RNA–Protein interactions for RNA: ENST00000598278.5

SMIM7-216, Transcript of small integral membrane protein 7, humanhuman

TSL 3

Gene SMIM7, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM7-216ENST00000598278 UNC13BO14795 1591 aa17.05■□□□□ 0.32
SMIM7-216ENST00000598278 DEPDC5O75140 1603 aa17.04■□□□□ 0.32
SMIM7-216ENST00000598278 KANK1Q14678 1352 aa17.03■□□□□ 0.32
SMIM7-216ENST00000598278 ARID4BQ4LE39 1312 aaPredicted RBP17.03■□□□□ 0.32
SMIM7-216ENST00000598278 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.02■□□□□ 0.329e-6■■■□□ 18.9
SMIM7-216ENST00000598278 NUP155O75694 1391 aa17.02■□□□□ 0.31
SMIM7-216ENST00000598278 GGT6Q6P531 493 aa17.01■□□□□ 0.31
SMIM7-216ENST00000598278 SIGLEC1Q9BZZ2 1709 aa17.01■□□□□ 0.31
SMIM7-216ENST00000598278 PRDM15P57071 1507 aaPredicted RBP17.01■□□□□ 0.31
SMIM7-216ENST00000598278 KDM5DQ9BY66 1539 aa17.01■□□□□ 0.31
SMIM7-216ENST00000598278 PPP6R1Q9UPN7 881 aa17■□□□□ 0.31
SMIM7-216ENST00000598278 IQGAP3Q86VI3 1631 aa16.99■□□□□ 0.31
SMIM7-216ENST00000598278 MROH1Q8NDA8 1641 aa16.98■□□□□ 0.31
SMIM7-216ENST00000598278 FAM135AQ9P2D6 1515 aa16.97■□□□□ 0.31
SMIM7-216ENST00000598278 SLC4A1APQ9BWU0 796 aaKnown RBP16.96■□□□□ 0.31
SMIM7-216ENST00000598278 VWDEQ8N2E2 1590 aa16.96■□□□□ 0.31
SMIM7-216ENST00000598278 ZC3H13Q5T200 1668 aaKnown RBP16.96■□□□□ 0.31
SMIM7-216ENST00000598278 MLECQ14165 292 aa16.95■□□□□ 0.3
SMIM7-216ENST00000598278 ESF1Q9H501 851 aaKnown RBP16.95■□□□□ 0.3
SMIM7-216ENST00000598278 WASHC2CQ9Y4E1 1318 aa16.95■□□□□ 0.3
SMIM7-216ENST00000598278 CEP152O94986 1710 aa16.94■□□□□ 0.3
SMIM7-216ENST00000598278 MPHOSPH9Q99550 1183 aa16.94■□□□□ 0.3
SMIM7-216ENST00000598278 TET3O43151 1660 aa16.94■□□□□ 0.3
SMIM7-216ENST00000598278 PZPP20742 1482 aa16.93■□□□□ 0.3
SMIM7-216ENST00000598278 LMTK2Q8IWU2 1503 aa16.92■□□□□ 0.3
SMIM7-216ENST00000598278 ABCC3O15438 1527 aa16.91■□□□□ 0.3
SMIM7-216ENST00000598278 DHX57Q6P158 1386 aaKnown RBP16.91■□□□□ 0.3
SMIM7-216ENST00000598278 CNTLNQ9NXG0 1405 aa16.9■□□□□ 0.3
SMIM7-216ENST00000598278 FER1L4A9Z1Z3 1794 aa16.89■□□□□ 0.3
SMIM7-216ENST00000598278 CLTCQ00610 1675 aaKnown RBP16.89■□□□□ 0.29
SMIM7-216ENST00000598278 PKD2Q13563 968 aa16.89■□□□□ 0.29
SMIM7-216ENST00000598278 CCER1Q8TC90 406 aaPredicted RBP16.89■□□□□ 0.29
SMIM7-216ENST00000598278 CAMSAP1Q5T5Y3 1602 aa16.88■□□□□ 0.29
SMIM7-216ENST00000598278 EFCAB6Q5THR3 1501 aa16.87■□□□□ 0.29
SMIM7-216ENST00000598278 MROH2AA6NES4 1674 aa16.87■□□□□ 0.29
SMIM7-216ENST00000598278 E9PCH4 1651 aa16.87■□□□□ 0.29
SMIM7-216ENST00000598278 CFAP65Q6ZU64 1925 aaKnown RBP16.86■□□□□ 0.29
SMIM7-216ENST00000598278 RPRD2Q5VT52 1461 aaKnown RBP16.86■□□□□ 0.29
SMIM7-216ENST00000598278 ADAMTSL3P82987 1691 aa16.85■□□□□ 0.29
SMIM7-216ENST00000598278 CLSPNQ9HAW4 1339 aa16.85■□□□□ 0.29
SMIM7-216ENST00000598278 ARHGAP31Q2M1Z3 1444 aa16.85■□□□□ 0.29
SMIM7-216ENST00000598278 MADDQ8WXG6 1647 aa16.82■□□□□ 0.28
SMIM7-216ENST00000598278 NPATQ14207 1427 aa16.81■□□□□ 0.28
SMIM7-216ENST00000598278 ZMYM3Q14202 1370 aa16.81■□□□□ 0.28
SMIM7-216ENST00000598278 FOXD1Q16676 465 aa16.81■□□□□ 0.28
SMIM7-216ENST00000598278 SPHKAPQ2M3C7 1700 aa16.81■□□□□ 0.28
SMIM7-216ENST00000598278 RIMS1Q86UR5 1692 aaKnown RBP16.81■□□□□ 0.28
SMIM7-216ENST00000598278 ANKRD30BQ9BXX2 1392 aa16.79■□□□□ 0.28
SMIM7-216ENST00000598278 PREX1Q8TCU6 1659 aa16.78■□□□□ 0.28
SMIM7-216ENST00000598278 C3P01024 1663 aa16.78■□□□□ 0.28
SMIM7-216ENST00000598278 PTPRTO14522 1441 aa16.77■□□□□ 0.27
SMIM7-216ENST00000598278 TRPM2O94759 1503 aa16.75■□□□□ 0.27
SMIM7-216ENST00000598278 ERVK-7P63135 1459 aa16.75■□□□□ 0.27
SMIM7-216ENST00000598278 NOS1P29475 1434 aa16.75■□□□□ 0.27
SMIM7-216ENST00000598278 CCDC144AA2RUR9 1427 aa16.74■□□□□ 0.27
SMIM7-216ENST00000598278 SPATA31D1Q6ZQQ2 1576 aa16.73■□□□□ 0.27
SMIM7-216ENST00000598278 PLA2R1Q13018 1463 aa16.73■□□□□ 0.27
SMIM7-216ENST00000598278 SETD1BQ9UPS6 1966 aaKnown RBP16.72■□□□□ 0.27
SMIM7-216ENST00000598278 FBXO31Q5XUX0 539 aaPredicted RBP16.72■□□□□ 0.27
SMIM7-216ENST00000598278 KIF1BO60333 1816 aa16.71■□□□□ 0.27
SMIM7-216ENST00000598278 CEBPAP49715 358 aaPredicted RBP16.71■□□□□ 0.27
SMIM7-216ENST00000598278 SLC52A1Q9NWF4 448 aa16.71■□□□□ 0.27
SMIM7-216ENST00000598278 SYNMO15061 1565 aa16.7■□□□□ 0.26
SMIM7-216ENST00000598278 PTPRMP28827 1452 aa16.7■□□□□ 0.26
SMIM7-216ENST00000598278 TNRQ92752 1358 aa16.7■□□□□ 0.26
SMIM7-216ENST00000598278 NEUROD1Q13562 356 aa16.69■□□□□ 0.26
SMIM7-216ENST00000598278 PLPPR3Q6T4P5 718 aa16.69■□□□□ 0.26
SMIM7-216ENST00000598278 SIN3AQ96ST3 1273 aa16.69■□□□□ 0.26
SMIM7-216ENST00000598278 CLTCL1P53675 1640 aa16.69■□□□□ 0.26
SMIM7-216ENST00000598278 PIK3C2BO00750 1634 aa16.68■□□□□ 0.26
SMIM7-216ENST00000598278 KDM4FA0A1W2PPD8 638 aa16.67■□□□□ 0.26
SMIM7-216ENST00000598278 IDI1Q13907 227 aa16.65■□□□□ 0.26
SMIM7-216ENST00000598278 TIMELESSQ9UNS1 1208 aa16.65■□□□□ 0.26
SMIM7-216ENST00000598278 NLRP1Q9C000 1473 aa16.65■□□□□ 0.26
SMIM7-216ENST00000598278 UGGT1Q9NYU2 1555 aa16.64■□□□□ 0.25
SMIM7-216ENST00000598278 ZEB1P37275 1124 aaPredicted RBP16.64■□□□□ 0.25
SMIM7-216ENST00000598278 NEURL4Q96JN8 1562 aa16.64■□□□□ 0.25
SMIM7-216ENST00000598278 TONSLQ96HA7 1378 aa16.64■□□□□ 0.25
SMIM7-216ENST00000598278 STAG3Q9UJ98 1225 aa16.63■□□□□ 0.25
SMIM7-216ENST00000598278 CHGAP10645 457 aaKnown RBP16.62■□□□□ 0.25
SMIM7-216ENST00000598278 KDM5AP29375 1690 aaKnown RBP16.62■□□□□ 0.25
SMIM7-216ENST00000598278 MYO3AQ8NEV4 1616 aa16.6■□□□□ 0.25
SMIM7-216ENST00000598278 MYO5BQ9ULV0 1848 aa16.6■□□□□ 0.25
SMIM7-216ENST00000598278 ADGRB3O60242 1522 aa16.6■□□□□ 0.25
SMIM7-216ENST00000598278 SPATA31E1Q6ZUB1 1445 aa16.59■□□□□ 0.25
SMIM7-216ENST00000598278 TMEM131LA2VDJ0 1609 aa16.59■□□□□ 0.25
SMIM7-216ENST00000598278 RGL3Q3MIN7 710 aa16.58■□□□□ 0.24
SMIM7-216ENST00000598278 ZNF326Q5BKZ1 582 aaKnown RBP16.58■□□□□ 0.24
SMIM7-216ENST00000598278 A2ML1A8K2U0 1454 aa16.58■□□□□ 0.24
SMIM7-216ENST00000598278 UBR1Q8IWV7 1749 aa16.57■□□□□ 0.24
SMIM7-216ENST00000598278 ZNF142P52746 1687 aaPredicted RBP16.57■□□□□ 0.24
SMIM7-216ENST00000598278 UHRF1BP1Q6BDS2 1440 aa16.57■□□□□ 0.24
SMIM7-216ENST00000598278 RPGRIP1LQ68CZ1 1315 aa16.57■□□□□ 0.24
SMIM7-216ENST00000598278 STAC3Q96MF2 364 aa16.57■□□□□ 0.24
SMIM7-216ENST00000598278 CEP170BQ9Y4F5 1589 aaPredicted RBP16.55■□□□□ 0.24
SMIM7-216ENST00000598278 L3MBTL2Q969R5 705 aa16.55■□□□□ 0.24
SMIM7-216ENST00000598278 HDGFP51858 240 aaKnown RBP16.54■□□□□ 0.24
SMIM7-216ENST00000598278 THEMISQ8N1K5 641 aaPredicted RBP16.54■□□□□ 0.24
SMIM7-216ENST00000598278 DCAF11Q8TEB1 546 aa16.53■□□□□ 0.24
SMIM7-216ENST00000598278 PPLO60437 1756 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms