RNA–Protein interactions for RNA: ENST00000590118.5

CROCCP3-204, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 4 BASIC

Gene CROCCP3, Length 574 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-204ENST00000590118 NEURL4Q96JN8 1562 aa22.83■■□□□ 1.25
CROCCP3-204ENST00000590118 MBD5Q9P267 1494 aa22.81■■□□□ 1.24
CROCCP3-204ENST00000590118 MTUS2Q5JR59 1369 aa22.81■■□□□ 1.24
CROCCP3-204ENST00000590118 DHX29Q7Z478 1369 aaKnown RBP22.81■■□□□ 1.24
CROCCP3-204ENST00000590118 TNRQ92752 1358 aa22.81■■□□□ 1.24
CROCCP3-204ENST00000590118 FBXO31Q5XUX0 539 aaPredicted RBP22.81■■□□□ 1.24
CROCCP3-204ENST00000590118 RTEL1-TNFRSF6BF6WH68 1400 aa22.81■■□□□ 1.24
CROCCP3-204ENST00000590118 KIF3BO15066 747 aa22.77■■□□□ 1.24
CROCCP3-204ENST00000590118 ANKLE2Q86XL3 938 aa22.77■■□□□ 1.24
CROCCP3-204ENST00000590118 PZPP20742 1482 aa22.76■■□□□ 1.23
CROCCP3-204ENST00000590118 TIAM1Q13009 1591 aa22.76■■□□□ 1.23
CROCCP3-204ENST00000590118 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.75■■□□□ 1.23
CROCCP3-204ENST00000590118 THEMISQ8N1K5 641 aaPredicted RBP22.74■■□□□ 1.23
CROCCP3-204ENST00000590118 VWDEQ8N2E2 1590 aa22.74■■□□□ 1.23
CROCCP3-204ENST00000590118 KDM5DQ9BY66 1539 aa22.73■■□□□ 1.23
CROCCP3-204ENST00000590118 FAM135AQ9P2D6 1515 aa22.72■■□□□ 1.23
CROCCP3-204ENST00000590118 ALKQ9UM73 1620 aa22.71■■□□□ 1.23
CROCCP3-204ENST00000590118 PHF23Q9BUL5 403 aaPredicted RBP22.71■■□□□ 1.23
CROCCP3-204ENST00000590118 WASHC2CQ9Y4E1 1318 aa22.71■■□□□ 1.23
CROCCP3-204ENST00000590118 MIA2Q96PC5 1412 aa22.71■■□□□ 1.23
CROCCP3-204ENST00000590118 MED14O60244 1454 aa22.71■■□□□ 1.23
CROCCP3-204ENST00000590118 NPHP4O75161 1426 aaPredicted RBP22.7■■□□□ 1.22
CROCCP3-204ENST00000590118 NLRP1Q9C000 1473 aa22.69■■□□□ 1.22
CROCCP3-204ENST00000590118 DEPDC5O75140 1603 aa22.68■■□□□ 1.22
CROCCP3-204ENST00000590118 UGGT1Q9NYU2 1555 aa22.68■■□□□ 1.22
CROCCP3-204ENST00000590118 EHBP1L1Q8N3D4 1523 aa22.68■■□□□ 1.22
CROCCP3-204ENST00000590118 CEP162Q5TB80 1403 aa22.67■■□□□ 1.22
CROCCP3-204ENST00000590118 CCDC141Q6ZP82 1450 aa22.66■■□□□ 1.22
CROCCP3-204ENST00000590118 RSPH4AQ5TD94 716 aa22.65■■□□□ 1.22
CROCCP3-204ENST00000590118 IQGAP1P46940 1657 aa22.63■■□□□ 1.21
CROCCP3-204ENST00000590118 STRCP1A6NGW2 1772 aa22.62■■□□□ 1.21
CROCCP3-204ENST00000590118 LRRC7Q96NW7 1537 aa22.61■■□□□ 1.21
CROCCP3-204ENST00000590118 CAMSAP2Q08AD1 1489 aa22.6■■□□□ 1.21
CROCCP3-204ENST00000590118 SENP3Q9H4L4 574 aaPredicted RBP22.59■■□□□ 1.21
CROCCP3-204ENST00000590118 NCOA2Q15596 1464 aa22.56■■□□□ 1.2
CROCCP3-204ENST00000590118 RNF17Q9BXT8 1623 aaKnown RBP22.56■■□□□ 1.2
CROCCP3-204ENST00000590118 SYNMO15061 1565 aa22.55■■□□□ 1.2
CROCCP3-204ENST00000590118 TSPY4P0CV99 314 aa22.55■■□□□ 1.2
CROCCP3-204ENST00000590118 TSPY10P0CW01 314 aa22.55■■□□□ 1.2
CROCCP3-204ENST00000590118 ARHGEF5Q12774 1597 aa22.54■■□□□ 1.2
CROCCP3-204ENST00000590118 ABCC3O15438 1527 aa22.52■■□□□ 1.2
CROCCP3-204ENST00000590118 CFAP65Q6ZU64 1925 aaKnown RBP22.51■■□□□ 1.19
CROCCP3-204ENST00000590118 RGS17Q9UGC6 210 aaPredicted RBP22.51■■□□□ 1.19
CROCCP3-204ENST00000590118 ERVK-7P63135 1459 aa22.51■■□□□ 1.19
CROCCP3-204ENST00000590118 ZC3H13Q5T200 1668 aaKnown RBP22.51■■□□□ 1.19
CROCCP3-204ENST00000590118 UBR1Q8IWV7 1749 aa22.47■■□□□ 1.19
CROCCP3-204ENST00000590118 SCAF11Q99590 1463 aaKnown RBP22.46■■□□□ 1.19
CROCCP3-204ENST00000590118 LTKP29376 864 aa22.44■■□□□ 1.18
CROCCP3-204ENST00000590118 XIRP1Q702N8 1843 aaKnown RBP22.44■■□□□ 1.18
CROCCP3-204ENST00000590118 EIF2AK4Q9P2K8 1649 aaKnown RBP22.44■■□□□ 1.18
CROCCP3-204ENST00000590118 MAST1Q9Y2H9 1570 aa22.44■■□□□ 1.18
CROCCP3-204ENST00000590118 MROH1Q8NDA8 1641 aa22.43■■□□□ 1.18
CROCCP3-204ENST00000590118 TXNDC2Q86VQ3 553 aa22.43■■□□□ 1.18
CROCCP3-204ENST00000590118 ARHGAP23Q9P227 1491 aa22.42■■□□□ 1.18
CROCCP3-204ENST00000590118 CEP152O94986 1710 aa22.42■■□□□ 1.18
CROCCP3-204ENST00000590118 SLIT1O75093 1534 aa22.41■■□□□ 1.18
CROCCP3-204ENST00000590118 FAM135BQ49AJ0 1406 aa22.39■■□□□ 1.17
CROCCP3-204ENST00000590118 EID1Q9Y6B2 187 aa22.36■■□□□ 1.17
CROCCP3-204ENST00000590118 POTEAQ6S8J7 498 aa22.35■■□□□ 1.17
CROCCP3-204ENST00000590118 ARHGAP31Q2M1Z3 1444 aa22.34■■□□□ 1.17
CROCCP3-204ENST00000590118 DUOX2Q9NRD8 1548 aa22.33■■□□□ 1.17
CROCCP3-204ENST00000590118 LRRC9Q6ZRR7 1453 aa22.33■■□□□ 1.16
CROCCP3-204ENST00000590118 TMEM2Q9UHN6 1383 aa22.31■■□□□ 1.16
CROCCP3-204ENST00000590118 TMEM94Q12767 1356 aa22.3■■□□□ 1.16
CROCCP3-204ENST00000590118 PIK3C2BO00750 1634 aa22.29■■□□□ 1.16
CROCCP3-204ENST00000590118 PRDM15P57071 1507 aaPredicted RBP22.29■■□□□ 1.16
CROCCP3-204ENST00000590118 KCNA6P17658 529 aa22.28■■□□□ 1.16
CROCCP3-204ENST00000590118 MYOM3Q5VTT5 1437 aa22.27■■□□□ 1.16
CROCCP3-204ENST00000590118 STAG3Q9UJ98 1225 aa22.27■■□□□ 1.16
CROCCP3-204ENST00000590118 ROBO1Q9Y6N7 1651 aa22.26■■□□□ 1.15
CROCCP3-204ENST00000590118 PROSER2Q86WR7 435 aaPredicted RBP22.25■■□□□ 1.15
CROCCP3-204ENST00000590118 KIF15Q9NS87 1388 aa22.25■■□□□ 1.15
CROCCP3-204ENST00000590118 KANK4Q5T7N3 995 aaPredicted RBP22.24■■□□□ 1.15
CROCCP3-204ENST00000590118 MAP3K1Q13233 1512 aa22.24■■□□□ 1.15
CROCCP3-204ENST00000590118 ERBINQ96RT1 1412 aa22.23■■□□□ 1.15
CROCCP3-204ENST00000590118 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.23■■□□□ 1.15
CROCCP3-204ENST00000590118 KDM5AP29375 1690 aaKnown RBP22.23■■□□□ 1.15
CROCCP3-204ENST00000590118 EFCAB6Q5THR3 1501 aa22.22■■□□□ 1.15
CROCCP3-204ENST00000590118 IDI1Q13907 227 aa22.22■■□□□ 1.15
CROCCP3-204ENST00000590118 RBM33Q96EV2 1170 aaKnown RBP22.22■■□□□ 1.15
CROCCP3-204ENST00000590118 SLC26A8Q96RN1 970 aa22.22■■□□□ 1.15
CROCCP3-204ENST00000590118 TET3O43151 1660 aa22.22■■□□□ 1.15
CROCCP3-204ENST00000590118 RRP7BPQ9NSQ0 103 aa22.21■■□□□ 1.15
CROCCP3-204ENST00000590118 VPS8Q8N3P4 1428 aa22.21■■□□□ 1.15
CROCCP3-204ENST00000590118 KANK1Q14678 1352 aa22.19■■□□□ 1.14
CROCCP3-204ENST00000590118 ABCC5O15440 1437 aa22.18■■□□□ 1.14
CROCCP3-204ENST00000590118 NKTRP30414 1462 aaKnown RBP22.16■■□□□ 1.14
CROCCP3-204ENST00000590118 SETD1AO15047 1707 aaKnown RBP22.16■■□□□ 1.14
CROCCP3-204ENST00000590118 CROCC2H7BZ55 1655 aa22.16■■□□□ 1.14
CROCCP3-204ENST00000590118 NWD1Q149M9 1564 aa22.16■■□□□ 1.14
CROCCP3-204ENST00000590118 MSH6P52701 1360 aa22.15■■□□□ 1.14
CROCCP3-204ENST00000590118 SLAIN2Q9P270 581 aa22.15■■□□□ 1.14
CROCCP3-204ENST00000590118 LMTK2Q8IWU2 1503 aa22.15■■□□□ 1.14
CROCCP3-204ENST00000590118 PHLPP1O60346 1717 aa22.14■■□□□ 1.13
CROCCP3-204ENST00000590118 JCADQ9P266 1359 aa22.13■■□□□ 1.13
CROCCP3-204ENST00000590118 NOS1P29475 1434 aa22.12■■□□□ 1.13
CROCCP3-204ENST00000590118 ADGRB3O60242 1522 aa22.11■■□□□ 1.13
CROCCP3-204ENST00000590118 DAPK1P53355 1430 aa22.1■■□□□ 1.13
CROCCP3-204ENST00000590118 BCANQ96GW7 911 aa22.1■■□□□ 1.13
CROCCP3-204ENST00000590118 PTPN23Q9H3S7 1636 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms