RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 ESF1Q9H501 851 aaKnown RBP22.52■■□□□ 1.2
CDC42BPB-209ENST00000634889 RRP7BPQ9NSQ0 103 aa22.52■■□□□ 1.2
CDC42BPB-209ENST00000634889 ROCK1Q13464 1354 aa22.51■■□□□ 1.19
CDC42BPB-209ENST00000634889 GGT6Q6P531 493 aa22.5■■□□□ 1.19
CDC42BPB-209ENST00000634889 CLTCQ00610 1675 aaKnown RBP22.49■■□□□ 1.19
CDC42BPB-209ENST00000634889 KDM5DQ9BY66 1539 aa22.47■■□□□ 1.19
CDC42BPB-209ENST00000634889 C3P01024 1663 aa22.47■■□□□ 1.19
CDC42BPB-209ENST00000634889 DEPDC5O75140 1603 aa22.46■■□□□ 1.19
CDC42BPB-209ENST00000634889 MROH1Q8NDA8 1641 aa22.46■■□□□ 1.19
CDC42BPB-209ENST00000634889 ZC3H13Q5T200 1668 aaKnown RBP22.46■■□□□ 1.19
CDC42BPB-209ENST00000634889 PRDM15P57071 1507 aaPredicted RBP22.44■■□□□ 1.18
CDC42BPB-209ENST00000634889 ANKRD50Q9ULJ7 1429 aa22.43■■□□□ 1.18
CDC42BPB-209ENST00000634889 ITGAEP38570 1179 aa22.43■■□□□ 1.18
CDC42BPB-209ENST00000634889 ZMYM3Q14202 1370 aa22.41■■□□□ 1.18
CDC42BPB-209ENST00000634889 WASHC2CQ9Y4E1 1318 aa22.39■■□□□ 1.18
CDC42BPB-209ENST00000634889 ABCC3O15438 1527 aa22.38■■□□□ 1.17
CDC42BPB-209ENST00000634889 CEBPAP49715 358 aaPredicted RBP22.38■■□□□ 1.17
CDC42BPB-209ENST00000634889 NPATQ14207 1427 aa22.37■■□□□ 1.17
CDC42BPB-209ENST00000634889 PLPPR3Q6T4P5 718 aa22.36■■□□□ 1.17
CDC42BPB-209ENST00000634889 PREX1Q8TCU6 1659 aa22.36■■□□□ 1.17
CDC42BPB-209ENST00000634889 CEP152O94986 1710 aa22.35■■□□□ 1.17
CDC42BPB-209ENST00000634889 GCC2Q8IWJ2 1684 aa22.35■■□□□ 1.17
CDC42BPB-209ENST00000634889 VWDEQ8N2E2 1590 aa22.34■■□□□ 1.17
CDC42BPB-209ENST00000634889 KANK1Q14678 1352 aa22.34■■□□□ 1.17
CDC42BPB-209ENST00000634889 PZPP20742 1482 aa22.34■■□□□ 1.17
CDC42BPB-209ENST00000634889 UNC13BO14795 1591 aa22.33■■□□□ 1.17
CDC42BPB-209ENST00000634889 SETD1BQ9UPS6 1966 aaKnown RBP22.33■■□□□ 1.17
CDC42BPB-209ENST00000634889 CAMSAP1Q5T5Y3 1602 aa22.33■■□□□ 1.17
CDC42BPB-209ENST00000634889 LMTK3Q96Q04 1460 aa22.32■■□□□ 1.16
CDC42BPB-209ENST00000634889 LMTK2Q8IWU2 1503 aa22.31■■□□□ 1.16
CDC42BPB-209ENST00000634889 HFM1A2PYH4 1435 aa22.31■■□□□ 1.16
CDC42BPB-209ENST00000634889 NAIPQ13075 1403 aa22.3■■□□□ 1.16
CDC42BPB-209ENST00000634889 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.28■■□□□ 1.16
CDC42BPB-209ENST00000634889 ARHGAP31Q2M1Z3 1444 aa22.28■■□□□ 1.16
CDC42BPB-209ENST00000634889 UHRF1BP1Q6BDS2 1440 aa22.28■■□□□ 1.16
CDC42BPB-209ENST00000634889 MYO3AQ8NEV4 1616 aa22.25■■□□□ 1.15
CDC42BPB-209ENST00000634889 IQGAP3Q86VI3 1631 aa22.24■■□□□ 1.15
CDC42BPB-209ENST00000634889 EFCAB6Q5THR3 1501 aa22.24■■□□□ 1.15
CDC42BPB-209ENST00000634889 SPATA31D1Q6ZQQ2 1576 aa22.23■■□□□ 1.15
CDC42BPB-209ENST00000634889 TET3O43151 1660 aa22.23■■□□□ 1.15
CDC42BPB-209ENST00000634889 ZNF142P52746 1687 aaPredicted RBP22.23■■□□□ 1.15
CDC42BPB-209ENST00000634889 TNRQ92752 1358 aa22.21■■□□□ 1.15
CDC42BPB-209ENST00000634889 ERVK-7P63135 1459 aa22.21■■□□□ 1.15
CDC42BPB-209ENST00000634889 FBXO31Q5XUX0 539 aaPredicted RBP22.2■■□□□ 1.14
CDC42BPB-209ENST00000634889 RPRD2Q5VT52 1461 aaKnown RBP22.19■■□□□ 1.14
CDC42BPB-209ENST00000634889 CEP170BQ9Y4F5 1589 aaPredicted RBP22.18■■□□□ 1.14
CDC42BPB-209ENST00000634889 NLRP1Q9C000 1473 aa22.17■■□□□ 1.14
CDC42BPB-209ENST00000634889 NUP155O75694 1391 aa22.17■■□□□ 1.14
CDC42BPB-209ENST00000634889 A2ML1A8K2U0 1454 aa22.15■■□□□ 1.14
CDC42BPB-209ENST00000634889 E9PCH4 1651 aa22.13■■□□□ 1.13
CDC42BPB-209ENST00000634889 CFAP65Q6ZU64 1925 aaKnown RBP22.12■■□□□ 1.13
CDC42BPB-209ENST00000634889 HSPA2P54652 639 aa22.12■■□□□ 1.13
CDC42BPB-209ENST00000634889 NOS1P29475 1434 aa22.11■■□□□ 1.13
CDC42BPB-209ENST00000634889 ACIN1Q9UKV3 1341 aaKnown RBP22.1■■□□□ 1.13
CDC42BPB-209ENST00000634889 SETD5Q9C0A6 1442 aa22.09■■□□□ 1.13
CDC42BPB-209ENST00000634889 SYNMO15061 1565 aa22.08■■□□□ 1.13
CDC42BPB-209ENST00000634889 UGGT1Q9NYU2 1555 aa22.08■■□□□ 1.12
CDC42BPB-209ENST00000634889 PLA2R1Q13018 1463 aa22.07■■□□□ 1.12
CDC42BPB-209ENST00000634889 KDM5AP29375 1690 aaKnown RBP22.05■■□□□ 1.12
CDC42BPB-209ENST00000634889 STRCQ7RTU9 1775 aa22.04■■□□□ 1.12
CDC42BPB-209ENST00000634889 TRIM52Q96A61 297 aa22.04■■□□□ 1.12
CDC42BPB-209ENST00000634889 UBR1Q8IWV7 1749 aa22.03■■□□□ 1.12
CDC42BPB-209ENST00000634889 PIK3C2BO00750 1634 aa22.02■■□□□ 1.12
CDC42BPB-209ENST00000634889 RAB3GAP2Q9H2M9 1393 aa22.01■■□□□ 1.11
CDC42BPB-209ENST00000634889 SPHKAPQ2M3C7 1700 aa22.01■■□□□ 1.11
CDC42BPB-209ENST00000634889 SLC52A1Q9NWF4 448 aa22.01■■□□□ 1.11
CDC42BPB-209ENST00000634889 THEMISQ8N1K5 641 aaPredicted RBP22■■□□□ 1.11
CDC42BPB-209ENST00000634889 PTPRTO14522 1441 aa21.98■■□□□ 1.11
CDC42BPB-209ENST00000634889 POLR1AO95602 1720 aaPredicted RBP21.97■■□□□ 1.11
CDC42BPB-209ENST00000634889 ADGRB3O60242 1522 aa21.97■■□□□ 1.11
CDC42BPB-209ENST00000634889 IDI1Q13907 227 aa21.97■■□□□ 1.11
CDC42BPB-209ENST00000634889 SLC4A1APQ9BWU0 796 aaKnown RBP21.97■■□□□ 1.11
CDC42BPB-209ENST00000634889 DMRT2Q9Y5R5 561 aa21.96■■□□□ 1.11
CDC42BPB-209ENST00000634889 HRCP23327 699 aa21.95■■□□□ 1.1
CDC42BPB-209ENST00000634889 PKD2Q13563 968 aa21.95■■□□□ 1.1
CDC42BPB-209ENST00000634889 TRPM2O94759 1503 aa21.95■■□□□ 1.1
CDC42BPB-209ENST00000634889 SLIT1O75093 1534 aa21.94■■□□□ 1.1
CDC42BPB-209ENST00000634889 ARHGAP23Q9P227 1491 aa21.92■■□□□ 1.1
CDC42BPB-209ENST00000634889 STAG3Q9UJ98 1225 aa21.92■■□□□ 1.1
CDC42BPB-209ENST00000634889 TMEM131LA2VDJ0 1609 aa21.91■■□□□ 1.1
CDC42BPB-209ENST00000634889 MPHOSPH9Q99550 1183 aa21.91■■□□□ 1.1
CDC42BPB-209ENST00000634889 NEURL4Q96JN8 1562 aa21.91■■□□□ 1.1
CDC42BPB-209ENST00000634889 ANKLE2Q86XL3 938 aa21.9■■□□□ 1.1
CDC42BPB-209ENST00000634889 NCKAP5LQ9HCH0 1330 aa21.89■■□□□ 1.1
CDC42BPB-209ENST00000634889 TMEM2Q9UHN6 1383 aa21.88■■□□□ 1.09
CDC42BPB-209ENST00000634889 TRIM26Q12899 539 aaPredicted RBP21.88■■□□□ 1.09
CDC42BPB-209ENST00000634889 MED14O60244 1454 aa21.88■■□□□ 1.09
CDC42BPB-209ENST00000634889 CLTCL1P53675 1640 aa21.88■■□□□ 1.09
CDC42BPB-209ENST00000634889 SCAF11Q99590 1463 aaKnown RBP21.87■■□□□ 1.09
CDC42BPB-209ENST00000634889 MYO5BQ9ULV0 1848 aa21.87■■□□□ 1.09
CDC42BPB-209ENST00000634889 IQGAP1P46940 1657 aa21.85■■□□□ 1.09
CDC42BPB-209ENST00000634889 EID1Q9Y6B2 187 aa21.83■■□□□ 1.09
CDC42BPB-209ENST00000634889 KIF1BO60333 1816 aa21.83■■□□□ 1.08
CDC42BPB-209ENST00000634889 NPHP4O75161 1426 aaPredicted RBP21.82■■□□□ 1.08
CDC42BPB-209ENST00000634889 ZFYVE9O95405 1425 aa21.8■■□□□ 1.08
CDC42BPB-209ENST00000634889 FOXD1Q16676 465 aa21.8■■□□□ 1.08
CDC42BPB-209ENST00000634889 TXNDC2Q86VQ3 553 aa21.8■■□□□ 1.08
CDC42BPB-209ENST00000634889 CHGAP10645 457 aaKnown RBP21.79■■□□□ 1.08
CDC42BPB-209ENST00000634889 LTKP29376 864 aa21.79■■□□□ 1.08
CDC42BPB-209ENST00000634889 CCDC144AA2RUR9 1427 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms