RNA–Protein interactions for RNA: ENST00000602550.5

HCG18-245, Transcript of HLA complex group 18, humanhuman

TSL 4 BASIC

Gene HCG18, Length 559 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-245ENST00000602550 SHANK2Q9UPX8 1470 aa23.01■■□□□ 1.27
HCG18-245ENST00000602550 ANKLE2Q86XL3 938 aa23.01■■□□□ 1.27
HCG18-245ENST00000602550 POLR1AO95602 1720 aaPredicted RBP23.01■■□□□ 1.27
HCG18-245ENST00000602550 ZNF644Q9H582 1327 aaPredicted RBP23.01■■□□□ 1.27
HCG18-245ENST00000602550 MBD5Q9P267 1494 aa23■■□□□ 1.27
HCG18-245ENST00000602550 MED1Q15648 1581 aaPredicted RBP22.99■■□□□ 1.27
HCG18-245ENST00000602550 KIF3BO15066 747 aa22.99■■□□□ 1.27
HCG18-245ENST00000602550 FBXO31Q5XUX0 539 aaPredicted RBP22.99■■□□□ 1.27
HCG18-245ENST00000602550 THEMISQ8N1K5 641 aaPredicted RBP22.99■■□□□ 1.27
HCG18-245ENST00000602550 FAM135AQ9P2D6 1515 aa22.97■■□□□ 1.27
HCG18-245ENST00000602550 WASHC2CQ9Y4E1 1318 aa22.96■■□□□ 1.27
HCG18-245ENST00000602550 PZPP20742 1482 aa22.96■■□□□ 1.27
HCG18-245ENST00000602550 NEURL4Q96JN8 1562 aa22.96■■□□□ 1.27
HCG18-245ENST00000602550 RSPH4AQ5TD94 716 aa22.95■■□□□ 1.26
HCG18-245ENST00000602550 TIAM1Q13009 1591 aa22.94■■□□□ 1.26
HCG18-245ENST00000602550 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.93■■□□□ 1.26
HCG18-245ENST00000602550 KDM5DQ9BY66 1539 aa22.92■■□□□ 1.26
HCG18-245ENST00000602550 MIA2Q96PC5 1412 aa22.92■■□□□ 1.26
HCG18-245ENST00000602550 PHF23Q9BUL5 403 aaPredicted RBP22.92■■□□□ 1.26
HCG18-245ENST00000602550 EHBP1L1Q8N3D4 1523 aa22.91■■□□□ 1.26
HCG18-245ENST00000602550 NLRP1Q9C000 1473 aa22.91■■□□□ 1.26
HCG18-245ENST00000602550 CEP162Q5TB80 1403 aa22.9■■□□□ 1.26
HCG18-245ENST00000602550 MED14O60244 1454 aa22.89■■□□□ 1.25
HCG18-245ENST00000602550 NPHP4O75161 1426 aaPredicted RBP22.89■■□□□ 1.25
HCG18-245ENST00000602550 VWDEQ8N2E2 1590 aa22.89■■□□□ 1.25
HCG18-245ENST00000602550 UGGT1Q9NYU2 1555 aa22.89■■□□□ 1.25
HCG18-245ENST00000602550 CCDC141Q6ZP82 1450 aa22.88■■□□□ 1.25
HCG18-245ENST00000602550 DEPDC5O75140 1603 aa22.87■■□□□ 1.25
HCG18-245ENST00000602550 TSPY4P0CV99 314 aa22.84■■□□□ 1.25
HCG18-245ENST00000602550 TSPY10P0CW01 314 aa22.84■■□□□ 1.25
HCG18-245ENST00000602550 IQGAP1P46940 1657 aa22.81■■□□□ 1.24
HCG18-245ENST00000602550 CAMSAP2Q08AD1 1489 aa22.81■■□□□ 1.24
HCG18-245ENST00000602550 ALKQ9UM73 1620 aa22.79■■□□□ 1.24
HCG18-245ENST00000602550 NCOA2Q15596 1464 aa22.77■■□□□ 1.24
HCG18-245ENST00000602550 LRRC7Q96NW7 1537 aa22.77■■□□□ 1.24
HCG18-245ENST00000602550 ARHGEF5Q12774 1597 aa22.76■■□□□ 1.23
HCG18-245ENST00000602550 STRCP1A6NGW2 1772 aa22.73■■□□□ 1.23
HCG18-245ENST00000602550 SYNMO15061 1565 aa22.73■■□□□ 1.23
HCG18-245ENST00000602550 RNF17Q9BXT8 1623 aaKnown RBP22.73■■□□□ 1.23
HCG18-245ENST00000602550 SENP3Q9H4L4 574 aaPredicted RBP22.73■■□□□ 1.23
HCG18-245ENST00000602550 ZC3H13Q5T200 1668 aaKnown RBP22.72■■□□□ 1.23
HCG18-245ENST00000602550 ABCC3O15438 1527 aa22.71■■□□□ 1.23
HCG18-245ENST00000602550 CFAP65Q6ZU64 1925 aaKnown RBP22.7■■□□□ 1.22
HCG18-245ENST00000602550 ERVK-7P63135 1459 aa22.69■■□□□ 1.22
HCG18-245ENST00000602550 SCAF11Q99590 1463 aaKnown RBP22.66■■□□□ 1.22
HCG18-245ENST00000602550 EIF2AK4Q9P2K8 1649 aaKnown RBP22.65■■□□□ 1.22
HCG18-245ENST00000602550 TXNDC2Q86VQ3 553 aa22.65■■□□□ 1.22
HCG18-245ENST00000602550 MAST1Q9Y2H9 1570 aa22.64■■□□□ 1.22
HCG18-245ENST00000602550 UBR1Q8IWV7 1749 aa22.64■■□□□ 1.21
HCG18-245ENST00000602550 EID1Q9Y6B2 187 aa22.63■■□□□ 1.21
HCG18-245ENST00000602550 LTKP29376 864 aa22.62■■□□□ 1.21
HCG18-245ENST00000602550 RGS17Q9UGC6 210 aaPredicted RBP22.62■■□□□ 1.21
HCG18-245ENST00000602550 ARHGAP23Q9P227 1491 aa22.6■■□□□ 1.21
HCG18-245ENST00000602550 SLIT1O75093 1534 aa22.59■■□□□ 1.21
HCG18-245ENST00000602550 CEP152O94986 1710 aa22.59■■□□□ 1.21
HCG18-245ENST00000602550 FAM135BQ49AJ0 1406 aa22.57■■□□□ 1.2
HCG18-245ENST00000602550 MROH1Q8NDA8 1641 aa22.57■■□□□ 1.2
HCG18-245ENST00000602550 ARHGAP31Q2M1Z3 1444 aa22.57■■□□□ 1.2
HCG18-245ENST00000602550 XIRP1Q702N8 1843 aaKnown RBP22.56■■□□□ 1.2
HCG18-245ENST00000602550 DUOX2Q9NRD8 1548 aa22.56■■□□□ 1.2
HCG18-245ENST00000602550 LRRC9Q6ZRR7 1453 aa22.55■■□□□ 1.2
HCG18-245ENST00000602550 STAG3Q9UJ98 1225 aa22.54■■□□□ 1.2
HCG18-245ENST00000602550 MYOM3Q5VTT5 1437 aa22.53■■□□□ 1.2
HCG18-245ENST00000602550 TMEM2Q9UHN6 1383 aa22.5■■□□□ 1.19
HCG18-245ENST00000602550 KCNA6P17658 529 aa22.5■■□□□ 1.19
HCG18-245ENST00000602550 TMEM94Q12767 1356 aa22.49■■□□□ 1.19
HCG18-245ENST00000602550 POTEAQ6S8J7 498 aa22.48■■□□□ 1.19
HCG18-245ENST00000602550 PRDM15P57071 1507 aaPredicted RBP22.47■■□□□ 1.19
HCG18-245ENST00000602550 PROSER2Q86WR7 435 aaPredicted RBP22.47■■□□□ 1.19
HCG18-245ENST00000602550 KIF15Q9NS87 1388 aa22.47■■□□□ 1.19
HCG18-245ENST00000602550 ERBINQ96RT1 1412 aa22.47■■□□□ 1.19
HCG18-245ENST00000602550 PIK3C2BO00750 1634 aa22.46■■□□□ 1.19
HCG18-245ENST00000602550 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.46■■□□□ 1.192e-6■■□□□ 11.6
HCG18-245ENST00000602550 KANK1Q14678 1352 aa22.46■■□□□ 1.19
HCG18-245ENST00000602550 VPS8Q8N3P4 1428 aa22.45■■□□□ 1.18
HCG18-245ENST00000602550 KDM5AP29375 1690 aaKnown RBP22.45■■□□□ 1.18
HCG18-245ENST00000602550 RRP7BPQ9NSQ0 103 aa22.44■■□□□ 1.18
HCG18-245ENST00000602550 MAP3K1Q13233 1512 aa22.43■■□□□ 1.18
HCG18-245ENST00000602550 IDI1Q13907 227 aa22.43■■□□□ 1.18
HCG18-245ENST00000602550 KANK4Q5T7N3 995 aaPredicted RBP22.43■■□□□ 1.18
HCG18-245ENST00000602550 ROBO1Q9Y6N7 1651 aa22.42■■□□□ 1.18
HCG18-245ENST00000602550 EFCAB6Q5THR3 1501 aa22.42■■□□□ 1.18
HCG18-245ENST00000602550 SLC26A8Q96RN1 970 aa22.42■■□□□ 1.18
HCG18-245ENST00000602550 TET3O43151 1660 aa22.39■■□□□ 1.17
HCG18-245ENST00000602550 ABCC5O15440 1437 aa22.38■■□□□ 1.17
HCG18-245ENST00000602550 MSH6P52701 1360 aa22.38■■□□□ 1.17
HCG18-245ENST00000602550 RBM33Q96EV2 1170 aaKnown RBP22.37■■□□□ 1.17
HCG18-245ENST00000602550 NKTRP30414 1462 aaKnown RBP22.36■■□□□ 1.17
HCG18-245ENST00000602550 BCANQ96GW7 911 aa22.36■■□□□ 1.17
HCG18-245ENST00000602550 SLAIN2Q9P270 581 aa22.36■■□□□ 1.17
HCG18-245ENST00000602550 SLC52A1Q9NWF4 448 aa22.35■■□□□ 1.17
HCG18-245ENST00000602550 CROCC2H7BZ55 1655 aa22.35■■□□□ 1.17
HCG18-245ENST00000602550 LMTK2Q8IWU2 1503 aa22.35■■□□□ 1.17
HCG18-245ENST00000602550 JCADQ9P266 1359 aa22.34■■□□□ 1.17
HCG18-245ENST00000602550 NWD1Q149M9 1564 aa22.32■■□□□ 1.16
HCG18-245ENST00000602550 ANKRD30AQ9BXX3 1397 aa22.31■■□□□ 1.16
HCG18-245ENST00000602550 HDGFP51858 240 aaKnown RBP22.31■■□□□ 1.16
HCG18-245ENST00000602550 PHLPP1O60346 1717 aa22.31■■□□□ 1.16
HCG18-245ENST00000602550 PTPN23Q9H3S7 1636 aa22.31■■□□□ 1.16
HCG18-245ENST00000602550 NOS1P29475 1434 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms