RNA–Protein interactions for RNA: ENST00000596655.1

C19orf48-207, Transcript of chromosome 19 open reading frame 48, humanhuman

TSL 2

Gene C19orf48, Length 1,639 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-207ENST00000596655 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.69■■■□□ 2.18
C19orf48-207ENST00000596655 HSPA2P54652 639 aa28.68■■■□□ 2.18
C19orf48-207ENST00000596655 ZMYM3Q14202 1370 aa28.67■■■□□ 2.18
C19orf48-207ENST00000596655 PPP6R1Q9UPN7 881 aa28.66■■■□□ 2.18
C19orf48-207ENST00000596655 EIF2AK4Q9P2K8 1649 aaKnown RBP28.66■■■□□ 2.18
C19orf48-207ENST00000596655 UHRF1BP1Q6BDS2 1440 aa28.64■■■□□ 2.18
C19orf48-207ENST00000596655 RNF17Q9BXT8 1623 aaKnown RBP28.64■■■□□ 2.18
C19orf48-207ENST00000596655 DUOX2Q9NRD8 1548 aa28.63■■■□□ 2.17
C19orf48-207ENST00000596655 KDM5DQ9BY66 1539 aa28.62■■■□□ 2.17
C19orf48-207ENST00000596655 FAM135AQ9P2D6 1515 aa28.62■■■□□ 2.17
C19orf48-207ENST00000596655 NPATQ14207 1427 aa28.61■■■□□ 2.17
C19orf48-207ENST00000596655 KIF15Q9NS87 1388 aa28.6■■■□□ 2.17
C19orf48-207ENST00000596655 CLSPNQ9HAW4 1339 aa28.59■■■□□ 2.17
C19orf48-207ENST00000596655 FAM50AQ14320 339 aaKnown RBP28.59■■■□□ 2.17
C19orf48-207ENST00000596655 PTPRKQ15262 1439 aa28.57■■■□□ 2.16
C19orf48-207ENST00000596655 MROH1Q8NDA8 1641 aa28.56■■■□□ 2.16
C19orf48-207ENST00000596655 RRP7BPQ9NSQ0 103 aa28.55■■■□□ 2.16
C19orf48-207ENST00000596655 CHIC2Q9UKJ5 165 aa28.54■■■□□ 2.16
C19orf48-207ENST00000596655 ZC3H13Q5T200 1668 aaKnown RBP28.54■■■□□ 2.16
C19orf48-207ENST00000596655 MYO3AQ8NEV4 1616 aa28.53■■■□□ 2.16
C19orf48-207ENST00000596655 WASHC2CQ9Y4E1 1318 aa28.53■■■□□ 2.16
C19orf48-207ENST00000596655 ERBINQ96RT1 1412 aa28.53■■■□□ 2.16
C19orf48-207ENST00000596655 ANKRD30AQ9BXX3 1397 aa28.52■■■□□ 2.16
C19orf48-207ENST00000596655 DHX57Q6P158 1386 aaKnown RBP28.51■■■□□ 2.15
C19orf48-207ENST00000596655 ABCC3O15438 1527 aa28.5■■■□□ 2.15
C19orf48-207ENST00000596655 ADGRL2O95490 1459 aa28.5■■■□□ 2.15
C19orf48-207ENST00000596655 CEP152O94986 1710 aa28.5■■■□□ 2.15
C19orf48-207ENST00000596655 NCOA1Q15788 1441 aa28.5■■■□□ 2.15
C19orf48-207ENST00000596655 ZNF142P52746 1687 aaPredicted RBP28.49■■■□□ 2.15
C19orf48-207ENST00000596655 PZPP20742 1482 aa28.49■■■□□ 2.15
C19orf48-207ENST00000596655 STRCQ7RTU9 1775 aa28.49■■■□□ 2.15
C19orf48-207ENST00000596655 PRDM15P57071 1507 aaPredicted RBP28.46■■■□□ 2.15
C19orf48-207ENST00000596655 DEPDC5O75140 1603 aa28.46■■■□□ 2.15
C19orf48-207ENST00000596655 CEP170BQ9Y4F5 1589 aaPredicted RBP28.45■■■□□ 2.14
C19orf48-207ENST00000596655 CAMSAP1Q5T5Y3 1602 aa28.44■■■□□ 2.14
C19orf48-207ENST00000596655 FBXO31Q5XUX0 539 aaPredicted RBP28.43■■■□□ 2.14
C19orf48-207ENST00000596655 SETD5Q9C0A6 1442 aa28.4■■■□□ 2.14
C19orf48-207ENST00000596655 TNRQ92752 1358 aa28.39■■■□□ 2.14
C19orf48-207ENST00000596655 CFAP65Q6ZU64 1925 aaKnown RBP28.38■■■□□ 2.13
C19orf48-207ENST00000596655 RAB3GAP2Q9H2M9 1393 aa28.37■■■□□ 2.13
C19orf48-207ENST00000596655 A2ML1A8K2U0 1454 aa28.36■■■□□ 2.13
C19orf48-207ENST00000596655 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.35■■■□□ 2.13not detected■□□□□ 9.6
C19orf48-207ENST00000596655 SPATA31D1Q6ZQQ2 1576 aa28.33■■■□□ 2.13
C19orf48-207ENST00000596655 ANKRD50Q9ULJ7 1429 aa28.33■■■□□ 2.13
C19orf48-207ENST00000596655 KANK1Q14678 1352 aa28.32■■■□□ 2.12
C19orf48-207ENST00000596655 ERVK-7P63135 1459 aa28.32■■■□□ 2.12
C19orf48-207ENST00000596655 VWDEQ8N2E2 1590 aa28.32■■■□□ 2.12
C19orf48-207ENST00000596655 ITGAEP38570 1179 aa28.31■■■□□ 2.12
C19orf48-207ENST00000596655 ROCK1Q13464 1354 aa28.3■■■□□ 2.12
C19orf48-207ENST00000596655 DMRT2Q9Y5R5 561 aa28.29■■■□□ 2.12
C19orf48-207ENST00000596655 PLA2R1Q13018 1463 aa28.29■■■□□ 2.12
C19orf48-207ENST00000596655 NLRP1Q9C000 1473 aa28.28■■■□□ 2.12
C19orf48-207ENST00000596655 ARHGAP31Q2M1Z3 1444 aa28.28■■■□□ 2.12
C19orf48-207ENST00000596655 LMTK2Q8IWU2 1503 aa28.27■■■□□ 2.12
C19orf48-207ENST00000596655 PTPRTO14522 1441 aa28.26■■■□□ 2.11
C19orf48-207ENST00000596655 HFM1A2PYH4 1435 aa28.23■■■□□ 2.11
C19orf48-207ENST00000596655 UNC13BO14795 1591 aa28.23■■■□□ 2.11
C19orf48-207ENST00000596655 UGGT1Q9NYU2 1555 aa28.22■■■□□ 2.11
C19orf48-207ENST00000596655 NCKAP5LQ9HCH0 1330 aa28.21■■■□□ 2.11
C19orf48-207ENST00000596655 EFCAB6Q5THR3 1501 aa28.21■■■□□ 2.11
C19orf48-207ENST00000596655 POLR1AO95602 1720 aaPredicted RBP28.21■■■□□ 2.11
C19orf48-207ENST00000596655 PKD2Q13563 968 aa28.18■■■□□ 2.1
C19orf48-207ENST00000596655 TET3O43151 1660 aa28.17■■■□□ 2.1
C19orf48-207ENST00000596655 UBR1Q8IWV7 1749 aa28.16■■■□□ 2.1
C19orf48-207ENST00000596655 ILDR1Q86SU0 546 aaPredicted RBP28.16■■■□□ 2.1
C19orf48-207ENST00000596655 GCC2Q8IWJ2 1684 aa28.14■■■□□ 2.1
C19orf48-207ENST00000596655 THEMISQ8N1K5 641 aaPredicted RBP28.14■■■□□ 2.09
C19orf48-207ENST00000596655 NEURL4Q96JN8 1562 aa28.13■■■□□ 2.09
C19orf48-207ENST00000596655 IQGAP3Q86VI3 1631 aa28.12■■■□□ 2.09
C19orf48-207ENST00000596655 SYNMO15061 1565 aa28.11■■■□□ 2.09
C19orf48-207ENST00000596655 NAIPQ13075 1403 aa28.11■■■□□ 2.09
C19orf48-207ENST00000596655 PIK3C2BO00750 1634 aa28.1■■■□□ 2.09
C19orf48-207ENST00000596655 RPRD2Q5VT52 1461 aaKnown RBP28.09■■■□□ 2.09
C19orf48-207ENST00000596655 NOS1P29475 1434 aa28.07■■■□□ 2.08
C19orf48-207ENST00000596655 CERKQ8TCT0 537 aa28.07■■■□□ 2.08
C19orf48-207ENST00000596655 ZNF316A6NFI3 1004 aaPredicted RBP28.07■■■□□ 2.08
C19orf48-207ENST00000596655 LTBP4Q8N2S1 1624 aa28.06■■■□□ 2.08
C19orf48-207ENST00000596655 E9PCH4 1651 aa28.06■■■□□ 2.08
C19orf48-207ENST00000596655 ANKLE2Q86XL3 938 aa28.05■■■□□ 2.08
C19orf48-207ENST00000596655 FBXO41Q8TF61 875 aa28.03■■■□□ 2.08
C19orf48-207ENST00000596655 NUP155O75694 1391 aa28.03■■■□□ 2.08
C19orf48-207ENST00000596655 KDM5AP29375 1690 aaKnown RBP28.03■■■□□ 2.08
C19orf48-207ENST00000596655 IQGAP1P46940 1657 aa28■■■□□ 2.07
C19orf48-207ENST00000596655 MED14O60244 1454 aa28■■■□□ 2.07
C19orf48-207ENST00000596655 IDI1Q13907 227 aa28■■■□□ 2.07
C19orf48-207ENST00000596655 SLIT1O75093 1534 aa27.99■■■□□ 2.07
C19orf48-207ENST00000596655 ZNF335Q9H4Z2 1342 aaPredicted RBP27.99■■■□□ 2.07
C19orf48-207ENST00000596655 ARHGAP23Q9P227 1491 aa27.98■■■□□ 2.07
C19orf48-207ENST00000596655 NPHP4O75161 1426 aaPredicted RBP27.98■■■□□ 2.07
C19orf48-207ENST00000596655 ADGRB3O60242 1522 aa27.96■■■□□ 2.07
C19orf48-207ENST00000596655 STAG3Q9UJ98 1225 aa27.96■■■□□ 2.07
C19orf48-207ENST00000596655 SCAF11Q99590 1463 aaKnown RBP27.95■■■□□ 2.06
C19orf48-207ENST00000596655 MYO5BQ9ULV0 1848 aa27.95■■■□□ 2.06
C19orf48-207ENST00000596655 SLC52A1Q9NWF4 448 aa27.94■■■□□ 2.06
C19orf48-207ENST00000596655 TIMELESSQ9UNS1 1208 aa27.92■■■□□ 2.06
C19orf48-207ENST00000596655 TMEM2Q9UHN6 1383 aa27.91■■■□□ 2.06
C19orf48-207ENST00000596655 DIEXFQ68CQ4 756 aaKnown RBP27.9■■■□□ 2.06
C19orf48-207ENST00000596655 ACIN1Q9UKV3 1341 aaKnown RBP27.9■■■□□ 2.06
C19orf48-207ENST00000596655 LTKP29376 864 aa27.89■■■□□ 2.06
C19orf48-207ENST00000596655 TXNDC2Q86VQ3 553 aa27.89■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms