RNA–Protein interactions for RNA: ENST00000634925.1

SMARCA2-230, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 1,582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-230ENST00000634925 RNF17Q9BXT8 1623 aaKnown RBP16.54■□□□□ 0.24
SMARCA2-230ENST00000634925 MROH1Q8NDA8 1641 aa16.53■□□□□ 0.24
SMARCA2-230ENST00000634925 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.53■□□□□ 0.244e-7■■■■□ 23.1
SMARCA2-230ENST00000634925 NUP155O75694 1391 aa16.52■□□□□ 0.24
SMARCA2-230ENST00000634925 DHX57Q6P158 1386 aaKnown RBP16.52■□□□□ 0.24
SMARCA2-230ENST00000634925 AGLP35573 1532 aa16.51■□□□□ 0.23
SMARCA2-230ENST00000634925 KDM5DQ9BY66 1539 aa16.51■□□□□ 0.23
SMARCA2-230ENST00000634925 PZPP20742 1482 aa16.51■□□□□ 0.23
SMARCA2-230ENST00000634925 IQGAP3Q86VI3 1631 aa16.5■□□□□ 0.23
SMARCA2-230ENST00000634925 PRDM15P57071 1507 aaPredicted RBP16.5■□□□□ 0.23
SMARCA2-230ENST00000634925 ACIN1Q9UKV3 1341 aaKnown RBP16.5■□□□□ 0.23
SMARCA2-230ENST00000634925 GGT6Q6P531 493 aa16.49■□□□□ 0.23
SMARCA2-230ENST00000634925 FAM135AQ9P2D6 1515 aa16.49■□□□□ 0.23
SMARCA2-230ENST00000634925 MPHOSPH9Q99550 1183 aa16.48■□□□□ 0.23
SMARCA2-230ENST00000634925 VWDEQ8N2E2 1590 aa16.48■□□□□ 0.23
SMARCA2-230ENST00000634925 CEP152O94986 1710 aa16.48■□□□□ 0.23
SMARCA2-230ENST00000634925 SLC4A1APQ9BWU0 796 aaKnown RBP16.47■□□□□ 0.23
SMARCA2-230ENST00000634925 CCER1Q8TC90 406 aaPredicted RBP16.46■□□□□ 0.23
SMARCA2-230ENST00000634925 ARID4BQ4LE39 1312 aaPredicted RBP16.45■□□□□ 0.22
SMARCA2-230ENST00000634925 MLECQ14165 292 aa16.45■□□□□ 0.22
SMARCA2-230ENST00000634925 KANK1Q14678 1352 aa16.45■□□□□ 0.22
SMARCA2-230ENST00000634925 CFAP65Q6ZU64 1925 aaKnown RBP16.43■□□□□ 0.22
SMARCA2-230ENST00000634925 TET3O43151 1660 aa16.43■□□□□ 0.22
SMARCA2-230ENST00000634925 FOXD1Q16676 465 aa16.43■□□□□ 0.22
SMARCA2-230ENST00000634925 ABCC3O15438 1527 aa16.42■□□□□ 0.22
SMARCA2-230ENST00000634925 PKD2Q13563 968 aa16.42■□□□□ 0.22
SMARCA2-230ENST00000634925 E9PCH4 1651 aa16.41■□□□□ 0.22
SMARCA2-230ENST00000634925 WASHC2CQ9Y4E1 1318 aa16.41■□□□□ 0.22
SMARCA2-230ENST00000634925 ZC3H13Q5T200 1668 aaKnown RBP16.4■□□□□ 0.22
SMARCA2-230ENST00000634925 LMTK2Q8IWU2 1503 aa16.4■□□□□ 0.22
SMARCA2-230ENST00000634925 CLTCQ00610 1675 aaKnown RBP16.4■□□□□ 0.22
SMARCA2-230ENST00000634925 CAMSAP1Q5T5Y3 1602 aa16.39■□□□□ 0.21
SMARCA2-230ENST00000634925 EFCAB6Q5THR3 1501 aa16.38■□□□□ 0.21
SMARCA2-230ENST00000634925 PPP6R1Q9UPN7 881 aa16.38■□□□□ 0.21
SMARCA2-230ENST00000634925 FER1L4A9Z1Z3 1794 aa16.36■□□□□ 0.21
SMARCA2-230ENST00000634925 ANKRD30BQ9BXX2 1392 aa16.35■□□□□ 0.21
SMARCA2-230ENST00000634925 CLSPNQ9HAW4 1339 aa16.34■□□□□ 0.21
SMARCA2-230ENST00000634925 NPATQ14207 1427 aa16.33■□□□□ 0.21
SMARCA2-230ENST00000634925 SPHKAPQ2M3C7 1700 aa16.33■□□□□ 0.2
SMARCA2-230ENST00000634925 SIN3AQ96ST3 1273 aa16.32■□□□□ 0.2
SMARCA2-230ENST00000634925 PLA2R1Q13018 1463 aa16.32■□□□□ 0.2
SMARCA2-230ENST00000634925 ADAMTSL3P82987 1691 aa16.32■□□□□ 0.2
SMARCA2-230ENST00000634925 ESF1Q9H501 851 aaKnown RBP16.31■□□□□ 0.2
SMARCA2-230ENST00000634925 MADDQ8WXG6 1647 aa16.31■□□□□ 0.2
SMARCA2-230ENST00000634925 MROH2AA6NES4 1674 aa16.3■□□□□ 0.2
SMARCA2-230ENST00000634925 RPRD2Q5VT52 1461 aaKnown RBP16.3■□□□□ 0.2
SMARCA2-230ENST00000634925 ARHGAP31Q2M1Z3 1444 aa16.3■□□□□ 0.2
SMARCA2-230ENST00000634925 PREX1Q8TCU6 1659 aa16.29■□□□□ 0.2
SMARCA2-230ENST00000634925 CNTLNQ9NXG0 1405 aa16.29■□□□□ 0.2
SMARCA2-230ENST00000634925 ZMYM3Q14202 1370 aa16.29■□□□□ 0.2
SMARCA2-230ENST00000634925 RIMS1Q86UR5 1692 aaKnown RBP16.29■□□□□ 0.2
SMARCA2-230ENST00000634925 PTPRTO14522 1441 aa16.28■□□□□ 0.2
SMARCA2-230ENST00000634925 C3P01024 1663 aa16.27■□□□□ 0.2
SMARCA2-230ENST00000634925 NEUROD1Q13562 356 aa16.27■□□□□ 0.2
SMARCA2-230ENST00000634925 TRPM2O94759 1503 aa16.26■□□□□ 0.19
SMARCA2-230ENST00000634925 FBXO31Q5XUX0 539 aaPredicted RBP16.26■□□□□ 0.19
SMARCA2-230ENST00000634925 NOS1P29475 1434 aa16.25■□□□□ 0.19
SMARCA2-230ENST00000634925 CLTCL1P53675 1640 aa16.25■□□□□ 0.19
SMARCA2-230ENST00000634925 SYNMO15061 1565 aa16.25■□□□□ 0.19
SMARCA2-230ENST00000634925 UGGT1Q9NYU2 1555 aa16.25■□□□□ 0.19
SMARCA2-230ENST00000634925 ERVK-7P63135 1459 aa16.24■□□□□ 0.19
SMARCA2-230ENST00000634925 CEBPAP49715 358 aaPredicted RBP16.24■□□□□ 0.19
SMARCA2-230ENST00000634925 CCDC144AA2RUR9 1427 aa16.23■□□□□ 0.19
SMARCA2-230ENST00000634925 SPATA31D1Q6ZQQ2 1576 aa16.23■□□□□ 0.19
SMARCA2-230ENST00000634925 PIK3C2BO00750 1634 aa16.21■□□□□ 0.19
SMARCA2-230ENST00000634925 KIF1BO60333 1816 aa16.21■□□□□ 0.19
SMARCA2-230ENST00000634925 PLPPR3Q6T4P5 718 aa16.21■□□□□ 0.18
SMARCA2-230ENST00000634925 MYO5BQ9ULV0 1848 aa16.18■□□□□ 0.18
SMARCA2-230ENST00000634925 IDI1Q13907 227 aa16.17■□□□□ 0.18
SMARCA2-230ENST00000634925 PTPRMP28827 1452 aa16.16■□□□□ 0.18
SMARCA2-230ENST00000634925 TNRQ92752 1358 aa16.15■□□□□ 0.18
SMARCA2-230ENST00000634925 SETD1BQ9UPS6 1966 aaKnown RBP16.15■□□□□ 0.18
SMARCA2-230ENST00000634925 KDM4FA0A1W2PPD8 638 aa16.15■□□□□ 0.18
SMARCA2-230ENST00000634925 ZEB1P37275 1124 aaPredicted RBP16.15■□□□□ 0.18
SMARCA2-230ENST00000634925 SLC52A1Q9NWF4 448 aa16.15■□□□□ 0.18
SMARCA2-230ENST00000634925 TONSLQ96HA7 1378 aa16.15■□□□□ 0.18
SMARCA2-230ENST00000634925 SPATA31E1Q6ZUB1 1445 aa16.14■□□□□ 0.18
SMARCA2-230ENST00000634925 RGL3Q3MIN7 710 aa16.13■□□□□ 0.17
SMARCA2-230ENST00000634925 L3MBTL2Q969R5 705 aa16.13■□□□□ 0.17
SMARCA2-230ENST00000634925 ADGRB3O60242 1522 aa16.12■□□□□ 0.17
SMARCA2-230ENST00000634925 TMEM131LA2VDJ0 1609 aa16.12■□□□□ 0.17
SMARCA2-230ENST00000634925 CHGAP10645 457 aaKnown RBP16.12■□□□□ 0.17
SMARCA2-230ENST00000634925 TIMELESSQ9UNS1 1208 aa16.12■□□□□ 0.17
SMARCA2-230ENST00000634925 NEURL4Q96JN8 1562 aa16.11■□□□□ 0.17
SMARCA2-230ENST00000634925 MYO3AQ8NEV4 1616 aa16.1■□□□□ 0.17
SMARCA2-230ENST00000634925 UBR1Q8IWV7 1749 aa16.08■□□□□ 0.17
SMARCA2-230ENST00000634925 IFT172Q9UG01 1749 aa16.08■□□□□ 0.16
SMARCA2-230ENST00000634925 NLRP1Q9C000 1473 aa16.07■□□□□ 0.16
SMARCA2-230ENST00000634925 PPP1R15AO75807 674 aaPredicted RBP16.07■□□□□ 0.16
SMARCA2-230ENST00000634925 DCAF11Q8TEB1 546 aa16.07■□□□□ 0.16
SMARCA2-230ENST00000634925 PPLO60437 1756 aa16.07■□□□□ 0.16
SMARCA2-230ENST00000634925 KDM5AP29375 1690 aaKnown RBP16.06■□□□□ 0.16
SMARCA2-230ENST00000634925 ZNF326Q5BKZ1 582 aaKnown RBP16.06■□□□□ 0.16
SMARCA2-230ENST00000634925 KDM2AQ9Y2K7 1162 aa16.06■□□□□ 0.16
SMARCA2-230ENST00000634925 A2ML1A8K2U0 1454 aa16.06■□□□□ 0.16
SMARCA2-230ENST00000634925 STAG3Q9UJ98 1225 aa16.05■□□□□ 0.16
SMARCA2-230ENST00000634925 CEP170BQ9Y4F5 1589 aaPredicted RBP16.04■□□□□ 0.16
SMARCA2-230ENST00000634925 NEXMIFQ5QGS0 1516 aa16.03■□□□□ 0.16
SMARCA2-230ENST00000634925 ZNF142P52746 1687 aaPredicted RBP16.03■□□□□ 0.16
SMARCA2-230ENST00000634925 NBPF8Q3BBV2 869 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms