RNA–Protein interactions for RNA: ENST00000627282.2

CNOT9-209, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 2 BASIC

Gene CNOT9, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-209ENST00000627282 LMTK3Q96Q04 1460 aa28.8■■■□□ 2.2
CNOT9-209ENST00000627282 CEBPAP49715 358 aaPredicted RBP28.8■■■□□ 2.2
CNOT9-209ENST00000627282 DUOX2Q9NRD8 1548 aa28.77■■■□□ 2.2
CNOT9-209ENST00000627282 C3P01024 1663 aa28.76■■■□□ 2.2
CNOT9-209ENST00000627282 GGT6Q6P531 493 aa28.76■■■□□ 2.19
CNOT9-209ENST00000627282 MROH2AA6NES4 1674 aa28.75■■■□□ 2.19
CNOT9-209ENST00000627282 PPP6R1Q9UPN7 881 aa28.72■■■□□ 2.19
CNOT9-209ENST00000627282 KIF3BO15066 747 aa28.71■■■□□ 2.19
CNOT9-209ENST00000627282 ERBINQ96RT1 1412 aa28.7■■■□□ 2.18
CNOT9-209ENST00000627282 CLTCQ00610 1675 aaKnown RBP28.7■■■□□ 2.18
CNOT9-209ENST00000627282 PREX1Q8TCU6 1659 aa28.7■■■□□ 2.18
CNOT9-209ENST00000627282 ZMYM3Q14202 1370 aa28.69■■■□□ 2.18
CNOT9-209ENST00000627282 ANKRD50Q9ULJ7 1429 aa28.67■■■□□ 2.18
CNOT9-209ENST00000627282 NAIPQ13075 1403 aa28.66■■■□□ 2.18
CNOT9-209ENST00000627282 HFM1A2PYH4 1435 aa28.66■■■□□ 2.18
CNOT9-209ENST00000627282 SETD1BQ9UPS6 1966 aaKnown RBP28.65■■■□□ 2.18
CNOT9-209ENST00000627282 EIF2AK4Q9P2K8 1649 aaKnown RBP28.65■■■□□ 2.18
CNOT9-209ENST00000627282 FAM135AQ9P2D6 1515 aa28.64■■■□□ 2.18
CNOT9-209ENST00000627282 NPATQ14207 1427 aa28.64■■■□□ 2.17
CNOT9-209ENST00000627282 UHRF1BP1Q6BDS2 1440 aa28.63■■■□□ 2.17
CNOT9-209ENST00000627282 HSPA2P54652 639 aa28.62■■■□□ 2.17
CNOT9-209ENST00000627282 GCC2Q8IWJ2 1684 aa28.61■■■□□ 2.17
CNOT9-209ENST00000627282 RNF17Q9BXT8 1623 aaKnown RBP28.61■■■□□ 2.17
CNOT9-209ENST00000627282 KDM5DQ9BY66 1539 aa28.61■■■□□ 2.17
CNOT9-209ENST00000627282 MROH1Q8NDA8 1641 aa28.56■■■□□ 2.16
CNOT9-209ENST00000627282 WASHC2CQ9Y4E1 1318 aa28.55■■■□□ 2.16
CNOT9-209ENST00000627282 DEPDC5O75140 1603 aa28.53■■■□□ 2.16
CNOT9-209ENST00000627282 PRDM15P57071 1507 aaPredicted RBP28.51■■■□□ 2.15
CNOT9-209ENST00000627282 ZEB1P37275 1124 aaPredicted RBP28.5■■■□□ 2.15
CNOT9-209ENST00000627282 ABCC3O15438 1527 aa28.5■■■□□ 2.15
CNOT9-209ENST00000627282 SETD5Q9C0A6 1442 aa28.5■■■□□ 2.15
CNOT9-209ENST00000627282 PZPP20742 1482 aa28.49■■■□□ 2.15
CNOT9-209ENST00000627282 ZC3H13Q5T200 1668 aaKnown RBP28.49■■■□□ 2.15
CNOT9-209ENST00000627282 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.48■■■□□ 2.15
CNOT9-209ENST00000627282 UNC13BO14795 1591 aa28.47■■■□□ 2.15
CNOT9-209ENST00000627282 MYO3AQ8NEV4 1616 aa28.46■■■□□ 2.15
CNOT9-209ENST00000627282 VWDEQ8N2E2 1590 aa28.44■■■□□ 2.14
CNOT9-209ENST00000627282 RAB3GAP2Q9H2M9 1393 aa28.43■■■□□ 2.14
CNOT9-209ENST00000627282 ZNF142P52746 1687 aaPredicted RBP28.42■■■□□ 2.14
CNOT9-209ENST00000627282 FBXO31Q5XUX0 539 aaPredicted RBP28.42■■■□□ 2.14
CNOT9-209ENST00000627282 KANK1Q14678 1352 aa28.41■■■□□ 2.14
CNOT9-209ENST00000627282 CEP170BQ9Y4F5 1589 aaPredicted RBP28.4■■■□□ 2.14
CNOT9-209ENST00000627282 TNRQ92752 1358 aa28.4■■■□□ 2.14
CNOT9-209ENST00000627282 CEP152O94986 1710 aa28.39■■■□□ 2.14
CNOT9-209ENST00000627282 NUP155O75694 1391 aa28.39■■■□□ 2.14
CNOT9-209ENST00000627282 STRCQ7RTU9 1775 aa28.38■■■□□ 2.13
CNOT9-209ENST00000627282 CAMSAP1Q5T5Y3 1602 aa28.37■■■□□ 2.13
CNOT9-209ENST00000627282 LMTK2Q8IWU2 1503 aa28.37■■■□□ 2.13
CNOT9-209ENST00000627282 A2ML1A8K2U0 1454 aa28.35■■■□□ 2.13
CNOT9-209ENST00000627282 IQGAP3Q86VI3 1631 aa28.35■■■□□ 2.13
CNOT9-209ENST00000627282 TRIM52Q96A61 297 aa28.33■■■□□ 2.13
CNOT9-209ENST00000627282 SPATA31D1Q6ZQQ2 1576 aa28.32■■■□□ 2.12
CNOT9-209ENST00000627282 ARHGAP31Q2M1Z3 1444 aa28.31■■■□□ 2.12
CNOT9-209ENST00000627282 ERVK-7P63135 1459 aa28.31■■■□□ 2.12
CNOT9-209ENST00000627282 DMRT2Q9Y5R5 561 aa28.31■■■□□ 2.12
CNOT9-209ENST00000627282 NLRP1Q9C000 1473 aa28.3■■■□□ 2.12
CNOT9-209ENST00000627282 PLA2R1Q13018 1463 aa28.28■■■□□ 2.12
CNOT9-209ENST00000627282 EFCAB6Q5THR3 1501 aa28.28■■■□□ 2.12
CNOT9-209ENST00000627282 TET3O43151 1660 aa28.28■■■□□ 2.12
CNOT9-209ENST00000627282 PTPRTO14522 1441 aa28.26■■■□□ 2.11
CNOT9-209ENST00000627282 CCER1Q8TC90 406 aaPredicted RBP28.25■■■□□ 2.11
CNOT9-209ENST00000627282 ACIN1Q9UKV3 1341 aaKnown RBP28.24■■■□□ 2.11
CNOT9-209ENST00000627282 SLC4A1APQ9BWU0 796 aaKnown RBP28.21■■■□□ 2.11
CNOT9-209ENST00000627282 CFAP65Q6ZU64 1925 aaKnown RBP28.2■■■□□ 2.1
CNOT9-209ENST00000627282 E9PCH4 1651 aa28.2■■■□□ 2.1
CNOT9-209ENST00000627282 UGGT1Q9NYU2 1555 aa28.2■■■□□ 2.1
CNOT9-209ENST00000627282 NCKAP5LQ9HCH0 1330 aa28.19■■■□□ 2.1
CNOT9-209ENST00000627282 PKD2Q13563 968 aa28.19■■■□□ 2.1
CNOT9-209ENST00000627282 MPHOSPH9Q99550 1183 aa28.18■■■□□ 2.1
CNOT9-209ENST00000627282 RPRD2Q5VT52 1461 aaKnown RBP28.18■■■□□ 2.1
CNOT9-209ENST00000627282 THEMISQ8N1K5 641 aaPredicted RBP28.16■■■□□ 2.1
CNOT9-209ENST00000627282 NOS1P29475 1434 aa28.13■■■□□ 2.09
CNOT9-209ENST00000627282 POLR1AO95602 1720 aaPredicted RBP28.1■■■□□ 2.09
CNOT9-209ENST00000627282 FOXD1Q16676 465 aa28.1■■■□□ 2.09
CNOT9-209ENST00000627282 UBR1Q8IWV7 1749 aa28.09■■■□□ 2.09
CNOT9-209ENST00000627282 SYNMO15061 1565 aa28.08■■■□□ 2.09
CNOT9-209ENST00000627282 NEURL4Q96JN8 1562 aa28.07■■■□□ 2.08
CNOT9-209ENST00000627282 ILDR1Q86SU0 546 aaPredicted RBP28.07■■■□□ 2.08
CNOT9-209ENST00000627282 ANKLE2Q86XL3 938 aa28.07■■■□□ 2.08
CNOT9-209ENST00000627282 CERKQ8TCT0 537 aa28.04■■■□□ 2.08
CNOT9-209ENST00000627282 PIK3C2BO00750 1634 aa28.04■■■□□ 2.08
CNOT9-209ENST00000627282 SPHKAPQ2M3C7 1700 aa28.03■■■□□ 2.08
CNOT9-209ENST00000627282 MED14O60244 1454 aa28.01■■■□□ 2.07
CNOT9-209ENST00000627282 IDI1Q13907 227 aa28.01■■■□□ 2.07
CNOT9-209ENST00000627282 LTBP4Q8N2S1 1624 aa28■■■□□ 2.07
CNOT9-209ENST00000627282 KDM5AP29375 1690 aaKnown RBP28■■■□□ 2.07
CNOT9-209ENST00000627282 FBXO41Q8TF61 875 aa28■■■□□ 2.07
CNOT9-209ENST00000627282 SLC52A1Q9NWF4 448 aa28■■■□□ 2.07
CNOT9-209ENST00000627282 SLIT1O75093 1534 aa27.99■■■□□ 2.07
CNOT9-209ENST00000627282 TRPM2O94759 1503 aa27.99■■■□□ 2.07
CNOT9-209ENST00000627282 ARHGAP23Q9P227 1491 aa27.99■■■□□ 2.07
CNOT9-209ENST00000627282 DHX57Q6P158 1386 aaKnown RBP27.98■■■□□ 2.07
CNOT9-209ENST00000627282 NPHP4O75161 1426 aaPredicted RBP27.98■■■□□ 2.07
CNOT9-209ENST00000627282 ZNF335Q9H4Z2 1342 aaPredicted RBP27.96■■■□□ 2.07
CNOT9-209ENST00000627282 STAG3Q9UJ98 1225 aa27.96■■■□□ 2.07
CNOT9-209ENST00000627282 ADGRB3O60242 1522 aa27.95■■■□□ 2.07
CNOT9-209ENST00000627282 SCAF11Q99590 1463 aaKnown RBP27.94■■■□□ 2.06
CNOT9-209ENST00000627282 ANKRD30BQ9BXX2 1392 aa27.94■■■□□ 2.06
CNOT9-209ENST00000627282 TMEM2Q9UHN6 1383 aa27.94■■■□□ 2.06
CNOT9-209ENST00000627282 IQGAP1P46940 1657 aa27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms