810 aa		12.96	□□□□□ -0.33
SMARCA2-238	ENST00000635273	FCHSD2	O94868	740 aa		12.95	□□□□□ -0.34
SMARCA2-238	ENST00000635273	HIC1	Q14526	733 aa		12.95	□□□□□ -0.34
SMARCA2-238	ENST00000635273	PRIM1	P49642	420 aa	Known RBP	12.94	□□□□□ -0.34
SMARCA2-238	ENST00000635273	FECH	P22830	423 aa		12.93	□□□□□ -0.34
SMARCA2-238	ENST00000635273	PTCD2	Q8WV60	388 aa	Known RBP	12.93	□□□□□ -0.34
SMARCA2-238	ENST00000635273	AMHR2	Q16671	573 aa		12.92	□□□□□ -0.34
SMARCA2-238	ENST00000635273	FAM117A	Q9C073	453 aa		12.92	□□□□□ -0.34
SMARCA2-238	ENST00000635273	ARX	Q96QS3	562 aa		12.91	□□□□□ -0.34
SMARCA2-238	ENST00000635273	ZNF316	A6NFI3	1004 aa	Predicted RBP	12.9	□□□□□ -0.34
SMARCA2-238	ENST00000635273	PBX2	P40425	430 aa		12.9	□□□□□ -0.34
SMARCA2-238	ENST00000635273	PTGDR	Q13258	359 aa		12.89	□□□□□ -0.35
SMARCA2-238	ENST00000635273	ANO8	Q9HCE9	1232 aa	Predicted RBP	12.88	□□□□□ -0.35
SMARCA2-238	ENST00000635273	SLC34A2	O95436	690 aa		12.87	□□□□□ -0.35
SMARCA2-238	ENST00000635273	PARP9	Q8IXQ6	854 aa		12.87	□□□□□ -0.35
SMARCA2-238	ENST00000635273	ARSI	Q5FYB1	569 aa		12.85	□□□□□ -0.35
SMARCA2-238	ENST00000635273	PLEKHG3	A1L390	1219 aa		12.84	□□□□□ -0.35
SMARCA2-238	ENST00000635273	DDRGK1	Q96HY6	314 aa		12.84	□□□□□ -0.35
SMARCA2-238	ENST00000635273	SUPT5H	O00267	1087 aa	Known RBP	12.83	□□□□□ -0.36
SMARCA2-238	ENST00000635273	PHF14	O94880	888 aa		12.8	□□□□□ -0.36
SMARCA2-238	ENST00000635273	EN1	Q05925	392 aa	Predicted RBP	12.8	□□□□□ -0.36
SMARCA2-238	ENST00000635273	TTLL12	Q14166	644 aa	Predicted RBP	12.79	□□□□□ -0.36
SMARCA2-238	ENST00000635273	EPAS1	Q99814	870 aa		12.79	□□□□□ -0.36
SMARCA2-238	ENST00000635273	NPDC1	Q9NQX5	325 aa	Predicted RBP	12.79	□□□□□ -0.36
SMARCA2-238	ENST00000635273	CDHR5	Q9HBB8	845 aa		12.78	□□□□□ -0.36
SMARCA2-238	ENST00000635273	RGS20	O76081	388 aa		12.76	□□□□□ -0.37
SMARCA2-238	ENST00000635273	MAP3K7	O43318	606 aa		12.75	□□□□□ -0.37
SMARCA2-238	ENST00000635273	PCDHGA10	Q9Y5H3	936 aa		12.75	□□□□□ -0.37
SMARCA2-238	ENST00000635273	GIGYF2	Q6Y7W6	1299 aa	Known RBP	12.74	□□□□□ -0.37
SMARCA2-238	ENST00000635273	RBM33	Q96EV2	1170 aa	Known RBP	12.74	□□□□□ -0.37
SMARCA2-238	ENST00000635273	IRX2	Q9BZI1	471 aa	Predicted RBP	12.74	□□□□□ -0.37
SMARCA2-238	ENST00000635273	ZMYND15	Q9H091	742 aa		12.74	□□□□□ -0.37
SMARCA2-238	ENST00000635273	PCDHGA4	Q9Y5G9	962 aa		12.74	□□□□□ -0.37
SMARCA2-238	ENST00000635273	REPIN1	Q9BWE0	567 aa	Known RBP	12.72	□□□□□ -0.37
SMARCA2-238	ENST00000635273	MS4A1	P11836	297 aa		12.71	□□□□□ -0.37
SMARCA2-238	ENST00000635273	TSR1	Q2NL82	804 aa	Known RBP	12.71	□□□□□ -0.37
SMARCA2-238	ENST00000635273	TYW1B	Q6NUM6	668 aa		12.71	□□□□□ -0.37
SMARCA2-238	ENST00000635273	HOMEZ	Q8IX15	550 aa		12.71	□□□□□ -0.37
SMARCA2-238	ENST00000635273	GOPC	Q9HD26	462 aa		12.71	□□□□□ -0.37
SMARCA2-238	ENST00000635273	KHSRP	Q92945	711 aa	Known RBP eCLIP	12.7	□□□□□ -0.38
SMARCA2-238	ENST00000635273	KDM4F	A0A1W2PPD8	638 aa		12.69	□□□□□ -0.38
SMARCA2-238	ENST00000635273	TMUB1	Q9BVT8	246 aa		12.68	□□□□□ -0.38
SMARCA2-238	ENST00000635273	FBXW7	Q969H0	707 aa		12.67	□□□□□ -0.38
SMARCA2-238	ENST00000635273	JPH4	Q96JJ6	628 aa		12.67	□□□□□ -0.38
SMARCA2-238	ENST00000635273	CLCN1	P35523	988 aa		12.66	□□□□□ -0.38
SMARCA2-238	ENST00000635273	ADGRD1	Q6QNK2	874 aa		12.66	□□□□□ -0.38
SMARCA2-238	ENST00000635273	PHOX2B	Q99453	314 aa		12.66	□□□□□ -0.38
SMARCA2-238	ENST00000635273	AXIN2	Q9Y2T1	843 aa		12.65	□□□□□ -0.38
SMARCA2-238	ENST00000635273	MDM2	Q00987	491 aa	Predicted RBP	12.64	□□□□□ -0.39
SMARCA2-238	ENST00000635273	RSPH6A	Q9H0K4	717 aa		12.64	□□□□□ -0.39
SMARCA2-238	ENST00000635273	GPCPD1	Q9NPB8	672 aa		12.64	□□□□□ -0.39
SMARCA2-238	ENST00000635273	FOSB	P53539	338 aa		12.62	□□□□□ -0.39
SMARCA2-238	ENST00000635273	NUDT7	P0C024	238 aa		12.61	□□□□□ -0.39
SMARCA2-238	ENST00000635273	PCMTD1	Q96MG8	357 aa	Predicted RBP	12.61	□□□□□ -0.39
SMARCA2-238	ENST00000635273	FLII	Q13045	1269 aa		12.6	□□□□□ -0.39
SMARCA2-238	ENST00000635273	FAM161A	Q3B820	660 aa		12.6	□□□□□ -0.39
SMARCA2-238	ENST00000635273	C6orf132	Q5T0Z8	1188 aa		12.6	□□□□□ -0.39
SMARCA2-238	ENST00000635273	CERK	Q8TCT0	537 aa		12.6	□□□□□ -0.39
SMARCA2-238	ENST00000635273	SSTR3	P32745	418 aa	Predicted RBP	12.59	□□□□□ -0.39
SMARCA2-238	ENST00000635273	POTEE	Q6S8J3	1075 aa		12.59	□□□□□ -0.39
SMARCA2-238	ENST00000635273	ARHGAP33	O14559	1287 aa		12.58	□□□□□ -0.4
SMARCA2-238	ENST00000635273	OAT	P04181	439 aa		12.58	□□□□□ -0.4
SMARCA2-238	ENST00000635273	SH3D19	Q5HYK7	790 aa		12.58	□□□□□ -0.4
SMARCA2-238	ENST00000635273	METTL3	Q86U44	580 aa	Known RBP	12.58	□□□□□ -0.4
SMARCA2-238	ENST00000635273	ZDHHC16	Q969W1	377 aa		12.58	□□□□□ -0.4
SMARCA2-238	ENST00000635273	LHX6	Q9UPM6	363 aa		12.58	□□□□□ -0.4
SMARCA2-238	ENST00000635273	TK2	O00142	265 aa		12.57	□□□□□ -0.4
SMARCA2-238	ENST00000635273	PADI6	Q6TGC4	694 aa		12.57	□□□□□ -0.4
SMARCA2-238	ENST00000635273	ZNF454	Q8N9F8	522 aa		12.57	□□□□□ -0.4
SMARCA2-238	ENST00000635273	STAC3	Q96MF2	364 aa		12.57	□□□□□ -0.4
SMARCA2-238	ENST00000635273	PSD	A5PKW4	1024 aa	Predicted RBP	12.56	□□□□□ -0.4
SMARCA2-238	ENST00000635273	ONECUT3	O60422	494 aa	Predicted RBP	12.56	□□□□□ -0.4
SMARCA2-238	ENST00000635273	ADGRG1	Q9Y653	693 aa		12.56	□□□□□ -0.4
SMARCA2-238	ENST00000635273	TTC13	Q8NBP0	860 aa		12.55	□□□□□ -0.4
SMARCA2-238	ENST00000635273	KCTD12	Q96CX2	325 aa	Known RBP	12.55	□□□□□ -0.4
SMARCA2-238	ENST00000635273	FAM217B	Q9NTX9	383 aa	Predicted RBP	12.55	□□□□□ -0.4
SMARCA2-238	ENST00000635273	PXYLP1	Q8TE99	480 aa		12.54	□□□□□ -0.4
SMARCA2-238	ENST00000635273	NLRP7	Q8WX94	980 aa		12.54	□□□□□ -0.4
SMARCA2-238	ENST00000635273	SKIV2L	Q15477	1246 aa	Known RBP	12.53	□□□□□ -0.4
SMARCA2-238	ENST00000635273	IFFO2	Q5TF58	517 aa		12.53	□□□□□ -0.4
SMARCA2-238	ENST00000635273	BEGAIN	Q9BUH8	593 aa		12.53	□□□□□ -0.4
SMARCA2-238	ENST00000635273	RBM27	Q9P2N5	1060 aa	Known RBP	12.53	□□□□□ -0.4
SMARCA2-238	ENST00000635273	ADAM33	Q9BZ11	813 aa		12.52	□□□□□ -0.41
SMARCA2-238	ENST00000635273	PRSS12	P56730	875 aa		12.49	□□□□□ -0.41
SMARCA2-238	ENST00000635273	HR	O43593	1189 aa		12.48	□□□□□ -0.41
SMARCA2-238	ENST00000635273	CDCA7L	Q96GN5	454 aa		12.47	□□□□□ -0.41
SMARCA2-238	ENST00000635273	PROCA1	Q8NCQ7	364 aa	Predicted RBP	12.46	□□□□□ -0.41

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