RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 NEURL4Q96JN8 1562 aa24.48■■□□□ 1.51
SF3A2-204ENST00000589118 KIF3BO15066 747 aa24.47■■□□□ 1.51
SF3A2-204ENST00000589118 DHX29Q7Z478 1369 aaKnown RBP24.45■■□□□ 1.5
SF3A2-204ENST00000589118 TNRQ92752 1358 aa24.43■■□□□ 1.5
SF3A2-204ENST00000589118 SENP3Q9H4L4 574 aaPredicted RBP24.43■■□□□ 1.5
SF3A2-204ENST00000589118 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.42■■□□□ 1.55e-8■□□□□ 8.8
SF3A2-204ENST00000589118 MED1Q15648 1581 aaPredicted RBP24.42■■□□□ 1.5
SF3A2-204ENST00000589118 SHANK2Q9UPX8 1470 aa24.41■■□□□ 1.5
SF3A2-204ENST00000589118 RTEL1-TNFRSF6BF6WH68 1400 aa24.4■■□□□ 1.5
SF3A2-204ENST00000589118 EHBP1L1Q8N3D4 1523 aa24.38■■□□□ 1.49
SF3A2-204ENST00000589118 WASHC2CQ9Y4E1 1318 aa24.37■■□□□ 1.49
SF3A2-204ENST00000589118 TOM1O60784 492 aa24.37■■□□□ 1.49
SF3A2-204ENST00000589118 PZPP20742 1482 aa24.36■■□□□ 1.49
SF3A2-204ENST00000589118 VWDEQ8N2E2 1590 aa24.36■■□□□ 1.49
SF3A2-204ENST00000589118 KDM5DQ9BY66 1539 aa24.35■■□□□ 1.49
SF3A2-204ENST00000589118 ALKQ9UM73 1620 aa24.35■■□□□ 1.49
SF3A2-204ENST00000589118 ANKLE2Q86XL3 938 aa24.35■■□□□ 1.49
SF3A2-204ENST00000589118 CPS1P31327 1500 aa24.35■■□□□ 1.49
SF3A2-204ENST00000589118 CAMSAP2Q08AD1 1489 aa24.34■■□□□ 1.49
SF3A2-204ENST00000589118 CEP162Q5TB80 1403 aa24.34■■□□□ 1.49
SF3A2-204ENST00000589118 STRCP1A6NGW2 1772 aa24.33■■□□□ 1.49
SF3A2-204ENST00000589118 CCDC141Q6ZP82 1450 aa24.32■■□□□ 1.48
SF3A2-204ENST00000589118 MIA2Q96PC5 1412 aa24.32■■□□□ 1.48
SF3A2-204ENST00000589118 THEMISQ8N1K5 641 aaPredicted RBP24.31■■□□□ 1.48
SF3A2-204ENST00000589118 NCOA2Q15596 1464 aa24.31■■□□□ 1.48
SF3A2-204ENST00000589118 UGGT1Q9NYU2 1555 aa24.3■■□□□ 1.48
SF3A2-204ENST00000589118 NPHP4O75161 1426 aaPredicted RBP24.3■■□□□ 1.48
SF3A2-204ENST00000589118 CFAP65Q6ZU64 1925 aaKnown RBP24.29■■□□□ 1.48
SF3A2-204ENST00000589118 IQGAP1P46940 1657 aa24.25■■□□□ 1.47
SF3A2-204ENST00000589118 MED14O60244 1454 aa24.24■■□□□ 1.47
SF3A2-204ENST00000589118 NLRP1Q9C000 1473 aa24.24■■□□□ 1.47
SF3A2-204ENST00000589118 FAM135AQ9P2D6 1515 aa24.24■■□□□ 1.47
SF3A2-204ENST00000589118 DEPDC5O75140 1603 aa24.24■■□□□ 1.47
SF3A2-204ENST00000589118 PHF23Q9BUL5 403 aaPredicted RBP24.22■■□□□ 1.47
SF3A2-204ENST00000589118 LRRC7Q96NW7 1537 aa24.2■■□□□ 1.47
SF3A2-204ENST00000589118 TSPY4P0CV99 314 aa24.2■■□□□ 1.46
SF3A2-204ENST00000589118 TSPY10P0CW01 314 aa24.2■■□□□ 1.46
SF3A2-204ENST00000589118 ARHGEF5Q12774 1597 aa24.2■■□□□ 1.46
SF3A2-204ENST00000589118 RSPH4AQ5TD94 716 aa24.19■■□□□ 1.46
SF3A2-204ENST00000589118 ABCC3O15438 1527 aa24.19■■□□□ 1.46
SF3A2-204ENST00000589118 CEP152O94986 1710 aa24.18■■□□□ 1.46
SF3A2-204ENST00000589118 RNF17Q9BXT8 1623 aaKnown RBP24.17■■□□□ 1.46
SF3A2-204ENST00000589118 ZC3H13Q5T200 1668 aaKnown RBP24.15■■□□□ 1.46
SF3A2-204ENST00000589118 ERVK-7P63135 1459 aa24.14■■□□□ 1.46
SF3A2-204ENST00000589118 MROH1Q8NDA8 1641 aa24.13■■□□□ 1.45
SF3A2-204ENST00000589118 UBR1Q8IWV7 1749 aa24.13■■□□□ 1.45
SF3A2-204ENST00000589118 LTKP29376 864 aa24.12■■□□□ 1.45
SF3A2-204ENST00000589118 XIRP1Q702N8 1843 aaKnown RBP24.12■■□□□ 1.45
SF3A2-204ENST00000589118 KANK4Q5T7N3 995 aaPredicted RBP24.09■■□□□ 1.45
SF3A2-204ENST00000589118 RGS17Q9UGC6 210 aaPredicted RBP24.09■■□□□ 1.45
SF3A2-204ENST00000589118 MAST1Q9Y2H9 1570 aa24.08■■□□□ 1.45
SF3A2-204ENST00000589118 SYNMO15061 1565 aa24.07■■□□□ 1.44
SF3A2-204ENST00000589118 LRRC9Q6ZRR7 1453 aa24.07■■□□□ 1.44
SF3A2-204ENST00000589118 TXNDC2Q86VQ3 553 aa24.06■■□□□ 1.44
SF3A2-204ENST00000589118 EIF2AK4Q9P2K8 1649 aaKnown RBP24.06■■□□□ 1.44
SF3A2-204ENST00000589118 SCAF11Q99590 1463 aaKnown RBP24.04■■□□□ 1.44
SF3A2-204ENST00000589118 LOC105371045A0A1W2PR82 267 aa24.01■■□□□ 1.43
SF3A2-204ENST00000589118 RBM33Q96EV2 1170 aaKnown RBP24.01■■□□□ 1.43
SF3A2-204ENST00000589118 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.01■■□□□ 1.432e-6■□□□□ 10.4
SF3A2-204ENST00000589118 ARHGAP23Q9P227 1491 aa24■■□□□ 1.43
SF3A2-204ENST00000589118 PIK3C2BO00750 1634 aa23.99■■□□□ 1.43
SF3A2-204ENST00000589118 RRP7BPQ9NSQ0 103 aa23.98■■□□□ 1.43
SF3A2-204ENST00000589118 SLIT1O75093 1534 aa23.97■■□□□ 1.43
SF3A2-204ENST00000589118 DUOX2Q9NRD8 1548 aa23.96■■□□□ 1.43
SF3A2-204ENST00000589118 VPS8Q8N3P4 1428 aa23.95■■□□□ 1.42
SF3A2-204ENST00000589118 MYOM3Q5VTT5 1437 aa23.94■■□□□ 1.42
SF3A2-204ENST00000589118 POTEAQ6S8J7 498 aa23.93■■□□□ 1.42
SF3A2-204ENST00000589118 EID1Q9Y6B2 187 aa23.93■■□□□ 1.42
SF3A2-204ENST00000589118 KIF15Q9NS87 1388 aa23.92■■□□□ 1.42
SF3A2-204ENST00000589118 SLC26A8Q96RN1 970 aa23.92■■□□□ 1.42
SF3A2-204ENST00000589118 STAG3Q9UJ98 1225 aa23.91■■□□□ 1.42
SF3A2-204ENST00000589118 PRDM15P57071 1507 aaPredicted RBP23.9■■□□□ 1.42
SF3A2-204ENST00000589118 ABCC5O15440 1437 aa23.9■■□□□ 1.42
SF3A2-204ENST00000589118 TMEM94Q12767 1356 aa23.9■■□□□ 1.42
SF3A2-204ENST00000589118 TMEM2Q9UHN6 1383 aa23.9■■□□□ 1.42
SF3A2-204ENST00000589118 CROCC2H7BZ55 1655 aa23.89■■□□□ 1.42
SF3A2-204ENST00000589118 IDI1Q13907 227 aa23.89■■□□□ 1.41
SF3A2-204ENST00000589118 ARHGAP31Q2M1Z3 1444 aa23.89■■□□□ 1.41
SF3A2-204ENST00000589118 ROBO1Q9Y6N7 1651 aa23.87■■□□□ 1.41
SF3A2-204ENST00000589118 CHIC2Q9UKJ5 165 aa23.87■■□□□ 1.41
SF3A2-204ENST00000589118 FAM135BQ49AJ0 1406 aa23.86■■□□□ 1.41
SF3A2-204ENST00000589118 PROSER2Q86WR7 435 aaPredicted RBP23.86■■□□□ 1.41
SF3A2-204ENST00000589118 KCNA6P17658 529 aa23.84■■□□□ 1.41
SF3A2-204ENST00000589118 PTPN23Q9H3S7 1636 aa23.84■■□□□ 1.41
SF3A2-204ENST00000589118 MAP3K1Q13233 1512 aa23.84■■□□□ 1.41
SF3A2-204ENST00000589118 ERBINQ96RT1 1412 aa23.84■■□□□ 1.41
SF3A2-204ENST00000589118 EFCAB6Q5THR3 1501 aa23.83■■□□□ 1.41
SF3A2-204ENST00000589118 TET3O43151 1660 aa23.83■■□□□ 1.4
SF3A2-204ENST00000589118 SETD1AO15047 1707 aaKnown RBP23.81■■□□□ 1.4
SF3A2-204ENST00000589118 DAPK1P53355 1430 aa23.8■■□□□ 1.4
SF3A2-204ENST00000589118 BCANQ96GW7 911 aa23.79■■□□□ 1.4
SF3A2-204ENST00000589118 KANK1Q14678 1352 aa23.78■■□□□ 1.4
SF3A2-204ENST00000589118 MYO5BQ9ULV0 1848 aa23.77■■□□□ 1.4
SF3A2-204ENST00000589118 KDM5AP29375 1690 aaKnown RBP23.75■■□□□ 1.39
SF3A2-204ENST00000589118 PHLPP1O60346 1717 aa23.74■■□□□ 1.39
SF3A2-204ENST00000589118 NOS1P29475 1434 aa23.72■■□□□ 1.39
SF3A2-204ENST00000589118 ADGRB3O60242 1522 aa23.72■■□□□ 1.39
SF3A2-204ENST00000589118 LMTK2Q8IWU2 1503 aa23.72■■□□□ 1.39
SF3A2-204ENST00000589118 NWD1Q149M9 1564 aa23.71■■□□□ 1.39
SF3A2-204ENST00000589118 SLAIN2Q9P270 581 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms