RNA–Protein interactions for RNA: ENST00000597180.1

IRF3-216, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-216ENST00000597180 FAM135AQ9P2D6 1515 aa27.72■■■□□ 2.03
IRF3-216ENST00000597180 PPP6R1Q9UPN7 881 aa27.72■■■□□ 2.03
IRF3-216ENST00000597180 RRP7BPQ9NSQ0 103 aa27.71■■■□□ 2.03
IRF3-216ENST00000597180 GGT6Q6P531 493 aa27.7■■■□□ 2.02
IRF3-216ENST00000597180 ESF1Q9H501 851 aaKnown RBP27.69■■■□□ 2.02
IRF3-216ENST00000597180 MROH1Q8NDA8 1641 aa27.68■■■□□ 2.02
IRF3-216ENST00000597180 ROCK1Q13464 1354 aa27.67■■■□□ 2.02
IRF3-216ENST00000597180 DEPDC5O75140 1603 aa27.66■■■□□ 2.02
IRF3-216ENST00000597180 KDM5DQ9BY66 1539 aa27.65■■■□□ 2.02
IRF3-216ENST00000597180 ZC3H13Q5T200 1668 aaKnown RBP27.64■■■□□ 2.02
IRF3-216ENST00000597180 SETD1BQ9UPS6 1966 aaKnown RBP27.64■■■□□ 2.01
IRF3-216ENST00000597180 PRDM15P57071 1507 aaPredicted RBP27.62■■■□□ 2.01
IRF3-216ENST00000597180 CEBPAP49715 358 aaPredicted RBP27.61■■■□□ 2.01
IRF3-216ENST00000597180 ZMYM3Q14202 1370 aa27.6■■■□□ 2.01
IRF3-216ENST00000597180 ITGAEP38570 1179 aa27.59■■■□□ 2.01
IRF3-216ENST00000597180 PLPPR3Q6T4P5 718 aa27.59■■■□□ 2.01
IRF3-216ENST00000597180 CEP152O94986 1710 aa27.58■■■□□ 2.01
IRF3-216ENST00000597180 PREX1Q8TCU6 1659 aa27.58■■■□□ 2.01
IRF3-216ENST00000597180 ANKRD50Q9ULJ7 1429 aa27.58■■■□□ 2
IRF3-216ENST00000597180 ABCC3O15438 1527 aa27.57■■■□□ 2
IRF3-216ENST00000597180 WASHC2CQ9Y4E1 1318 aa27.55■■■□□ 2
IRF3-216ENST00000597180 NPATQ14207 1427 aa27.54■■■□□ 2
IRF3-216ENST00000597180 CAMSAP1Q5T5Y3 1602 aa27.52■■■□□ 2
IRF3-216ENST00000597180 VWDEQ8N2E2 1590 aa27.52■■■□□ 2
IRF3-216ENST00000597180 LMTK3Q96Q04 1460 aa27.52■■■□□ 2
IRF3-216ENST00000597180 GCC2Q8IWJ2 1684 aa27.51■■□□□ 1.99
IRF3-216ENST00000597180 PZPP20742 1482 aa27.51■■□□□ 1.99
IRF3-216ENST00000597180 UNC13BO14795 1591 aa27.5■■□□□ 1.99
IRF3-216ENST00000597180 KANK1Q14678 1352 aa27.46■■□□□ 1.99
IRF3-216ENST00000597180 LMTK2Q8IWU2 1503 aa27.46■■□□□ 1.99
IRF3-216ENST00000597180 UHRF1BP1Q6BDS2 1440 aa27.43■■□□□ 1.98
IRF3-216ENST00000597180 MYO3AQ8NEV4 1616 aa27.43■■□□□ 1.98
IRF3-216ENST00000597180 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.43■■□□□ 1.985e-6■■■□□ 18.6
IRF3-216ENST00000597180 NAIPQ13075 1403 aa27.42■■□□□ 1.98
IRF3-216ENST00000597180 CFAP65Q6ZU64 1925 aaKnown RBP27.41■■□□□ 1.98
IRF3-216ENST00000597180 ZNF142P52746 1687 aaPredicted RBP27.41■■□□□ 1.98
IRF3-216ENST00000597180 HFM1A2PYH4 1435 aa27.41■■□□□ 1.98
IRF3-216ENST00000597180 ARHGAP31Q2M1Z3 1444 aa27.41■■□□□ 1.98
IRF3-216ENST00000597180 SPATA31D1Q6ZQQ2 1576 aa27.39■■□□□ 1.98
IRF3-216ENST00000597180 IQGAP3Q86VI3 1631 aa27.38■■□□□ 1.97
IRF3-216ENST00000597180 TET3O43151 1660 aa27.38■■□□□ 1.97
IRF3-216ENST00000597180 EFCAB6Q5THR3 1501 aa27.37■■□□□ 1.97
IRF3-216ENST00000597180 FBXO31Q5XUX0 539 aaPredicted RBP27.37■■□□□ 1.97
IRF3-216ENST00000597180 ERVK-7P63135 1459 aa27.36■■□□□ 1.97
IRF3-216ENST00000597180 CEP170BQ9Y4F5 1589 aaPredicted RBP27.35■■□□□ 1.97
IRF3-216ENST00000597180 TNRQ92752 1358 aa27.35■■□□□ 1.97
IRF3-216ENST00000597180 HSPA2P54652 639 aa27.3■■□□□ 1.96
IRF3-216ENST00000597180 A2ML1A8K2U0 1454 aa27.29■■□□□ 1.96
IRF3-216ENST00000597180 RPRD2Q5VT52 1461 aaKnown RBP27.29■■□□□ 1.96
IRF3-216ENST00000597180 NLRP1Q9C000 1473 aa27.28■■□□□ 1.96
IRF3-216ENST00000597180 E9PCH4 1651 aa27.27■■□□□ 1.96
IRF3-216ENST00000597180 NUP155O75694 1391 aa27.27■■□□□ 1.96
IRF3-216ENST00000597180 STRCQ7RTU9 1775 aa27.25■■□□□ 1.95
IRF3-216ENST00000597180 NOS1P29475 1434 aa27.23■■□□□ 1.95
IRF3-216ENST00000597180 SYNMO15061 1565 aa27.22■■□□□ 1.95
IRF3-216ENST00000597180 UBR1Q8IWV7 1749 aa27.18■■□□□ 1.94
IRF3-216ENST00000597180 PLA2R1Q13018 1463 aa27.18■■□□□ 1.94
IRF3-216ENST00000597180 UGGT1Q9NYU2 1555 aa27.18■■□□□ 1.94
IRF3-216ENST00000597180 PIK3C2BO00750 1634 aa27.16■■□□□ 1.94
IRF3-216ENST00000597180 SETD5Q9C0A6 1442 aa27.16■■□□□ 1.94
IRF3-216ENST00000597180 KDM5AP29375 1690 aaKnown RBP27.15■■□□□ 1.94
IRF3-216ENST00000597180 SPHKAPQ2M3C7 1700 aa27.13■■□□□ 1.93
IRF3-216ENST00000597180 POLR1AO95602 1720 aaPredicted RBP27.12■■□□□ 1.93
IRF3-216ENST00000597180 TRIM52Q96A61 297 aa27.09■■□□□ 1.93
IRF3-216ENST00000597180 THEMISQ8N1K5 641 aaPredicted RBP27.08■■□□□ 1.93
IRF3-216ENST00000597180 ACIN1Q9UKV3 1341 aaKnown RBP27.08■■□□□ 1.93
IRF3-216ENST00000597180 SLC52A1Q9NWF4 448 aa27.07■■□□□ 1.92
IRF3-216ENST00000597180 IDI1Q13907 227 aa27.06■■□□□ 1.92
IRF3-216ENST00000597180 RAB3GAP2Q9H2M9 1393 aa27.06■■□□□ 1.92
IRF3-216ENST00000597180 ADGRB3O60242 1522 aa27.06■■□□□ 1.92
IRF3-216ENST00000597180 PTPRTO14522 1441 aa27.05■■□□□ 1.92
IRF3-216ENST00000597180 MYO5BQ9ULV0 1848 aa27.04■■□□□ 1.92
IRF3-216ENST00000597180 PKD2Q13563 968 aa27.04■■□□□ 1.92
IRF3-216ENST00000597180 DMRT2Q9Y5R5 561 aa27.03■■□□□ 1.92
IRF3-216ENST00000597180 NEURL4Q96JN8 1562 aa27.02■■□□□ 1.92
IRF3-216ENST00000597180 SLIT1O75093 1534 aa27.02■■□□□ 1.92
IRF3-216ENST00000597180 ARHGAP23Q9P227 1491 aa27.01■■□□□ 1.91
IRF3-216ENST00000597180 SLC4A1APQ9BWU0 796 aaKnown RBP27.01■■□□□ 1.91
IRF3-216ENST00000597180 TMEM131LA2VDJ0 1609 aa27.01■■□□□ 1.91
IRF3-216ENST00000597180 NCKAP5LQ9HCH0 1330 aa27■■□□□ 1.91
IRF3-216ENST00000597180 TRPM2O94759 1503 aa27■■□□□ 1.91
IRF3-216ENST00000597180 HRCP23327 699 aa26.96■■□□□ 1.91
IRF3-216ENST00000597180 ANKLE2Q86XL3 938 aa26.96■■□□□ 1.91
IRF3-216ENST00000597180 CLTCL1P53675 1640 aa26.96■■□□□ 1.91
IRF3-216ENST00000597180 MED14O60244 1454 aa26.95■■□□□ 1.91
IRF3-216ENST00000597180 STAG3Q9UJ98 1225 aa26.95■■□□□ 1.9
IRF3-216ENST00000597180 MPHOSPH9Q99550 1183 aa26.94■■□□□ 1.9
IRF3-216ENST00000597180 TMEM2Q9UHN6 1383 aa26.94■■□□□ 1.9
IRF3-216ENST00000597180 SCAF11Q99590 1463 aaKnown RBP26.93■■□□□ 1.9
IRF3-216ENST00000597180 IQGAP1P46940 1657 aa26.92■■□□□ 1.9
IRF3-216ENST00000597180 KIF1BO60333 1816 aa26.92■■□□□ 1.9
IRF3-216ENST00000597180 NPHP4O75161 1426 aaPredicted RBP26.89■■□□□ 1.89
IRF3-216ENST00000597180 LTKP29376 864 aa26.87■■□□□ 1.89
IRF3-216ENST00000597180 ZFYVE9O95405 1425 aa26.87■■□□□ 1.89
IRF3-216ENST00000597180 FOXD1Q16676 465 aa26.85■■□□□ 1.89
IRF3-216ENST00000597180 TXNDC2Q86VQ3 553 aa26.85■■□□□ 1.89
IRF3-216ENST00000597180 EID1Q9Y6B2 187 aa26.85■■□□□ 1.89
IRF3-216ENST00000597180 TRIM26Q12899 539 aaPredicted RBP26.83■■□□□ 1.89
IRF3-216ENST00000597180 RIMS2Q9UQ26 1411 aa26.82■■□□□ 1.88
IRF3-216ENST00000597180 CHGAP10645 457 aaKnown RBP26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms