RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 SHANK2Q9UPX8 1470 aa20.94■□□□□ 0.94
PRKCSH-210ENST00000589990 MBD5Q9P267 1494 aa20.93■□□□□ 0.94
PRKCSH-210ENST00000589990 CPS1P31327 1500 aa20.91■□□□□ 0.94
PRKCSH-210ENST00000589990 TIAM1Q13009 1591 aa20.91■□□□□ 0.94
PRKCSH-210ENST00000589990 VWDEQ8N2E2 1590 aa20.91■□□□□ 0.94
PRKCSH-210ENST00000589990 TNRQ92752 1358 aa20.9■□□□□ 0.94
PRKCSH-210ENST00000589990 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.89■□□□□ 0.93
PRKCSH-210ENST00000589990 TOM1O60784 492 aa20.89■□□□□ 0.93
PRKCSH-210ENST00000589990 DHX29Q7Z478 1369 aaKnown RBP20.87■□□□□ 0.93
PRKCSH-210ENST00000589990 SENP3Q9H4L4 574 aaPredicted RBP20.87■□□□□ 0.93
PRKCSH-210ENST00000589990 MTUS2Q5JR59 1369 aa20.86■□□□□ 0.93
PRKCSH-210ENST00000589990 PZPP20742 1482 aa20.86■□□□□ 0.93
PRKCSH-210ENST00000589990 KIF3BO15066 747 aa20.85■□□□□ 0.93
PRKCSH-210ENST00000589990 STRCP1A6NGW2 1772 aa20.85■□□□□ 0.93
PRKCSH-210ENST00000589990 KDM5DQ9BY66 1539 aa20.83■□□□□ 0.93
PRKCSH-210ENST00000589990 RTEL1-TNFRSF6BF6WH68 1400 aa20.83■□□□□ 0.93
PRKCSH-210ENST00000589990 NPHP4O75161 1426 aaPredicted RBP20.81■□□□□ 0.92
PRKCSH-210ENST00000589990 ANKLE2Q86XL3 938 aa20.81■□□□□ 0.92
PRKCSH-210ENST00000589990 PHF23Q9BUL5 403 aaPredicted RBP20.8■□□□□ 0.92
PRKCSH-210ENST00000589990 UGGT1Q9NYU2 1555 aa20.8■□□□□ 0.92
PRKCSH-210ENST00000589990 MIA2Q96PC5 1412 aa20.79■□□□□ 0.92
PRKCSH-210ENST00000589990 MED14O60244 1454 aa20.79■□□□□ 0.92
PRKCSH-210ENST00000589990 WASHC2CQ9Y4E1 1318 aa20.78■□□□□ 0.92
PRKCSH-210ENST00000589990 DEPDC5O75140 1603 aa20.78■□□□□ 0.92
PRKCSH-210ENST00000589990 EHBP1L1Q8N3D4 1523 aa20.78■□□□□ 0.92
PRKCSH-210ENST00000589990 IQGAP1P46940 1657 aa20.77■□□□□ 0.92
PRKCSH-210ENST00000589990 CCDC141Q6ZP82 1450 aa20.76■□□□□ 0.91
PRKCSH-210ENST00000589990 THEMISQ8N1K5 641 aaPredicted RBP20.76■□□□□ 0.91
PRKCSH-210ENST00000589990 LRRC7Q96NW7 1537 aa20.76■□□□□ 0.91
PRKCSH-210ENST00000589990 NLRP1Q9C000 1473 aa20.75■□□□□ 0.91
PRKCSH-210ENST00000589990 CAMSAP2Q08AD1 1489 aa20.75■□□□□ 0.91
PRKCSH-210ENST00000589990 FAM135AQ9P2D6 1515 aa20.74■□□□□ 0.91
PRKCSH-210ENST00000589990 CEP162Q5TB80 1403 aa20.74■□□□□ 0.91
PRKCSH-210ENST00000589990 RGS17Q9UGC6 210 aaPredicted RBP20.71■□□□□ 0.91
PRKCSH-210ENST00000589990 RNF17Q9BXT8 1623 aaKnown RBP20.71■□□□□ 0.91
PRKCSH-210ENST00000589990 ZC3H13Q5T200 1668 aaKnown RBP20.7■□□□□ 0.9
PRKCSH-210ENST00000589990 NCOA2Q15596 1464 aa20.69■□□□□ 0.9
PRKCSH-210ENST00000589990 ABCC3O15438 1527 aa20.68■□□□□ 0.9
PRKCSH-210ENST00000589990 SYNMO15061 1565 aa20.68■□□□□ 0.9
PRKCSH-210ENST00000589990 XIRP1Q702N8 1843 aaKnown RBP20.65■□□□□ 0.9
PRKCSH-210ENST00000589990 ERVK-7P63135 1459 aa20.65■□□□□ 0.9
PRKCSH-210ENST00000589990 ARHGEF5Q12774 1597 aa20.64■□□□□ 0.9
PRKCSH-210ENST00000589990 CFAP65Q6ZU64 1925 aaKnown RBP20.64■□□□□ 0.89
PRKCSH-210ENST00000589990 UBR1Q8IWV7 1749 aa20.64■□□□□ 0.89
PRKCSH-210ENST00000589990 MROH1Q8NDA8 1641 aa20.64■□□□□ 0.89
PRKCSH-210ENST00000589990 CEP152O94986 1710 aa20.62■□□□□ 0.89
PRKCSH-210ENST00000589990 LTKP29376 864 aa20.61■□□□□ 0.89
PRKCSH-210ENST00000589990 SCAF11Q99590 1463 aaKnown RBP20.59■□□□□ 0.89
PRKCSH-210ENST00000589990 RSPH4AQ5TD94 716 aa20.59■□□□□ 0.89
PRKCSH-210ENST00000589990 TSPY4P0CV99 314 aa20.57■□□□□ 0.88
PRKCSH-210ENST00000589990 TSPY10P0CW01 314 aa20.57■□□□□ 0.88
PRKCSH-210ENST00000589990 ARHGAP23Q9P227 1491 aa20.56■□□□□ 0.88
PRKCSH-210ENST00000589990 MAST1Q9Y2H9 1570 aa20.55■□□□□ 0.88
PRKCSH-210ENST00000589990 POTEAQ6S8J7 498 aa20.55■□□□□ 0.88
PRKCSH-210ENST00000589990 EIF2AK4Q9P2K8 1649 aaKnown RBP20.55■□□□□ 0.88
PRKCSH-210ENST00000589990 SLIT1O75093 1534 aa20.53■□□□□ 0.88
PRKCSH-210ENST00000589990 TXNDC2Q86VQ3 553 aa20.53■□□□□ 0.88
PRKCSH-210ENST00000589990 RBM33Q96EV2 1170 aaKnown RBP20.5■□□□□ 0.87
PRKCSH-210ENST00000589990 PIK3C2BO00750 1634 aa20.49■□□□□ 0.87
PRKCSH-210ENST00000589990 SETD1AO15047 1707 aaKnown RBP20.48■□□□□ 0.87
PRKCSH-210ENST00000589990 FAM135BQ49AJ0 1406 aa20.48■□□□□ 0.87
PRKCSH-210ENST00000589990 ROBO1Q9Y6N7 1651 aa20.47■□□□□ 0.87
PRKCSH-210ENST00000589990 TMEM94Q12767 1356 aa20.46■□□□□ 0.87
PRKCSH-210ENST00000589990 LRRC9Q6ZRR7 1453 aa20.46■□□□□ 0.87
PRKCSH-210ENST00000589990 MAP3K1Q13233 1512 aa20.45■□□□□ 0.86
PRKCSH-210ENST00000589990 PRDM15P57071 1507 aaPredicted RBP20.44■□□□□ 0.86
PRKCSH-210ENST00000589990 DUOX2Q9NRD8 1548 aa20.44■□□□□ 0.86
PRKCSH-210ENST00000589990 TMEM2Q9UHN6 1383 aa20.44■□□□□ 0.86
PRKCSH-210ENST00000589990 KANK4Q5T7N3 995 aaPredicted RBP20.43■□□□□ 0.86
PRKCSH-210ENST00000589990 ARHGAP31Q2M1Z3 1444 aa20.43■□□□□ 0.86
PRKCSH-210ENST00000589990 EID1Q9Y6B2 187 aa20.42■□□□□ 0.86
PRKCSH-210ENST00000589990 SLC26A8Q96RN1 970 aa20.41■□□□□ 0.86
PRKCSH-210ENST00000589990 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.4■□□□□ 0.863e-10■■□□□ 11.5
PRKCSH-210ENST00000589990 TET3O43151 1660 aa20.39■□□□□ 0.86
PRKCSH-210ENST00000589990 KIF15Q9NS87 1388 aa20.39■□□□□ 0.85
PRKCSH-210ENST00000589990 EFCAB6Q5THR3 1501 aa20.37■□□□□ 0.85
PRKCSH-210ENST00000589990 MYOM3Q5VTT5 1437 aa20.37■□□□□ 0.85
PRKCSH-210ENST00000589990 KCNA6P17658 529 aa20.37■□□□□ 0.85
PRKCSH-210ENST00000589990 PROSER2Q86WR7 435 aaPredicted RBP20.37■□□□□ 0.85
PRKCSH-210ENST00000589990 RRP7BPQ9NSQ0 103 aa20.37■□□□□ 0.85
PRKCSH-210ENST00000589990 IDI1Q13907 227 aa20.36■□□□□ 0.85
PRKCSH-210ENST00000589990 CROCC2H7BZ55 1655 aa20.35■□□□□ 0.85
PRKCSH-210ENST00000589990 STAG3Q9UJ98 1225 aa20.35■□□□□ 0.85
PRKCSH-210ENST00000589990 ABCC5O15440 1437 aa20.35■□□□□ 0.85
PRKCSH-210ENST00000589990 ERBINQ96RT1 1412 aa20.34■□□□□ 0.85
PRKCSH-210ENST00000589990 NWD1Q149M9 1564 aa20.34■□□□□ 0.85
PRKCSH-210ENST00000589990 PHLPP1O60346 1717 aa20.33■□□□□ 0.85
PRKCSH-210ENST00000589990 VPS8Q8N3P4 1428 aa20.33■□□□□ 0.84
PRKCSH-210ENST00000589990 KDM5AP29375 1690 aaKnown RBP20.32■□□□□ 0.84
PRKCSH-210ENST00000589990 NKTRP30414 1462 aaKnown RBP20.3■□□□□ 0.84
PRKCSH-210ENST00000589990 LRP6O75581 1613 aa20.29■□□□□ 0.84
PRKCSH-210ENST00000589990 ADGRB3O60242 1522 aa20.28■□□□□ 0.84
PRKCSH-210ENST00000589990 SLAIN2Q9P270 581 aa20.28■□□□□ 0.84
PRKCSH-210ENST00000589990 LMTK2Q8IWU2 1503 aa20.27■□□□□ 0.84
PRKCSH-210ENST00000589990 COL16A1Q07092 1604 aaPredicted RBP20.27■□□□□ 0.84
PRKCSH-210ENST00000589990 PTPN23Q9H3S7 1636 aa20.27■□□□□ 0.83
PRKCSH-210ENST00000589990 NOS1P29475 1434 aa20.27■□□□□ 0.83
PRKCSH-210ENST00000589990 MSH6P52701 1360 aa20.26■□□□□ 0.83
PRKCSH-210ENST00000589990 JCADQ9P266 1359 aa20.26■□□□□ 0.83
PRKCSH-210ENST00000589990 DAPK1P53355 1430 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms