RNA–Protein interactions for RNA: ENST00000629346.2

CHD2-218, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene CHD2, Length 1,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-218ENST00000629346 INO80Q9ULG1 1556 aaPredicted RBP19.67■□□□□ 0.74
CHD2-218ENST00000629346 CFDP1Q9UEE9 299 aaPredicted RBP19.67■□□□□ 0.74
CHD2-218ENST00000629346 GPATCH8Q9UKJ3 1502 aaKnown RBP19.66■□□□□ 0.74
CHD2-218ENST00000629346 THEMISQ8N1K5 641 aaPredicted RBP19.66■□□□□ 0.74
CHD2-218ENST00000629346 NPHP4O75161 1426 aaPredicted RBP19.65■□□□□ 0.74
CHD2-218ENST00000629346 CASKIN1Q8WXD9 1431 aa19.65■□□□□ 0.74
CHD2-218ENST00000629346 KIAA1107Q9UPP5 1409 aa19.63■□□□□ 0.73
CHD2-218ENST00000629346 LRRC7Q96NW7 1537 aa19.61■□□□□ 0.73
CHD2-218ENST00000629346 PLEKHH2Q8IVE3 1493 aa19.6■□□□□ 0.73
CHD2-218ENST00000629346 ADGBQ8N7X0 1667 aa19.6■□□□□ 0.73
CHD2-218ENST00000629346 KIF3BO15066 747 aa19.6■□□□□ 0.73
CHD2-218ENST00000629346 POTEAQ6S8J7 498 aa19.6■□□□□ 0.73
CHD2-218ENST00000629346 ZNF644Q9H582 1327 aaPredicted RBP19.58■□□□□ 0.73
CHD2-218ENST00000629346 MED14O60244 1454 aa19.58■□□□□ 0.72
CHD2-218ENST00000629346 CCNB3Q8WWL7 1395 aa19.57■□□□□ 0.72
CHD2-218ENST00000629346 UGGT1Q9NYU2 1555 aa19.57■□□□□ 0.72
CHD2-218ENST00000629346 WASHC2CQ9Y4E1 1318 aa19.57■□□□□ 0.72
CHD2-218ENST00000629346 PZPP20742 1482 aa19.57■□□□□ 0.72
CHD2-218ENST00000629346 MIA2Q96PC5 1412 aa19.57■□□□□ 0.72
CHD2-218ENST00000629346 STRCP1A6NGW2 1772 aa19.57■□□□□ 0.72
CHD2-218ENST00000629346 FAM135AQ9P2D6 1515 aa19.56■□□□□ 0.72
CHD2-218ENST00000629346 RNF17Q9BXT8 1623 aaKnown RBP19.56■□□□□ 0.72
CHD2-218ENST00000629346 DHX29Q7Z478 1369 aaKnown RBP19.56■□□□□ 0.72
CHD2-218ENST00000629346 DEPDC5O75140 1603 aa19.55■□□□□ 0.72
CHD2-218ENST00000629346 IQGAP1P46940 1657 aa19.55■□□□□ 0.72
CHD2-218ENST00000629346 NLRP1Q9C000 1473 aa19.53■□□□□ 0.72
CHD2-218ENST00000629346 KDM5DQ9BY66 1539 aa19.52■□□□□ 0.72
CHD2-218ENST00000629346 FYCO1Q9BQS8 1478 aa19.5■□□□□ 0.71
CHD2-218ENST00000629346 SYNMO15061 1565 aa19.49■□□□□ 0.71
CHD2-218ENST00000629346 RTEL1-TNFRSF6BF6WH68 1400 aa19.48■□□□□ 0.71
CHD2-218ENST00000629346 MBD5Q9P267 1494 aa19.48■□□□□ 0.71
CHD2-218ENST00000629346 MTUS2Q5JR59 1369 aa19.45■□□□□ 0.7
CHD2-218ENST00000629346 SETD1AO15047 1707 aaKnown RBP19.45■□□□□ 0.7
CHD2-218ENST00000629346 FAM135BQ49AJ0 1406 aa19.41■□□□□ 0.7
CHD2-218ENST00000629346 ZC3H13Q5T200 1668 aaKnown RBP19.4■□□□□ 0.7
CHD2-218ENST00000629346 LTKP29376 864 aa19.39■□□□□ 0.69
CHD2-218ENST00000629346 TXNDC2Q86VQ3 553 aa19.39■□□□□ 0.69
CHD2-218ENST00000629346 TIAM1Q13009 1591 aa19.39■□□□□ 0.69
CHD2-218ENST00000629346 XIRP1Q702N8 1843 aaKnown RBP19.38■□□□□ 0.69
CHD2-218ENST00000629346 SCAF11Q99590 1463 aaKnown RBP19.38■□□□□ 0.69
CHD2-218ENST00000629346 CCDC141Q6ZP82 1450 aa19.35■□□□□ 0.69
CHD2-218ENST00000629346 RBM33Q96EV2 1170 aaKnown RBP19.35■□□□□ 0.69
CHD2-218ENST00000629346 UPF1Q92900 1129 aaKnown RBP eCLIP19.34■□□□□ 0.69
CHD2-218ENST00000629346 ERVK-7P63135 1459 aa19.34■□□□□ 0.69
CHD2-218ENST00000629346 TMEM94Q12767 1356 aa19.33■□□□□ 0.69
CHD2-218ENST00000629346 ROBO1Q9Y6N7 1651 aa19.33■□□□□ 0.68
CHD2-218ENST00000629346 UBR1Q8IWV7 1749 aa19.32■□□□□ 0.68
CHD2-218ENST00000629346 EID1Q9Y6B2 187 aa19.32■□□□□ 0.68
CHD2-218ENST00000629346 ABCC3O15438 1527 aa19.31■□□□□ 0.68
CHD2-218ENST00000629346 NCOA2Q15596 1464 aa19.31■□□□□ 0.68
CHD2-218ENST00000629346 TRIM52Q96A61 297 aa19.31■□□□□ 0.68
CHD2-218ENST00000629346 TSPY4P0CV99 314 aa19.3■□□□□ 0.68
CHD2-218ENST00000629346 TSPY10P0CW01 314 aa19.3■□□□□ 0.68
CHD2-218ENST00000629346 RSPH4AQ5TD94 716 aa19.3■□□□□ 0.68
CHD2-218ENST00000629346 PROSER2Q86WR7 435 aaPredicted RBP19.3■□□□□ 0.68
CHD2-218ENST00000629346 CFAP65Q6ZU64 1925 aaKnown RBP19.29■□□□□ 0.68
CHD2-218ENST00000629346 CAMSAP2Q08AD1 1489 aa19.29■□□□□ 0.68
CHD2-218ENST00000629346 ARHGAP23Q9P227 1491 aa19.27■□□□□ 0.67
CHD2-218ENST00000629346 EHBP1L1Q8N3D4 1523 aa19.26■□□□□ 0.67
CHD2-218ENST00000629346 CEP162Q5TB80 1403 aa19.25■□□□□ 0.67
CHD2-218ENST00000629346 SLIT1O75093 1534 aa19.25■□□□□ 0.67
CHD2-218ENST00000629346 JCADQ9P266 1359 aa19.25■□□□□ 0.67
CHD2-218ENST00000629346 KCNA6P17658 529 aa19.25■□□□□ 0.67
CHD2-218ENST00000629346 MEX3CQ5U5Q3 659 aaKnown RBP19.24■□□□□ 0.67
CHD2-218ENST00000629346 SLC26A8Q96RN1 970 aa19.24■□□□□ 0.67
CHD2-218ENST00000629346 STAG3Q9UJ98 1225 aa19.24■□□□□ 0.67
CHD2-218ENST00000629346 SLAIN2Q9P270 581 aa19.23■□□□□ 0.67
CHD2-218ENST00000629346 PHLPP1O60346 1717 aa19.22■□□□□ 0.67
CHD2-218ENST00000629346 MAP3K1Q13233 1512 aa19.22■□□□□ 0.67
CHD2-218ENST00000629346 CEP152O94986 1710 aa19.21■□□□□ 0.67
CHD2-218ENST00000629346 LRRC9Q6ZRR7 1453 aa19.21■□□□□ 0.67
CHD2-218ENST00000629346 ZNF772Q68DY9 489 aaPredicted RBP19.2■□□□□ 0.66
CHD2-218ENST00000629346 TMEM2Q9UHN6 1383 aa19.19■□□□□ 0.66
CHD2-218ENST00000629346 MSH6P52701 1360 aa19.19■□□□□ 0.66
CHD2-218ENST00000629346 ARHGEF5Q12774 1597 aa19.18■□□□□ 0.66
CHD2-218ENST00000629346 MROH1Q8NDA8 1641 aa19.18■□□□□ 0.66
CHD2-218ENST00000629346 BCANQ96GW7 911 aa19.17■□□□□ 0.66
CHD2-218ENST00000629346 LRP6O75581 1613 aa19.17■□□□□ 0.66
CHD2-218ENST00000629346 PIK3C2BO00750 1634 aa19.16■□□□□ 0.66
CHD2-218ENST00000629346 RXRBP28702 533 aa19.16■□□□□ 0.66
CHD2-218ENST00000629346 PRDM15P57071 1507 aaPredicted RBP19.15■□□□□ 0.66
CHD2-218ENST00000629346 SRCAPQ6ZRS2 3230 aa19.15■□□□□ 0.66
CHD2-218ENST00000629346 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.14■□□□□ 0.65
CHD2-218ENST00000629346 EIF2AK4Q9P2K8 1649 aaKnown RBP19.14■□□□□ 0.65
CHD2-218ENST00000629346 SPATA31A6Q5VVP1 1343 aa19.13■□□□□ 0.65
CHD2-218ENST00000629346 COL16A1Q07092 1604 aaPredicted RBP19.11■□□□□ 0.65
CHD2-218ENST00000629346 IDI1Q13907 227 aa19.11■□□□□ 0.65
CHD2-218ENST00000629346 TET3O43151 1660 aa19.11■□□□□ 0.65
CHD2-218ENST00000629346 NKTRP30414 1462 aaKnown RBP19.1■□□□□ 0.65
CHD2-218ENST00000629346 ARHGAP31Q2M1Z3 1444 aa19.1■□□□□ 0.65
CHD2-218ENST00000629346 NUTM2BA6NNL0 878 aaPredicted RBP19.1■□□□□ 0.65
CHD2-218ENST00000629346 NUTM2EB1AL46 878 aaPredicted RBP19.1■□□□□ 0.65
CHD2-218ENST00000629346 NUTM2AQ8IVF1 878 aaPredicted RBP19.1■□□□□ 0.65
CHD2-218ENST00000629346 EFCAB6Q5THR3 1501 aa19.1■□□□□ 0.65
CHD2-218ENST00000629346 MAST1Q9Y2H9 1570 aa19.09■□□□□ 0.65
CHD2-218ENST00000629346 C14orf37Q86TY3 774 aa19.08■□□□□ 0.64
CHD2-218ENST00000629346 FGD6Q6ZV73 1430 aa19.08■□□□□ 0.64
CHD2-218ENST00000629346 NWD1Q149M9 1564 aa19.06■□□□□ 0.64
CHD2-218ENST00000629346 DUOX2Q9NRD8 1548 aa19.05■□□□□ 0.64
CHD2-218ENST00000629346 RRP7BPQ9NSQ0 103 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms