RNA–Protein interactions for RNA: ENST00000592737.5

NCLN-208, Transcript of nicalin, humanhuman

TSL 3

Gene NCLN, Length 2,735 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-208ENST00000592737 SLC4A3P48751 1232 aa22.49■■□□□ 1.19
NCLN-208ENST00000592737 ADAMTS12P58397 1594 aa22.49■■□□□ 1.19
NCLN-208ENST00000592737 ADGBQ8N7X0 1667 aa22.48■■□□□ 1.19
NCLN-208ENST00000592737 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.47■■□□□ 1.19
NCLN-208ENST00000592737 RAPGEF6Q8TEU7 1601 aa22.46■■□□□ 1.19
NCLN-208ENST00000592737 TROQ12816 1431 aaPredicted RBP22.46■■□□□ 1.19
NCLN-208ENST00000592737 GPATCH8Q9UKJ3 1502 aaKnown RBP22.44■■□□□ 1.18
NCLN-208ENST00000592737 KIAA0556O60303 1618 aa22.44■■□□□ 1.18
NCLN-208ENST00000592737 KIAA0586Q9BVV6 1533 aa22.43■■□□□ 1.18
NCLN-208ENST00000592737 PARD3Q8TEW0 1356 aa22.43■■□□□ 1.18
NCLN-208ENST00000592737 WASHC2CQ9Y4E1 1318 aa22.43■■□□□ 1.18
NCLN-208ENST00000592737 RGL3Q3MIN7 710 aa22.43■■□□□ 1.18
NCLN-208ENST00000592737 DISP1Q96F81 1524 aa22.42■■□□□ 1.18
NCLN-208ENST00000592737 GSE1Q14687 1217 aa22.42■■□□□ 1.18
NCLN-208ENST00000592737 BRPF3Q9ULD4 1205 aa22.42■■□□□ 1.18
NCLN-208ENST00000592737 ADGRL2O95490 1459 aa22.42■■□□□ 1.18
NCLN-208ENST00000592737 NFKBIBQ15653 356 aa22.41■■□□□ 1.18
NCLN-208ENST00000592737 DNAJC5BQ9UF47 199 aa22.41■■□□□ 1.18
NCLN-208ENST00000592737 C20orf194Q5TEA3 1177 aa22.41■■□□□ 1.18
NCLN-208ENST00000592737 ITSN2Q9NZM3 1697 aa22.41■■□□□ 1.18
NCLN-208ENST00000592737 TSPY4P0CV99 314 aa22.4■■□□□ 1.18
NCLN-208ENST00000592737 TSPY10P0CW01 314 aa22.4■■□□□ 1.18
NCLN-208ENST00000592737 ARHGEF12Q9NZN5 1544 aa22.4■■□□□ 1.18
NCLN-208ENST00000592737 NBPF1Q3BBV0 1214 aa22.37■■□□□ 1.17
NCLN-208ENST00000592737 E9PCH4 1651 aa22.36■■□□□ 1.17
NCLN-208ENST00000592737 PER1O15534 1290 aaPredicted RBP22.36■■□□□ 1.17
NCLN-208ENST00000592737 CROCC2H7BZ55 1655 aa22.35■■□□□ 1.17
NCLN-208ENST00000592737 PANK3Q9H999 370 aa22.35■■□□□ 1.17
NCLN-208ENST00000592737 C9orf84Q5VXU9 1444 aa22.34■■□□□ 1.17
NCLN-208ENST00000592737 PLB1Q6P1J6 1458 aa22.34■■□□□ 1.17
NCLN-208ENST00000592737 FRAT1Q92837 279 aaPredicted RBP22.33■■□□□ 1.17
NCLN-208ENST00000592737 RGS3P49796 1198 aa22.31■■□□□ 1.16
NCLN-208ENST00000592737 HNRNPMP52272 730 aaKnown RBP eCLIP22.31■■□□□ 1.16
NCLN-208ENST00000592737 PLEKHD1A6NEE1 506 aa22.3■■□□□ 1.16
NCLN-208ENST00000592737 CENPQQ7L2Z9 268 aaPredicted RBP22.3■■□□□ 1.16
NCLN-208ENST00000592737 ADAMTS8Q9UP79 889 aa22.3■■□□□ 1.16
NCLN-208ENST00000592737 FAM161AQ3B820 660 aa22.29■■□□□ 1.16
NCLN-208ENST00000592737 ZNF608Q9ULD9 1512 aaPredicted RBP22.29■■□□□ 1.16
NCLN-208ENST00000592737 BLMP54132 1417 aaPredicted RBP22.28■■□□□ 1.16
NCLN-208ENST00000592737 DISP3Q9P2K9 1392 aa22.27■■□□□ 1.16
NCLN-208ENST00000592737 FBLN2P98095 1184 aa22.27■■□□□ 1.16
NCLN-208ENST00000592737 CEP170Q5SW79 1584 aa22.27■■□□□ 1.16
NCLN-208ENST00000592737 WDR43Q15061 677 aaKnown RBP eCLIP22.27■■□□□ 1.166e-7■■■■□ 23.5
NCLN-208ENST00000592737 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.27■■□□□ 1.163e-6■□□□□ 11.3
NCLN-208ENST00000592737 KDM2BQ8NHM5 1336 aa22.26■■□□□ 1.15
NCLN-208ENST00000592737 CCDC144AA2RUR9 1427 aa22.26■■□□□ 1.15
NCLN-208ENST00000592737 PRAG1Q86YV5 1406 aa22.25■■□□□ 1.15
NCLN-208ENST00000592737 TMF1P82094 1093 aa22.24■■□□□ 1.15
NCLN-208ENST00000592737 C8orf34Q49A92 452 aa22.23■■□□□ 1.15
NCLN-208ENST00000592737 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.23■■□□□ 1.15
NCLN-208ENST00000592737 FRAT2O75474 233 aaPredicted RBP22.23■■□□□ 1.15
NCLN-208ENST00000592737 ZMYM4Q5VZL5 1548 aa22.23■■□□□ 1.15
NCLN-208ENST00000592737 EIF5BO60841 1220 aaKnown RBP22.22■■□□□ 1.15
NCLN-208ENST00000592737 KDM5DQ9BY66 1539 aa22.22■■□□□ 1.15
NCLN-208ENST00000592737 TESK2Q96S53 571 aa22.21■■□□□ 1.15
NCLN-208ENST00000592737 PLEKHH2Q8IVE3 1493 aa22.21■■□□□ 1.15
NCLN-208ENST00000592737 CHMP7Q8WUX9 453 aaPredicted RBP22.21■■□□□ 1.15
NCLN-208ENST00000592737 GRIN2AQ12879 1464 aa22.2■■□□□ 1.14
NCLN-208ENST00000592737 COL17A1Q9UMD9 1497 aaPredicted RBP22.2■■□□□ 1.14
NCLN-208ENST00000592737 TRPM1Q7Z4N2 1603 aa22.2■■□□□ 1.14
NCLN-208ENST00000592737 ADCY10Q96PN6 1610 aa22.2■■□□□ 1.14
NCLN-208ENST00000592737 DUSP27Q5VZP5 1158 aa22.2■■□□□ 1.14
NCLN-208ENST00000592737 CDC42BPAQ5VT25 1732 aa22.2■■□□□ 1.14
NCLN-208ENST00000592737 ERBINQ96RT1 1412 aa22.19■■□□□ 1.14
NCLN-208ENST00000592737 SHANK2Q9UPX8 1470 aa22.19■■□□□ 1.14
NCLN-208ENST00000592737 GOLGA2Q08379 1002 aa22.19■■□□□ 1.14
NCLN-208ENST00000592737 KNSTRNQ9Y448 316 aa22.18■■□□□ 1.14
NCLN-208ENST00000592737 PLEKHH1Q9ULM0 1364 aa22.17■■□□□ 1.14
NCLN-208ENST00000592737 MRC2Q9UBG0 1479 aa22.17■■□□□ 1.14
NCLN-208ENST00000592737 FAM135AQ9P2D6 1515 aa22.16■■□□□ 1.14
NCLN-208ENST00000592737 INSRP06213 1382 aa22.16■■□□□ 1.14
NCLN-208ENST00000592737 PTPRGP23470 1445 aa22.15■■□□□ 1.14
NCLN-208ENST00000592737 PPP2R1AP30153 589 aa22.14■■□□□ 1.13
NCLN-208ENST00000592737 CCDC146Q8IYE0 955 aa22.14■■□□□ 1.13
NCLN-208ENST00000592737 CARMIL2Q6F5E8 1435 aa22.13■■□□□ 1.13
NCLN-208ENST00000592737 IFT140Q96RY7 1462 aa22.12■■□□□ 1.13
NCLN-208ENST00000592737 MAGI1Q96QZ7 1491 aaPredicted RBP22.12■■□□□ 1.13
NCLN-208ENST00000592737 JPH4Q96JJ6 628 aa22.12■■□□□ 1.13
NCLN-208ENST00000592737 A2MP01023 1474 aa22.11■■□□□ 1.13
NCLN-208ENST00000592737 GPRASP1Q5JY77 1395 aa22.11■■□□□ 1.13
NCLN-208ENST00000592737 ABCC10Q5T3U5 1492 aa22.09■■□□□ 1.13
NCLN-208ENST00000592737 EIF4G3O43432 1585 aaKnown RBP22.09■■□□□ 1.13
NCLN-208ENST00000592737 BCAR3O75815 825 aa22.08■■□□□ 1.12
NCLN-208ENST00000592737 PRDM15P57071 1507 aaPredicted RBP22.07■■□□□ 1.12
NCLN-208ENST00000592737 SLFN5Q08AF3 891 aa22.07■■□□□ 1.12
NCLN-208ENST00000592737 ATP10BO94823 1461 aa22.05■■□□□ 1.12
NCLN-208ENST00000592737 CANXP27824 592 aaKnown RBP22.04■■□□□ 1.12
NCLN-208ENST00000592737 ZNF521Q96K83 1311 aa22.03■■□□□ 1.12
NCLN-208ENST00000592737 APAF1O14727 1248 aa22.03■■□□□ 1.12
NCLN-208ENST00000592737 SLKQ9H2G2 1235 aaPredicted RBP22.03■■□□□ 1.12
NCLN-208ENST00000592737 PLA2R1Q13018 1463 aa22.03■■□□□ 1.12
NCLN-208ENST00000592737 CCDC141Q6ZP82 1450 aa22.03■■□□□ 1.12
NCLN-208ENST00000592737 SPINK5Q9NQ38 1064 aaPredicted RBP22.03■■□□□ 1.12
NCLN-208ENST00000592737 MAGI2Q86UL8 1455 aa22.02■■□□□ 1.12
NCLN-208ENST00000592737 IGHDP01880 384 aa22.01■■□□□ 1.11
NCLN-208ENST00000592737 AMER1Q5JTC6 1135 aaPredicted RBP22■■□□□ 1.11
NCLN-208ENST00000592737 POGKQ9P215 609 aa22■■□□□ 1.11
NCLN-208ENST00000592737 BECN1Q14457 450 aa21.99■■□□□ 1.11
NCLN-208ENST00000592737 ARHGEF5Q12774 1597 aa21.99■■□□□ 1.11
NCLN-208ENST00000592737 SEC24BO95487 1268 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms