RNA–Protein interactions for RNA: ENST00000610852.1

PDE4DIP-238, Transcript of phosphodiesterase 4D interacting protein, human

TSL 5

Gene PDE4DIP, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDE4DIP-238	ENST00000610852	DEPDC5	O75140	1603 aa		12.97	□□□□□ -0.33
PDE4DIP-238	ENST00000610852	KDM5D	Q9BY66	1539 aa		12.97	□□□□□ -0.33
PDE4DIP-238	ENST00000610852	SIGLEC1	Q9BZZ2	1709 aa		12.96	□□□□□ -0.33
PDE4DIP-238	ENST00000610852	NUP155	O75694	1391 aa		12.96	□□□□□ -0.33
PDE4DIP-238	ENST00000610852	RNF17	Q9BXT8	1623 aa	Known RBP	12.96	□□□□□ -0.33
PDE4DIP-238	ENST00000610852	PRDM15	P57071	1507 aa	Predicted RBP	12.96	□□□□□ -0.33
PDE4DIP-238	ENST00000610852	MROH1	Q8NDA8	1641 aa		12.95	□□□□□ -0.34
PDE4DIP-238	ENST00000610852	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	12.95	□□□□□ -0.34
PDE4DIP-238	ENST00000610852	GGT6	Q6P531	493 aa		12.94	□□□□□ -0.34
PDE4DIP-238	ENST00000610852	VWDE	Q8N2E2	1590 aa		12.94	□□□□□ -0.34
PDE4DIP-238	ENST00000610852	KANK1	Q14678	1352 aa		12.94	□□□□□ -0.34
PDE4DIP-238	ENST00000610852	PZP	P20742	1482 aa		12.93	□□□□□ -0.34
PDE4DIP-238	ENST00000610852	DHX57	Q6P158	1386 aa	Known RBP	12.93	□□□□□ -0.34
PDE4DIP-238	ENST00000610852	ARID4B	Q4LE39	1312 aa	Predicted RBP	12.92	□□□□□ -0.34
PDE4DIP-238	ENST00000610852	IQGAP3	Q86VI3	1631 aa		12.92	□□□□□ -0.34
PDE4DIP-238	ENST00000610852	MPHOSPH9	Q99550	1183 aa		12.92	□□□□□ -0.34
PDE4DIP-238	ENST00000610852	FAM135A	Q9P2D6	1515 aa		12.92	□□□□□ -0.34
PDE4DIP-238	ENST00000610852	SLC4A1AP	Q9BWU0	796 aa	Known RBP	12.91	□□□□□ -0.34
PDE4DIP-238	ENST00000610852	PPP6R1	Q9UPN7	881 aa		12.91	□□□□□ -0.34
PDE4DIP-238	ENST00000610852	LMTK2	Q8IWU2	1503 aa		12.9	□□□□□ -0.34
PDE4DIP-238	ENST00000610852	MLEC	Q14165	292 aa		12.89	□□□□□ -0.35
PDE4DIP-238	ENST00000610852	WASHC2C	Q9Y4E1	1318 aa		12.88	□□□□□ -0.35
PDE4DIP-238	ENST00000610852	ABCC3	O15438	1527 aa		12.88	□□□□□ -0.35
PDE4DIP-238	ENST00000610852	ZC3H13	Q5T200	1668 aa	Known RBP	12.87	□□□□□ -0.35
PDE4DIP-238	ENST00000610852	PKD2	Q13563	968 aa		12.87	□□□□□ -0.35
PDE4DIP-238	ENST00000610852	AEBP2	Q6ZN18	517 aa	Predicted RBP	12.87	□□□□□ -0.35
PDE4DIP-238	ENST00000610852	CCER1	Q8TC90	406 aa	Predicted RBP	12.87	□□□□□ -0.35
PDE4DIP-238	ENST00000610852	TET3	O43151	1660 aa		12.86	□□□□□ -0.35
PDE4DIP-238	ENST00000610852	EFCAB6	Q5THR3	1501 aa		12.85	□□□□□ -0.35
PDE4DIP-238	ENST00000610852	CEP152	O94986	1710 aa		12.85	□□□□□ -0.35
PDE4DIP-238	ENST00000610852	ARHGAP31	Q2M1Z3	1444 aa		12.84	□□□□□ -0.35
PDE4DIP-238	ENST00000610852	CLSPN	Q9HAW4	1339 aa		12.84	□□□□□ -0.35
PDE4DIP-238	ENST00000610852	CAMSAP1	Q5T5Y3	1602 aa		12.84	□□□□□ -0.35
PDE4DIP-238	ENST00000610852	CNTLN	Q9NXG0	1405 aa		12.83	□□□□□ -0.36
PDE4DIP-238	ENST00000610852	FOXD1	Q16676	465 aa		12.83	□□□□□ -0.36
PDE4DIP-238	ENST00000610852	ESF1	Q9H501	851 aa	Known RBP	12.83	□□□□□ -0.36
PDE4DIP-238	ENST00000610852		E9PCH4	1651 aa		12.83	□□□□□ -0.36
PDE4DIP-238	ENST00000610852	NPAT	Q14207	1427 aa		12.82	□□□□□ -0.36
PDE4DIP-238	ENST00000610852	RPRD2	Q5VT52	1461 aa	Known RBP	12.82	□□□□□ -0.36
PDE4DIP-238	ENST00000610852	CLTC	Q00610	1675 aa	Known RBP	12.82	□□□□□ -0.36
PDE4DIP-238	ENST00000610852	ANKRD30B	Q9BXX2	1392 aa		12.81	□□□□□ -0.36
PDE4DIP-238	ENST00000610852	ZMYM3	Q14202	1370 aa		12.8	□□□□□ -0.36
PDE4DIP-238	ENST00000610852	MROH2A	A6NES4	1674 aa		12.8	□□□□□ -0.36
PDE4DIP-238	ENST00000610852	ADAMTSL3	P82987	1691 aa		12.8	□□□□□ -0.36
PDE4DIP-238	ENST00000610852	PTPRT	O14522	1441 aa		12.79	□□□□□ -0.36
PDE4DIP-238	ENST00000610852	PLA2R1	Q13018	1463 aa		12.79	□□□□□ -0.36
PDE4DIP-238	ENST00000610852	FER1L4	A9Z1Z3	1794 aa		12.79	□□□□□ -0.36
PDE4DIP-238	ENST00000610852	MADD	Q8WXG6	1647 aa		12.78	□□□□□ -0.36
PDE4DIP-238	ENST00000610852	NOS1	P29475	1434 aa		12.77	□□□□□ -0.37
PDE4DIP-238	ENST00000610852	TRPM2	O94759	1503 aa		12.76	□□□□□ -0.37
PDE4DIP-238	ENST00000610852	ERVK-7	P63135	1459 aa		12.75	□□□□□ -0.37
PDE4DIP-238	ENST00000610852	SPHKAP	Q2M3C7	1700 aa		12.75	□□□□□ -0.37
PDE4DIP-238	ENST00000610852	FBXO31	Q5XUX0	539 aa	Predicted RBP	12.75	□□□□□ -0.37
PDE4DIP-238	ENST00000610852	SIN3A	Q96ST3	1273 aa		12.75	□□□□□ -0.37
PDE4DIP-238	ENST00000610852	RIMS1	Q86UR5	1692 aa	Known RBP	12.74	□□□□□ -0.37
PDE4DIP-238	ENST00000610852	PREX1	Q8TCU6	1659 aa		12.74	□□□□□ -0.37
PDE4DIP-238	ENST00000610852	SPATA31D1	Q6ZQQ2	1576 aa		12.74	□□□□□ -0.37
PDE4DIP-238	ENST00000610852	CCDC144A	A2RUR9	1427 aa		12.74	□□□□□ -0.37
PDE4DIP-238	ENST00000610852	C3	P01024	1663 aa		12.73	□□□□□ -0.37
PDE4DIP-238	ENST00000610852	CEBPA	P49715	358 aa	Predicted RBP	12.73	□□□□□ -0.37
PDE4DIP-238	ENST00000610852	SYNM	O15061	1565 aa		12.73	□□□□□ -0.37
PDE4DIP-238	ENST00000610852	NEUROD1	Q13562	356 aa		12.72	□□□□□ -0.37
PDE4DIP-238	ENST00000610852	SLC52A1	Q9NWF4	448 aa		12.71	□□□□□ -0.37
PDE4DIP-238	ENST00000610852	UGGT1	Q9NYU2	1555 aa		12.71	□□□□□ -0.37
PDE4DIP-238	ENST00000610852	PTPRM	P28827	1452 aa		12.71	□□□□□ -0.38
PDE4DIP-238	ENST00000610852	PIK3C2B	O00750	1634 aa		12.7	□□□□□ -0.38
PDE4DIP-238	ENST00000610852	CLTCL1	P53675	1640 aa		12.7	□□□□□ -0.38
PDE4DIP-238	ENST00000610852	TNR	Q92752	1358 aa		12.69	□□□□□ -0.38
PDE4DIP-238	ENST00000610852	KDM4F	A0A1W2PPD8	638 aa		12.69	□□□□□ -0.38
PDE4DIP-238	ENST00000610852	IDI1	Q13907	227 aa		12.68	□□□□□ -0.38
PDE4DIP-238	ENST00000610852	TIMELESS	Q9UNS1	1208 aa		12.68	□□□□□ -0.38
PDE4DIP-238	ENST00000610852	PLPPR3	Q6T4P5	718 aa		12.67	□□□□□ -0.38
PDE4DIP-238	ENST00000610852	SPATA31E1	Q6ZUB1	1445 aa		12.67	□□□□□ -0.38
PDE4DIP-238	ENST00000610852	CFAP65	Q6ZU64	1925 aa	Known RBP	12.66	□□□□□ -0.38
PDE4DIP-238	ENST00000610852	NLRP1	Q9C000	1473 aa		12.66	□□□□□ -0.38
PDE4DIP-238	ENST00000610852	NEURL4	Q96JN8	1562 aa		12.66	□□□□□ -0.38
PDE4DIP-238	ENST00000610852	ZEB1	P37275	1124 aa	Predicted RBP	12.66	□□□□□ -0.38
PDE4DIP-238	ENST00000610852	TONSL	Q96HA7	1378 aa		12.66	□□□□□ -0.38
PDE4DIP-238	ENST00000610852	ADGRB3	O60242	1522 aa		12.65	□□□□□ -0.38
PDE4DIP-238	ENST00000610852	CHGA	P10645	457 aa	Known RBP	12.63	□□□□□ -0.39
PDE4DIP-238	ENST00000610852	L3MBTL2	Q969R5	705 aa		12.63	□□□□□ -0.39
PDE4DIP-238	ENST00000610852	TMEM131L	A2VDJ0	1609 aa		12.62	□□□□□ -0.39
PDE4DIP-238	ENST00000610852	MYO3A	Q8NEV4	1616 aa		12.62	□□□□□ -0.39
PDE4DIP-238	ENST00000610852	KIF1B	O60333	1816 aa		12.62	□□□□□ -0.39
PDE4DIP-238	ENST00000610852	RGL3	Q3MIN7	710 aa		12.62	□□□□□ -0.39
PDE4DIP-238	ENST00000610852	A2ML1	A8K2U0	1454 aa		12.61	□□□□□ -0.39
PDE4DIP-238	ENST00000610852	STAG3	Q9UJ98	1225 aa		12.61	□□□□□ -0.39
PDE4DIP-238	ENST00000610852	KDM5A	P29375	1690 aa	Known RBP	12.61	□□□□□ -0.39
PDE4DIP-238	ENST00000610852	ZNF326	Q5BKZ1	582 aa	Known RBP	12.6	□□□□□ -0.39
PDE4DIP-238	ENST00000610852	RPGRIP1L	Q68CZ1	1315 aa		12.6	□□□□□ -0.39
PDE4DIP-238	ENST00000610852	PPP1R15A	O75807	674 aa	Predicted RBP	12.59	□□□□□ -0.39
PDE4DIP-238	ENST00000610852	DCAF11	Q8TEB1	546 aa		12.59	□□□□□ -0.39
PDE4DIP-238	ENST00000610852	STAC3	Q96MF2	364 aa		12.59	□□□□□ -0.39
PDE4DIP-238	ENST00000610852	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	12.59	□□□□□ -0.39
PDE4DIP-238	ENST00000610852	UBR1	Q8IWV7	1749 aa		12.59	□□□□□ -0.39
PDE4DIP-238	ENST00000610852	UHRF1BP1	Q6BDS2	1440 aa		12.58	□□□□□ -0.4
PDE4DIP-238	ENST00000610852	ZNF142	P52746	1687 aa	Predicted RBP	12.57	□□□□□ -0.4
PDE4DIP-238	ENST00000610852	THEMIS	Q8N1K5	641 aa	Predicted RBP	12.57	□□□□□ -0.4
PDE4DIP-238	ENST00000610852	NEXMIF	Q5QGS0	1516 aa		12.57	□□□□□ -0.4
PDE4DIP-238	ENST00000610852	KDM2A	Q9Y2K7	1162 aa		12.56	□□□□□ -0.4

Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms