RNA–Protein interactions for RNA: ENST00000594081.1

SMG9-202, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-202ENST00000594081 TIAM1Q13009 1591 aa13.97□□□□□ -0.17
SMG9-202ENST00000594081 VWDEQ8N2E2 1590 aa13.97□□□□□ -0.17
SMG9-202ENST00000594081 KDM5DQ9BY66 1539 aa13.97□□□□□ -0.17
SMG9-202ENST00000594081 CCNB3Q8WWL7 1395 aa13.96□□□□□ -0.18
SMG9-202ENST00000594081 FAM135AQ9P2D6 1515 aa13.95□□□□□ -0.18
SMG9-202ENST00000594081 PZPP20742 1482 aa13.95□□□□□ -0.18
SMG9-202ENST00000594081 CFDP1Q9UEE9 299 aaPredicted RBP13.95□□□□□ -0.18
SMG9-202ENST00000594081 TOM1O60784 492 aa13.94□□□□□ -0.18
SMG9-202ENST00000594081 TNRQ92752 1358 aa13.94□□□□□ -0.18
SMG9-202ENST00000594081 DEPDC5O75140 1603 aa13.93□□□□□ -0.18
SMG9-202ENST00000594081 IQGAP1P46940 1657 aa13.93□□□□□ -0.18
SMG9-202ENST00000594081 RNF17Q9BXT8 1623 aaKnown RBP13.93□□□□□ -0.18
SMG9-202ENST00000594081 MBD5Q9P267 1494 aa13.93□□□□□ -0.18
SMG9-202ENST00000594081 SYNMO15061 1565 aa13.92□□□□□ -0.18
SMG9-202ENST00000594081 EHBP1L1Q8N3D4 1523 aa13.91□□□□□ -0.18
SMG9-202ENST00000594081 UGGT1Q9NYU2 1555 aa13.91□□□□□ -0.18
SMG9-202ENST00000594081 STRCP1A6NGW2 1772 aa13.91□□□□□ -0.18
SMG9-202ENST00000594081 RTEL1-TNFRSF6BF6WH68 1400 aa13.9□□□□□ -0.18
SMG9-202ENST00000594081 MTUS2Q5JR59 1369 aa13.9□□□□□ -0.18
SMG9-202ENST00000594081 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.9□□□□□ -0.18
SMG9-202ENST00000594081 MED14O60244 1454 aa13.9□□□□□ -0.18
SMG9-202ENST00000594081 NLRP1Q9C000 1473 aa13.9□□□□□ -0.18
SMG9-202ENST00000594081 NPHP4O75161 1426 aaPredicted RBP13.9□□□□□ -0.19
SMG9-202ENST00000594081 DHX29Q7Z478 1369 aaKnown RBP13.89□□□□□ -0.19
SMG9-202ENST00000594081 ZNF644Q9H582 1327 aaPredicted RBP13.89□□□□□ -0.19
SMG9-202ENST00000594081 FBXO31Q5XUX0 539 aaPredicted RBP13.88□□□□□ -0.19
SMG9-202ENST00000594081 CCDC141Q6ZP82 1450 aa13.87□□□□□ -0.19
SMG9-202ENST00000594081 ZC3H13Q5T200 1668 aaKnown RBP13.86□□□□□ -0.19
SMG9-202ENST00000594081 ANKLE2Q86XL3 938 aa13.86□□□□□ -0.19
SMG9-202ENST00000594081 LRRC7Q96NW7 1537 aa13.85□□□□□ -0.19
SMG9-202ENST00000594081 MIA2Q96PC5 1412 aa13.85□□□□□ -0.19
SMG9-202ENST00000594081 CAMSAP2Q08AD1 1489 aa13.85□□□□□ -0.19
SMG9-202ENST00000594081 KIF3BO15066 747 aa13.84□□□□□ -0.19
SMG9-202ENST00000594081 CEP162Q5TB80 1403 aa13.83□□□□□ -0.2
SMG9-202ENST00000594081 THEMISQ8N1K5 641 aaPredicted RBP13.82□□□□□ -0.2
SMG9-202ENST00000594081 WASHC2CQ9Y4E1 1318 aa13.82□□□□□ -0.2
SMG9-202ENST00000594081 ABCC3O15438 1527 aa13.81□□□□□ -0.2
SMG9-202ENST00000594081 ARHGEF5Q12774 1597 aa13.81□□□□□ -0.2
SMG9-202ENST00000594081 UBR1Q8IWV7 1749 aa13.81□□□□□ -0.2
SMG9-202ENST00000594081 XIRP1Q702N8 1843 aaKnown RBP13.8□□□□□ -0.2
SMG9-202ENST00000594081 ERVK-7P63135 1459 aa13.8□□□□□ -0.2
SMG9-202ENST00000594081 EIF2AK4Q9P2K8 1649 aaKnown RBP13.79□□□□□ -0.2
SMG9-202ENST00000594081 MROH1Q8NDA8 1641 aa13.79□□□□□ -0.2
SMG9-202ENST00000594081 CEP152O94986 1710 aa13.78□□□□□ -0.2
SMG9-202ENST00000594081 NCOA2Q15596 1464 aa13.78□□□□□ -0.2
SMG9-202ENST00000594081 MAST1Q9Y2H9 1570 aa13.76□□□□□ -0.21
SMG9-202ENST00000594081 SCAF11Q99590 1463 aaKnown RBP13.76□□□□□ -0.21
SMG9-202ENST00000594081 RGS17Q9UGC6 210 aaPredicted RBP13.75□□□□□ -0.21
SMG9-202ENST00000594081 SLIT1O75093 1534 aa13.73□□□□□ -0.21
SMG9-202ENST00000594081 ARHGAP23Q9P227 1491 aa13.73□□□□□ -0.21
SMG9-202ENST00000594081 RSPH4AQ5TD94 716 aa13.72□□□□□ -0.21
SMG9-202ENST00000594081 SETD1AO15047 1707 aaKnown RBP13.72□□□□□ -0.21
SMG9-202ENST00000594081 CFAP65Q6ZU64 1925 aaKnown RBP13.7□□□□□ -0.22
SMG9-202ENST00000594081 PRDM15P57071 1507 aaPredicted RBP13.7□□□□□ -0.22
SMG9-202ENST00000594081 ROBO1Q9Y6N7 1651 aa13.7□□□□□ -0.22
SMG9-202ENST00000594081 PIK3C2BO00750 1634 aa13.69□□□□□ -0.22
SMG9-202ENST00000594081 MAP3K1Q13233 1512 aa13.68□□□□□ -0.22
SMG9-202ENST00000594081 FAM135BQ49AJ0 1406 aa13.67□□□□□ -0.22
SMG9-202ENST00000594081 TSPY4P0CV99 314 aa13.67□□□□□ -0.22
SMG9-202ENST00000594081 TSPY10P0CW01 314 aa13.67□□□□□ -0.22
SMG9-202ENST00000594081 DUOX2Q9NRD8 1548 aa13.66□□□□□ -0.22
SMG9-202ENST00000594081 LTKP29376 864 aa13.66□□□□□ -0.22
SMG9-202ENST00000594081 KDM5AP29375 1690 aaKnown RBP13.66□□□□□ -0.22
SMG9-202ENST00000594081 POTEAQ6S8J7 498 aa13.65□□□□□ -0.22
SMG9-202ENST00000594081 LRRC9Q6ZRR7 1453 aa13.65□□□□□ -0.22
SMG9-202ENST00000594081 CROCC2H7BZ55 1655 aa13.65□□□□□ -0.22
SMG9-202ENST00000594081 ARHGAP31Q2M1Z3 1444 aa13.64□□□□□ -0.23
SMG9-202ENST00000594081 NWD1Q149M9 1564 aa13.63□□□□□ -0.23
SMG9-202ENST00000594081 TMEM94Q12767 1356 aa13.63□□□□□ -0.23
SMG9-202ENST00000594081 TXNDC2Q86VQ3 553 aa13.63□□□□□ -0.23
SMG9-202ENST00000594081 EFCAB6Q5THR3 1501 aa13.63□□□□□ -0.23
SMG9-202ENST00000594081 PHLPP1O60346 1717 aa13.62□□□□□ -0.23
SMG9-202ENST00000594081 TMEM2Q9UHN6 1383 aa13.62□□□□□ -0.23
SMG9-202ENST00000594081 NKTRP30414 1462 aaKnown RBP13.61□□□□□ -0.23
SMG9-202ENST00000594081 EID1Q9Y6B2 187 aa13.61□□□□□ -0.23
SMG9-202ENST00000594081 ERBINQ96RT1 1412 aa13.61□□□□□ -0.23
SMG9-202ENST00000594081 TET3O43151 1660 aa13.59□□□□□ -0.23
SMG9-202ENST00000594081 ADGRB3O60242 1522 aa13.59□□□□□ -0.23
SMG9-202ENST00000594081 KIF15Q9NS87 1388 aa13.58□□□□□ -0.23
SMG9-202ENST00000594081 MYOM3Q5VTT5 1437 aa13.58□□□□□ -0.24
SMG9-202ENST00000594081 COL16A1Q07092 1604 aaPredicted RBP13.57□□□□□ -0.24
SMG9-202ENST00000594081 LMTK2Q8IWU2 1503 aa13.55□□□□□ -0.24
SMG9-202ENST00000594081 KCNA6P17658 529 aa13.55□□□□□ -0.24
SMG9-202ENST00000594081 RBM33Q96EV2 1170 aaKnown RBP13.55□□□□□ -0.24
SMG9-202ENST00000594081 MSH6P52701 1360 aa13.55□□□□□ -0.24
SMG9-202ENST00000594081 STAG3Q9UJ98 1225 aa13.54□□□□□ -0.24
SMG9-202ENST00000594081 JCADQ9P266 1359 aa13.54□□□□□ -0.24
SMG9-202ENST00000594081 VPS8Q8N3P4 1428 aa13.54□□□□□ -0.24
SMG9-202ENST00000594081 LRP6O75581 1613 aa13.53□□□□□ -0.24
SMG9-202ENST00000594081 PROSER2Q86WR7 435 aaPredicted RBP13.53□□□□□ -0.24
SMG9-202ENST00000594081 SLC26A8Q96RN1 970 aa13.53□□□□□ -0.24
SMG9-202ENST00000594081 PTPN23Q9H3S7 1636 aa13.53□□□□□ -0.24
SMG9-202ENST00000594081 KANK1Q14678 1352 aa13.52□□□□□ -0.25
SMG9-202ENST00000594081 ABCC5O15440 1437 aa13.52□□□□□ -0.25
SMG9-202ENST00000594081 CHD2O14647 1828 aaKnown RBP13.52□□□□□ -0.25
SMG9-202ENST00000594081 MYO5BQ9ULV0 1848 aa13.51□□□□□ -0.25
SMG9-202ENST00000594081 SHPRHQ149N8 1683 aa13.51□□□□□ -0.25
SMG9-202ENST00000594081 GCC2Q8IWJ2 1684 aa13.5□□□□□ -0.25
SMG9-202ENST00000594081 NOS1P29475 1434 aa13.5□□□□□ -0.25
SMG9-202ENST00000594081 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms