RNA–Protein interactions for RNA: ENST00000615575.4

FAM228B-210, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS P3 TSL 5 BASIC

Gene FAM228B, Length 1,357 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-210ENST00000615575 CPS1P31327 1500 aa29.45■■■□□ 2.31
FAM228B-210ENST00000615575 MTUS2Q5JR59 1369 aa29.45■■■□□ 2.3
FAM228B-210ENST00000615575 TNRQ92752 1358 aa29.44■■■□□ 2.3
FAM228B-210ENST00000615575 SHANK2Q9UPX8 1470 aa29.44■■■□□ 2.3
FAM228B-210ENST00000615575 FBXO31Q5XUX0 539 aaPredicted RBP29.43■■■□□ 2.3
FAM228B-210ENST00000615575 VWDEQ8N2E2 1590 aa29.4■■■□□ 2.3
FAM228B-210ENST00000615575 ALKQ9UM73 1620 aa29.4■■■□□ 2.3
FAM228B-210ENST00000615575 KDM5DQ9BY66 1539 aa29.4■■■□□ 2.3
FAM228B-210ENST00000615575 PZPP20742 1482 aa29.39■■■□□ 2.3
FAM228B-210ENST00000615575 DHX29Q7Z478 1369 aaKnown RBP29.38■■■□□ 2.29
FAM228B-210ENST00000615575 RTEL1-TNFRSF6BF6WH68 1400 aa29.37■■■□□ 2.29
FAM228B-210ENST00000615575 EHBP1L1Q8N3D4 1523 aa29.37■■■□□ 2.29
FAM228B-210ENST00000615575 TOM1O60784 492 aa29.37■■■□□ 2.29
FAM228B-210ENST00000615575 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.35■■■□□ 2.29
FAM228B-210ENST00000615575 KIF3BO15066 747 aa29.34■■■□□ 2.29
FAM228B-210ENST00000615575 FAM135AQ9P2D6 1515 aa29.3■■■□□ 2.28
FAM228B-210ENST00000615575 CCDC141Q6ZP82 1450 aa29.3■■■□□ 2.28
FAM228B-210ENST00000615575 UGGT1Q9NYU2 1555 aa29.29■■■□□ 2.28
FAM228B-210ENST00000615575 NPHP4O75161 1426 aaPredicted RBP29.29■■■□□ 2.28
FAM228B-210ENST00000615575 STRCP1A6NGW2 1772 aa29.28■■■□□ 2.28
FAM228B-210ENST00000615575 CEP162Q5TB80 1403 aa29.28■■■□□ 2.28
FAM228B-210ENST00000615575 DEPDC5O75140 1603 aa29.28■■■□□ 2.28
FAM228B-210ENST00000615575 CAMSAP2Q08AD1 1489 aa29.27■■■□□ 2.28
FAM228B-210ENST00000615575 IQGAP1P46940 1657 aa29.27■■■□□ 2.28
FAM228B-210ENST00000615575 ANKLE2Q86XL3 938 aa29.26■■■□□ 2.28
FAM228B-210ENST00000615575 SENP3Q9H4L4 574 aaPredicted RBP29.26■■■□□ 2.28
FAM228B-210ENST00000615575 MIA2Q96PC5 1412 aa29.26■■■□□ 2.27
FAM228B-210ENST00000615575 MED14O60244 1454 aa29.26■■■□□ 2.27
FAM228B-210ENST00000615575 NLRP1Q9C000 1473 aa29.26■■■□□ 2.27
FAM228B-210ENST00000615575 WASHC2CQ9Y4E1 1318 aa29.24■■■□□ 2.27
FAM228B-210ENST00000615575 PHF23Q9BUL5 403 aaPredicted RBP29.24■■■□□ 2.27
FAM228B-210ENST00000615575 THEMISQ8N1K5 641 aaPredicted RBP29.2■■■□□ 2.26
FAM228B-210ENST00000615575 RNF17Q9BXT8 1623 aaKnown RBP29.19■■■□□ 2.26
FAM228B-210ENST00000615575 LRRC7Q96NW7 1537 aa29.19■■■□□ 2.26
FAM228B-210ENST00000615575 NCOA2Q15596 1464 aa29.18■■■□□ 2.26
FAM228B-210ENST00000615575 SYNMO15061 1565 aa29.16■■■□□ 2.26
FAM228B-210ENST00000615575 ABCC3O15438 1527 aa29.15■■■□□ 2.26
FAM228B-210ENST00000615575 ARHGEF5Q12774 1597 aa29.13■■■□□ 2.25
FAM228B-210ENST00000615575 ZC3H13Q5T200 1668 aaKnown RBP29.13■■■□□ 2.25
FAM228B-210ENST00000615575 ERVK-7P63135 1459 aa29.1■■■□□ 2.25
FAM228B-210ENST00000615575 MROH1Q8NDA8 1641 aa29.07■■■□□ 2.24
FAM228B-210ENST00000615575 CEP152O94986 1710 aa29.07■■■□□ 2.24
FAM228B-210ENST00000615575 UBR1Q8IWV7 1749 aa29.07■■■□□ 2.24
FAM228B-210ENST00000615575 RSPH4AQ5TD94 716 aa29.02■■■□□ 2.24
FAM228B-210ENST00000615575 XIRP1Q702N8 1843 aaKnown RBP29.02■■■□□ 2.24
FAM228B-210ENST00000615575 CFAP65Q6ZU64 1925 aaKnown RBP29.02■■■□□ 2.24
FAM228B-210ENST00000615575 MAST1Q9Y2H9 1570 aa29.01■■■□□ 2.23
FAM228B-210ENST00000615575 EIF2AK4Q9P2K8 1649 aaKnown RBP29.01■■■□□ 2.23
FAM228B-210ENST00000615575 SCAF11Q99590 1463 aaKnown RBP29■■■□□ 2.23
FAM228B-210ENST00000615575 RGS17Q9UGC6 210 aaPredicted RBP29■■■□□ 2.23
FAM228B-210ENST00000615575 TSPY4P0CV99 314 aa28.99■■■□□ 2.23
FAM228B-210ENST00000615575 TSPY10P0CW01 314 aa28.99■■■□□ 2.23
FAM228B-210ENST00000615575 ARHGAP23Q9P227 1491 aa28.94■■■□□ 2.22
FAM228B-210ENST00000615575 LTKP29376 864 aa28.93■■■□□ 2.22
FAM228B-210ENST00000615575 SLIT1O75093 1534 aa28.92■■■□□ 2.22
FAM228B-210ENST00000615575 TXNDC2Q86VQ3 553 aa28.87■■■□□ 2.21
FAM228B-210ENST00000615575 LRRC9Q6ZRR7 1453 aa28.86■■■□□ 2.21
FAM228B-210ENST00000615575 PIK3C2BO00750 1634 aa28.86■■■□□ 2.21
FAM228B-210ENST00000615575 PRDM15P57071 1507 aaPredicted RBP28.85■■■□□ 2.21
FAM228B-210ENST00000615575 DUOX2Q9NRD8 1548 aa28.84■■■□□ 2.21
FAM228B-210ENST00000615575 POTEAQ6S8J7 498 aa28.81■■■□□ 2.2
FAM228B-210ENST00000615575 ROBO1Q9Y6N7 1651 aa28.79■■■□□ 2.2
FAM228B-210ENST00000615575 ARHGAP31Q2M1Z3 1444 aa28.79■■■□□ 2.2
FAM228B-210ENST00000615575 FAM135BQ49AJ0 1406 aa28.79■■■□□ 2.2
FAM228B-210ENST00000615575 MAP3K1Q13233 1512 aa28.79■■■□□ 2.2
FAM228B-210ENST00000615575 TMEM94Q12767 1356 aa28.78■■■□□ 2.2
FAM228B-210ENST00000615575 SETD1AO15047 1707 aaKnown RBP28.77■■■□□ 2.2
FAM228B-210ENST00000615575 MYOM3Q5VTT5 1437 aa28.76■■■□□ 2.19
FAM228B-210ENST00000615575 CROCC2H7BZ55 1655 aa28.76■■■□□ 2.19
FAM228B-210ENST00000615575 KIF15Q9NS87 1388 aa28.75■■■□□ 2.19
FAM228B-210ENST00000615575 TMEM2Q9UHN6 1383 aa28.75■■■□□ 2.19
FAM228B-210ENST00000615575 EID1Q9Y6B2 187 aa28.75■■■□□ 2.19
FAM228B-210ENST00000615575 KANK4Q5T7N3 995 aaPredicted RBP28.74■■■□□ 2.19
FAM228B-210ENST00000615575 RBM33Q96EV2 1170 aaKnown RBP28.74■■■□□ 2.19
FAM228B-210ENST00000615575 VPS8Q8N3P4 1428 aa28.72■■■□□ 2.19
FAM228B-210ENST00000615575 EFCAB6Q5THR3 1501 aa28.72■■■□□ 2.19
FAM228B-210ENST00000615575 ERBINQ96RT1 1412 aa28.71■■■□□ 2.19
FAM228B-210ENST00000615575 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.69■■■□□ 2.18
FAM228B-210ENST00000615575 TET3O43151 1660 aa28.68■■■□□ 2.18
FAM228B-210ENST00000615575 KDM5AP29375 1690 aaKnown RBP28.68■■■□□ 2.18
FAM228B-210ENST00000615575 RRP7BPQ9NSQ0 103 aa28.67■■■□□ 2.18
FAM228B-210ENST00000615575 ABCC5O15440 1437 aa28.66■■■□□ 2.18
FAM228B-210ENST00000615575 SLC26A8Q96RN1 970 aa28.66■■■□□ 2.18
FAM228B-210ENST00000615575 STAG3Q9UJ98 1225 aa28.66■■■□□ 2.18
FAM228B-210ENST00000615575 NWD1Q149M9 1564 aa28.66■■■□□ 2.18
FAM228B-210ENST00000615575 KCNA6P17658 529 aa28.64■■■□□ 2.18
FAM228B-210ENST00000615575 PROSER2Q86WR7 435 aaPredicted RBP28.62■■■□□ 2.17
FAM228B-210ENST00000615575 PHLPP1O60346 1717 aa28.62■■■□□ 2.17
FAM228B-210ENST00000615575 IDI1Q13907 227 aa28.62■■■□□ 2.17
FAM228B-210ENST00000615575 NKTRP30414 1462 aaKnown RBP28.62■■■□□ 2.17
FAM228B-210ENST00000615575 ADGRB3O60242 1522 aa28.61■■■□□ 2.17
FAM228B-210ENST00000615575 PTPN23Q9H3S7 1636 aa28.61■■■□□ 2.17
FAM228B-210ENST00000615575 LMTK2Q8IWU2 1503 aa28.6■■■□□ 2.17
FAM228B-210ENST00000615575 KANK1Q14678 1352 aa28.58■■■□□ 2.17
FAM228B-210ENST00000615575 DAPK1P53355 1430 aa28.57■■■□□ 2.16
FAM228B-210ENST00000615575 NOS1P29475 1434 aa28.55■■■□□ 2.16
FAM228B-210ENST00000615575 MSH6P52701 1360 aa28.55■■■□□ 2.16
FAM228B-210ENST00000615575 COL16A1Q07092 1604 aaPredicted RBP28.53■■■□□ 2.16
FAM228B-210ENST00000615575 JCADQ9P266 1359 aa28.51■■■□□ 2.15
FAM228B-210ENST00000615575 MYO5BQ9ULV0 1848 aa28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms