RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 PIP4K2BP78356 416 aa26.18■■□□□ 1.78
SSBP4-211ENST00000601614 FBXO31Q5XUX0 539 aaPredicted RBP26.18■■□□□ 1.78
SSBP4-211ENST00000601614 SHANK2Q9UPX8 1470 aa26.17■■□□□ 1.78
SSBP4-211ENST00000601614 ALKQ9UM73 1620 aa26.17■■□□□ 1.78
SSBP4-211ENST00000601614 MTUS2Q5JR59 1369 aa26.15■■□□□ 1.78
SSBP4-211ENST00000601614 TNRQ92752 1358 aa26.15■■□□□ 1.78
SSBP4-211ENST00000601614 VWDEQ8N2E2 1590 aa26.15■■□□□ 1.78
SSBP4-211ENST00000601614 DHX29Q7Z478 1369 aaKnown RBP26.14■■□□□ 1.78
SSBP4-211ENST00000601614 RTEL1-TNFRSF6BF6WH68 1400 aa26.14■■□□□ 1.77
SSBP4-211ENST00000601614 PZPP20742 1482 aa26.13■■□□□ 1.77
SSBP4-211ENST00000601614 KDM5DQ9BY66 1539 aa26.11■■□□□ 1.77
SSBP4-211ENST00000601614 TOM1O60784 492 aa26.11■■□□□ 1.77
SSBP4-211ENST00000601614 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.09■■□□□ 1.778e-7■■■■□ 20.6
SSBP4-211ENST00000601614 EHBP1L1Q8N3D4 1523 aa26.09■■□□□ 1.77
SSBP4-211ENST00000601614 STRCP1A6NGW2 1772 aa26.08■■□□□ 1.77
SSBP4-211ENST00000601614 KIF3BO15066 747 aa26.08■■□□□ 1.77
SSBP4-211ENST00000601614 FAM135AQ9P2D6 1515 aa26.06■■□□□ 1.76
SSBP4-211ENST00000601614 DEPDC5O75140 1603 aa26.06■■□□□ 1.76
SSBP4-211ENST00000601614 MED14O60244 1454 aa26.04■■□□□ 1.76
SSBP4-211ENST00000601614 UGGT1Q9NYU2 1555 aa26.04■■□□□ 1.76
SSBP4-211ENST00000601614 ANKLE2Q86XL3 938 aa26.03■■□□□ 1.76
SSBP4-211ENST00000601614 NPHP4O75161 1426 aaPredicted RBP26.03■■□□□ 1.76
SSBP4-211ENST00000601614 CEP162Q5TB80 1403 aa26.03■■□□□ 1.76
SSBP4-211ENST00000601614 MIA2Q96PC5 1412 aa26.03■■□□□ 1.76
SSBP4-211ENST00000601614 CCDC141Q6ZP82 1450 aa26.03■■□□□ 1.76
SSBP4-211ENST00000601614 IQGAP1P46940 1657 aa26.03■■□□□ 1.76
SSBP4-211ENST00000601614 NLRP1Q9C000 1473 aa26.01■■□□□ 1.75
SSBP4-211ENST00000601614 CAMSAP2Q08AD1 1489 aa26■■□□□ 1.75
SSBP4-211ENST00000601614 WASHC2CQ9Y4E1 1318 aa25.99■■□□□ 1.75
SSBP4-211ENST00000601614 THEMISQ8N1K5 641 aaPredicted RBP25.98■■□□□ 1.75
SSBP4-211ENST00000601614 LRRC7Q96NW7 1537 aa25.95■■□□□ 1.74
SSBP4-211ENST00000601614 NCOA2Q15596 1464 aa25.94■■□□□ 1.74
SSBP4-211ENST00000601614 RNF17Q9BXT8 1623 aaKnown RBP25.93■■□□□ 1.74
SSBP4-211ENST00000601614 PHF23Q9BUL5 403 aaPredicted RBP25.93■■□□□ 1.74
SSBP4-211ENST00000601614 SENP3Q9H4L4 574 aaPredicted RBP25.93■■□□□ 1.74
SSBP4-211ENST00000601614 ZC3H13Q5T200 1668 aaKnown RBP25.93■■□□□ 1.74
SSBP4-211ENST00000601614 SYNMO15061 1565 aa25.91■■□□□ 1.74
SSBP4-211ENST00000601614 ARHGEF5Q12774 1597 aa25.91■■□□□ 1.74
SSBP4-211ENST00000601614 CFAP65Q6ZU64 1925 aaKnown RBP25.9■■□□□ 1.74
SSBP4-211ENST00000601614 ABCC3O15438 1527 aa25.9■■□□□ 1.74
SSBP4-211ENST00000601614 XIRP1Q702N8 1843 aaKnown RBP25.87■■□□□ 1.73
SSBP4-211ENST00000601614 UBR1Q8IWV7 1749 aa25.87■■□□□ 1.73
SSBP4-211ENST00000601614 ERVK-7P63135 1459 aa25.86■■□□□ 1.73
SSBP4-211ENST00000601614 MROH1Q8NDA8 1641 aa25.86■■□□□ 1.73
SSBP4-211ENST00000601614 RSPH4AQ5TD94 716 aa25.86■■□□□ 1.73
SSBP4-211ENST00000601614 CEP152O94986 1710 aa25.85■■□□□ 1.73
SSBP4-211ENST00000601614 MAST1Q9Y2H9 1570 aa25.82■■□□□ 1.72
SSBP4-211ENST00000601614 EIF2AK4Q9P2K8 1649 aaKnown RBP25.81■■□□□ 1.72
SSBP4-211ENST00000601614 RGS17Q9UGC6 210 aaPredicted RBP25.81■■□□□ 1.72
SSBP4-211ENST00000601614 TSPY4P0CV99 314 aa25.78■■□□□ 1.72
SSBP4-211ENST00000601614 TSPY10P0CW01 314 aa25.78■■□□□ 1.72
SSBP4-211ENST00000601614 SCAF11Q99590 1463 aaKnown RBP25.77■■□□□ 1.72
SSBP4-211ENST00000601614 ARHGAP23Q9P227 1491 aa25.75■■□□□ 1.71
SSBP4-211ENST00000601614 LTKP29376 864 aa25.74■■□□□ 1.71
SSBP4-211ENST00000601614 SLIT1O75093 1534 aa25.73■■□□□ 1.71
SSBP4-211ENST00000601614 PIK3C2BO00750 1634 aa25.67■■□□□ 1.7
SSBP4-211ENST00000601614 TXNDC2Q86VQ3 553 aa25.67■■□□□ 1.7
SSBP4-211ENST00000601614 LRRC9Q6ZRR7 1453 aa25.66■■□□□ 1.7
SSBP4-211ENST00000601614 PRDM15P57071 1507 aaPredicted RBP25.64■■□□□ 1.7
SSBP4-211ENST00000601614 DUOX2Q9NRD8 1548 aa25.64■■□□□ 1.7
SSBP4-211ENST00000601614 ARHGAP31Q2M1Z3 1444 aa25.63■■□□□ 1.69
SSBP4-211ENST00000601614 FAM135BQ49AJ0 1406 aa25.62■■□□□ 1.69
SSBP4-211ENST00000601614 POTEAQ6S8J7 498 aa25.61■■□□□ 1.69
SSBP4-211ENST00000601614 ROBO1Q9Y6N7 1651 aa25.61■■□□□ 1.69
SSBP4-211ENST00000601614 MAP3K1Q13233 1512 aa25.58■■□□□ 1.69
SSBP4-211ENST00000601614 CROCC2H7BZ55 1655 aa25.58■■□□□ 1.68
SSBP4-211ENST00000601614 TMEM94Q12767 1356 aa25.57■■□□□ 1.68
SSBP4-211ENST00000601614 TMEM2Q9UHN6 1383 aa25.57■■□□□ 1.68
SSBP4-211ENST00000601614 KANK4Q5T7N3 995 aaPredicted RBP25.57■■□□□ 1.68
SSBP4-211ENST00000601614 MYOM3Q5VTT5 1437 aa25.56■■□□□ 1.68
SSBP4-211ENST00000601614 SETD1AO15047 1707 aaKnown RBP25.55■■□□□ 1.68
SSBP4-211ENST00000601614 EID1Q9Y6B2 187 aa25.55■■□□□ 1.68
SSBP4-211ENST00000601614 KDM5AP29375 1690 aaKnown RBP25.55■■□□□ 1.68
SSBP4-211ENST00000601614 TET3O43151 1660 aa25.54■■□□□ 1.68
SSBP4-211ENST00000601614 KIF15Q9NS87 1388 aa25.54■■□□□ 1.68
SSBP4-211ENST00000601614 RBM33Q96EV2 1170 aaKnown RBP25.53■■□□□ 1.68
SSBP4-211ENST00000601614 VPS8Q8N3P4 1428 aa25.53■■□□□ 1.68
SSBP4-211ENST00000601614 ERBINQ96RT1 1412 aa25.52■■□□□ 1.68
SSBP4-211ENST00000601614 EFCAB6Q5THR3 1501 aa25.52■■□□□ 1.68
SSBP4-211ENST00000601614 ABCC5O15440 1437 aa25.5■■□□□ 1.67
SSBP4-211ENST00000601614 NWD1Q149M9 1564 aa25.48■■□□□ 1.67
SSBP4-211ENST00000601614 KCNA6P17658 529 aa25.48■■□□□ 1.67
SSBP4-211ENST00000601614 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.48■■□□□ 1.67
SSBP4-211ENST00000601614 RRP7BPQ9NSQ0 103 aa25.48■■□□□ 1.67
SSBP4-211ENST00000601614 IDI1Q13907 227 aa25.47■■□□□ 1.67
SSBP4-211ENST00000601614 SLC26A8Q96RN1 970 aa25.47■■□□□ 1.67
SSBP4-211ENST00000601614 PROSER2Q86WR7 435 aaPredicted RBP25.46■■□□□ 1.67
SSBP4-211ENST00000601614 STAG3Q9UJ98 1225 aa25.45■■□□□ 1.66
SSBP4-211ENST00000601614 PHLPP1O60346 1717 aa25.45■■□□□ 1.66
SSBP4-211ENST00000601614 LMTK2Q8IWU2 1503 aa25.44■■□□□ 1.66
SSBP4-211ENST00000601614 PTPN23Q9H3S7 1636 aa25.44■■□□□ 1.66
SSBP4-211ENST00000601614 NKTRP30414 1462 aaKnown RBP25.43■■□□□ 1.66
SSBP4-211ENST00000601614 ADGRB3O60242 1522 aa25.42■■□□□ 1.66
SSBP4-211ENST00000601614 MYO5BQ9ULV0 1848 aa25.41■■□□□ 1.66
SSBP4-211ENST00000601614 NOS1P29475 1434 aa25.4■■□□□ 1.66
SSBP4-211ENST00000601614 DAPK1P53355 1430 aa25.4■■□□□ 1.66
SSBP4-211ENST00000601614 KANK1Q14678 1352 aa25.39■■□□□ 1.65
SSBP4-211ENST00000601614 CHD2O14647 1828 aaKnown RBP25.39■■□□□ 1.65
SSBP4-211ENST00000601614 COL16A1Q07092 1604 aaPredicted RBP25.37■■□□□ 1.65
SSBP4-211ENST00000601614 MSH6P52701 1360 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms