RNA–Protein interactions for RNA: ENST00000594814.5

LRIT3-202, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRIT3, Length 3,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-202ENST00000594814 IQSEC2Q5JU85 1478 aa5.87□□□□□ -1.47
LRIT3-202ENST00000594814 SALL2Q9Y467 1007 aaPredicted RBP5.87□□□□□ -1.47
LRIT3-202ENST00000594814 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.87□□□□□ -1.47
LRIT3-202ENST00000594814 MTUS2Q5JR59 1369 aa5.87□□□□□ -1.47
LRIT3-202ENST00000594814 CCDC125Q86Z20 511 aa5.87□□□□□ -1.47
LRIT3-202ENST00000594814 IPO9Q96P70 1041 aaKnown RBP5.87□□□□□ -1.47
LRIT3-202ENST00000594814 TRAIPQ9BWF2 469 aa5.87□□□□□ -1.47
LRIT3-202ENST00000594814 HECW1Q76N89 1606 aa5.87□□□□□ -1.47
LRIT3-202ENST00000594814 CCNB3Q8WWL7 1395 aa5.86□□□□□ -1.47
LRIT3-202ENST00000594814 RBM10P98175 930 aaKnown RBP5.86□□□□□ -1.47
LRIT3-202ENST00000594814 FAM50AQ14320 339 aaKnown RBP5.86□□□□□ -1.47
LRIT3-202ENST00000594814 CHIC2Q9UKJ5 165 aa5.86□□□□□ -1.47
LRIT3-202ENST00000594814 ABCC10Q5T3U5 1492 aa5.85□□□□□ -1.47
LRIT3-202ENST00000594814 PAXIP1Q6ZW49 1069 aaPredicted RBP5.85□□□□□ -1.47
LRIT3-202ENST00000594814 FAM177A1Q8N128 213 aaPredicted RBP5.85□□□□□ -1.47
LRIT3-202ENST00000594814 PROM2Q8N271 834 aa5.85□□□□□ -1.47
LRIT3-202ENST00000594814 ZCCHC11Q5TAX3 1644 aaKnown RBP5.85□□□□□ -1.47
LRIT3-202ENST00000594814 GPATCH8Q9UKJ3 1502 aaKnown RBP5.85□□□□□ -1.47
LRIT3-202ENST00000594814 FGD6Q6ZV73 1430 aa5.85□□□□□ -1.47
LRIT3-202ENST00000594814 ZMYND15Q9H091 742 aa5.85□□□□□ -1.47
LRIT3-202ENST00000594814 CENPJQ9HC77 1338 aaPredicted RBP5.85□□□□□ -1.47
LRIT3-202ENST00000594814 TTC37Q6PGP7 1564 aa5.85□□□□□ -1.47
LRIT3-202ENST00000594814 RRP9O43818 475 aaKnown RBP5.85□□□□□ -1.47
LRIT3-202ENST00000594814 HMGB1P09429 215 aaKnown RBP5.85□□□□□ -1.47
LRIT3-202ENST00000594814 SGSM3Q96HU1 749 aa5.85□□□□□ -1.47
LRIT3-202ENST00000594814 SENP3Q9H4L4 574 aaPredicted RBP5.85□□□□□ -1.47
LRIT3-202ENST00000594814 DIP2BQ9P265 1576 aa5.84□□□□□ -1.47
LRIT3-202ENST00000594814 KDM5BQ9UGL1 1544 aa5.84□□□□□ -1.47
LRIT3-202ENST00000594814 MAFGO15525 162 aa5.84□□□□□ -1.47
LRIT3-202ENST00000594814 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.84□□□□□ -1.48
LRIT3-202ENST00000594814 ARHGEF12Q9NZN5 1544 aa5.84□□□□□ -1.48
LRIT3-202ENST00000594814 TROQ12816 1431 aaPredicted RBP5.83□□□□□ -1.48
LRIT3-202ENST00000594814 MYOM3Q5VTT5 1437 aa5.83□□□□□ -1.48
LRIT3-202ENST00000594814 ZNF777Q9ULD5 760 aaPredicted RBP5.83□□□□□ -1.48
LRIT3-202ENST00000594814 CCDC18Q5T9S5 1454 aa5.83□□□□□ -1.48
LRIT3-202ENST00000594814 HNRNPMP52272 730 aaKnown RBP eCLIP5.83□□□□□ -1.48
LRIT3-202ENST00000594814 DDRGK1Q96HY6 314 aa5.83□□□□□ -1.48
LRIT3-202ENST00000594814 ZBTB47Q9UFB7 747 aaPredicted RBP5.82□□□□□ -1.48
LRIT3-202ENST00000594814 EHBP1L1Q8N3D4 1523 aa5.82□□□□□ -1.48
LRIT3-202ENST00000594814 ANP32CO43423 234 aa5.82□□□□□ -1.48
LRIT3-202ENST00000594814 MMP14P50281 582 aa5.82□□□□□ -1.48
LRIT3-202ENST00000594814 RRP7BPQ9NSQ0 103 aa5.82□□□□□ -1.48
LRIT3-202ENST00000594814 DENND4BO75064 1496 aaPredicted RBP5.82□□□□□ -1.48
LRIT3-202ENST00000594814 ARID4BQ4LE39 1312 aaPredicted RBP5.82□□□□□ -1.48
LRIT3-202ENST00000594814 SUPT6HQ7KZ85 1726 aaKnown RBP5.82□□□□□ -1.48
LRIT3-202ENST00000594814 PTPN23Q9H3S7 1636 aa5.81□□□□□ -1.48
LRIT3-202ENST00000594814 PLEKHD1A6NEE1 506 aa5.81□□□□□ -1.48
LRIT3-202ENST00000594814 IRX6P78412 446 aaPredicted RBP5.81□□□□□ -1.48
LRIT3-202ENST00000594814 CDC42BPAQ5VT25 1732 aa5.81□□□□□ -1.48
LRIT3-202ENST00000594814 UHRF1BP1LA0JNW5 1464 aa5.81□□□□□ -1.48
LRIT3-202ENST00000594814 ABCC5O15440 1437 aa5.81□□□□□ -1.48
LRIT3-202ENST00000594814 ASXL2Q76L83 1435 aa5.81□□□□□ -1.48
LRIT3-202ENST00000594814 CDC42BPBQ9Y5S2 1711 aa5.81□□□□□ -1.48
LRIT3-202ENST00000594814 MS4A1P11836 297 aa5.81□□□□□ -1.48
LRIT3-202ENST00000594814 FOXD1Q16676 465 aa5.81□□□□□ -1.48
LRIT3-202ENST00000594814 CFAP44Q96MT7 982 aa5.81□□□□□ -1.48
LRIT3-202ENST00000594814 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.81□□□□□ -1.48
LRIT3-202ENST00000594814 MAP3K4Q9Y6R4 1608 aa5.81□□□□□ -1.48
LRIT3-202ENST00000594814 PPP1R15AO75807 674 aaPredicted RBP5.81□□□□□ -1.48
LRIT3-202ENST00000594814 CCDC144AA2RUR9 1427 aa5.8□□□□□ -1.48
LRIT3-202ENST00000594814 RAB3GAP2Q9H2M9 1393 aa5.8□□□□□ -1.48
LRIT3-202ENST00000594814 MAMSTRQ6ZN01 415 aa5.8□□□□□ -1.48
LRIT3-202ENST00000594814 MBD5Q9P267 1494 aa5.8□□□□□ -1.48
LRIT3-202ENST00000594814 TCOF1Q13428 1488 aaKnown RBP5.79□□□□□ -1.48
LRIT3-202ENST00000594814 ONECUT3O60422 494 aaPredicted RBP5.79□□□□□ -1.48
LRIT3-202ENST00000594814 CFDP1Q9UEE9 299 aaPredicted RBP5.79□□□□□ -1.48
LRIT3-202ENST00000594814 SAMD9LQ8IVG5 1584 aa5.79□□□□□ -1.48
LRIT3-202ENST00000594814 FAM43BQ6ZT52 329 aaPredicted RBP5.79□□□□□ -1.48
LRIT3-202ENST00000594814 AFAP1Q8N556 730 aa5.79□□□□□ -1.48
LRIT3-202ENST00000594814 CAMSAP2Q08AD1 1489 aa5.79□□□□□ -1.48
LRIT3-202ENST00000594814 NCLP19338 710 aaKnown RBP5.78□□□□□ -1.48
LRIT3-202ENST00000594814 ZNF592Q92610 1267 aa5.78□□□□□ -1.48
LRIT3-202ENST00000594814 MTMR7Q9Y216 660 aa5.78□□□□□ -1.48
LRIT3-202ENST00000594814 RNF123Q5XPI4 1314 aa5.78□□□□□ -1.48
LRIT3-202ENST00000594814 NAIPQ13075 1403 aa5.78□□□□□ -1.48
LRIT3-202ENST00000594814 SECISBP2LQ93073 1101 aaKnown RBP5.78□□□□□ -1.48
LRIT3-202ENST00000594814 ADAMTSL3P82987 1691 aa5.77□□□□□ -1.49
LRIT3-202ENST00000594814 DAPK1P53355 1430 aa5.77□□□□□ -1.49
LRIT3-202ENST00000594814 TRAPPC8Q9Y2L5 1435 aa5.77□□□□□ -1.49
LRIT3-202ENST00000594814 ZNF326Q5BKZ1 582 aaKnown RBP5.77□□□□□ -1.49
LRIT3-202ENST00000594814 NME8Q8N427 588 aa5.77□□□□□ -1.49
LRIT3-202ENST00000594814 SIN3AQ96ST3 1273 aa5.77□□□□□ -1.49
LRIT3-202ENST00000594814 RPS6KL1Q9Y6S9 549 aa5.77□□□□□ -1.49
LRIT3-202ENST00000594814 WDR7Q9Y4E6 1490 aa5.77□□□□□ -1.49
LRIT3-202ENST00000594814 TCERG1O14776 1098 aaKnown RBP5.77□□□□□ -1.49
LRIT3-202ENST00000594814 GTF2E1P29083 439 aaPredicted RBP5.77□□□□□ -1.49
LRIT3-202ENST00000594814 GSE1Q14687 1217 aa5.77□□□□□ -1.49
LRIT3-202ENST00000594814 SMG6Q86US8 1419 aaKnown RBP5.77□□□□□ -1.49
LRIT3-202ENST00000594814 ZBED9Q6R2W3 1325 aa5.77□□□□□ -1.49
LRIT3-202ENST00000594814 HECW2Q9P2P5 1572 aa5.76□□□□□ -1.49
LRIT3-202ENST00000594814 POLR1AO95602 1720 aaPredicted RBP5.76□□□□□ -1.49
LRIT3-202ENST00000594814 L1TD1Q5T7N2 865 aaKnown RBP5.76□□□□□ -1.49
LRIT3-202ENST00000594814 PRDM4Q9UKN5 801 aa5.76□□□□□ -1.49
LRIT3-202ENST00000594814 SYCP2Q9BX26 1530 aa5.75□□□□□ -1.49
LRIT3-202ENST00000594814 RAPGEF3O95398 923 aa5.75□□□□□ -1.49
LRIT3-202ENST00000594814 MAP7D2Q96T17 732 aa5.75□□□□□ -1.49
LRIT3-202ENST00000594814 ISY1Q9ULR0 285 aaKnown RBP5.75□□□□□ -1.49
LRIT3-202ENST00000594814 PLCH2O75038 1416 aa5.75□□□□□ -1.49
LRIT3-202ENST00000594814 MIA2Q96PC5 1412 aa5.75□□□□□ -1.49
LRIT3-202ENST00000594814 COL17A1Q9UMD9 1497 aaPredicted RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms