RNA–Protein interactions for RNA: ENST00000587396.1

CXXC1-210, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-210ENST00000587396 SHANK2Q9UPX8 1470 aa29.26■■■□□ 2.27
CXXC1-210ENST00000587396 KIF3BO15066 747 aa29.26■■■□□ 2.27
CXXC1-210ENST00000587396 SENP3Q9H4L4 574 aaPredicted RBP29.26■■■□□ 2.27
CXXC1-210ENST00000587396 NEURL4Q96JN8 1562 aa29.25■■■□□ 2.27
CXXC1-210ENST00000587396 DHX29Q7Z478 1369 aaKnown RBP29.25■■■□□ 2.27
CXXC1-210ENST00000587396 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.25■■■□□ 2.273e-6■■■■□ 26.4
CXXC1-210ENST00000587396 MBD5Q9P267 1494 aa29.24■■■□□ 2.27
CXXC1-210ENST00000587396 CPS1P31327 1500 aa29.22■■■□□ 2.27
CXXC1-210ENST00000587396 ANKLE2Q86XL3 938 aa29.21■■■□□ 2.27
CXXC1-210ENST00000587396 TIAM1Q13009 1591 aa29.19■■■□□ 2.26
CXXC1-210ENST00000587396 PHF23Q9BUL5 403 aaPredicted RBP29.19■■■□□ 2.26
CXXC1-210ENST00000587396 POLR1AO95602 1720 aaPredicted RBP29.18■■■□□ 2.26
CXXC1-210ENST00000587396 RTEL1-TNFRSF6BF6WH68 1400 aa29.18■■■□□ 2.26
CXXC1-210ENST00000587396 WASHC2CQ9Y4E1 1318 aa29.18■■■□□ 2.26
CXXC1-210ENST00000587396 PZPP20742 1482 aa29.16■■■□□ 2.26
CXXC1-210ENST00000587396 THEMISQ8N1K5 641 aaPredicted RBP29.15■■■□□ 2.26
CXXC1-210ENST00000587396 VWDEQ8N2E2 1590 aa29.14■■■□□ 2.26
CXXC1-210ENST00000587396 MIA2Q96PC5 1412 aa29.12■■■□□ 2.25
CXXC1-210ENST00000587396 KDM5DQ9BY66 1539 aa29.12■■■□□ 2.25
CXXC1-210ENST00000587396 ALKQ9UM73 1620 aa29.12■■■□□ 2.25
CXXC1-210ENST00000587396 NPHP4O75161 1426 aaPredicted RBP29.11■■■□□ 2.25
CXXC1-210ENST00000587396 UGGT1Q9NYU2 1555 aa29.08■■■□□ 2.25
CXXC1-210ENST00000587396 EHBP1L1Q8N3D4 1523 aa29.06■■■□□ 2.24
CXXC1-210ENST00000587396 FAM135AQ9P2D6 1515 aa29.05■■■□□ 2.24
CXXC1-210ENST00000587396 CCDC141Q6ZP82 1450 aa29.05■■■□□ 2.24
CXXC1-210ENST00000587396 CEP162Q5TB80 1403 aa29.05■■■□□ 2.24
CXXC1-210ENST00000587396 MED14O60244 1454 aa29.04■■■□□ 2.24
CXXC1-210ENST00000587396 NLRP1Q9C000 1473 aa29.04■■■□□ 2.24
CXXC1-210ENST00000587396 CAMSAP2Q08AD1 1489 aa29.02■■■□□ 2.24
CXXC1-210ENST00000587396 LRRC7Q96NW7 1537 aa28.99■■■□□ 2.23
CXXC1-210ENST00000587396 DEPDC5O75140 1603 aa28.98■■■□□ 2.23
CXXC1-210ENST00000587396 STRCP1A6NGW2 1772 aa28.97■■■□□ 2.23
CXXC1-210ENST00000587396 IQGAP1P46940 1657 aa28.96■■■□□ 2.23
CXXC1-210ENST00000587396 RSPH4AQ5TD94 716 aa28.96■■■□□ 2.23
CXXC1-210ENST00000587396 NCOA2Q15596 1464 aa28.96■■■□□ 2.23
CXXC1-210ENST00000587396 TSPY4P0CV99 314 aa28.94■■■□□ 2.22
CXXC1-210ENST00000587396 TSPY10P0CW01 314 aa28.94■■■□□ 2.22
CXXC1-210ENST00000587396 RGS17Q9UGC6 210 aaPredicted RBP28.92■■■□□ 2.22
CXXC1-210ENST00000587396 ABCC3O15438 1527 aa28.89■■■□□ 2.21
CXXC1-210ENST00000587396 ERVK-7P63135 1459 aa28.87■■■□□ 2.21
CXXC1-210ENST00000587396 RNF17Q9BXT8 1623 aaKnown RBP28.87■■■□□ 2.21
CXXC1-210ENST00000587396 LTKP29376 864 aa28.85■■■□□ 2.21
CXXC1-210ENST00000587396 ARHGEF5Q12774 1597 aa28.83■■■□□ 2.21
CXXC1-210ENST00000587396 TXNDC2Q86VQ3 553 aa28.82■■■□□ 2.2
CXXC1-210ENST00000587396 SYNMO15061 1565 aa28.82■■■□□ 2.2
CXXC1-210ENST00000587396 SCAF11Q99590 1463 aaKnown RBP28.79■■■□□ 2.2
CXXC1-210ENST00000587396 ZC3H13Q5T200 1668 aaKnown RBP28.79■■■□□ 2.2
CXXC1-210ENST00000587396 CFAP65Q6ZU64 1925 aaKnown RBP28.76■■■□□ 2.19
CXXC1-210ENST00000587396 UBR1Q8IWV7 1749 aa28.75■■■□□ 2.19
CXXC1-210ENST00000587396 MROH1Q8NDA8 1641 aa28.74■■■□□ 2.19
CXXC1-210ENST00000587396 POTEAQ6S8J7 498 aa28.73■■■□□ 2.19
CXXC1-210ENST00000587396 CEP152O94986 1710 aa28.72■■■□□ 2.19
CXXC1-210ENST00000587396 RBM33Q96EV2 1170 aaKnown RBP28.7■■■□□ 2.18
CXXC1-210ENST00000587396 EID1Q9Y6B2 187 aa28.7■■■□□ 2.18
CXXC1-210ENST00000587396 ARHGAP23Q9P227 1491 aa28.7■■■□□ 2.18
CXXC1-210ENST00000587396 MAST1Q9Y2H9 1570 aa28.69■■■□□ 2.18
CXXC1-210ENST00000587396 XIRP1Q702N8 1843 aaKnown RBP28.68■■■□□ 2.18
CXXC1-210ENST00000587396 SLIT1O75093 1534 aa28.68■■■□□ 2.18
CXXC1-210ENST00000587396 EIF2AK4Q9P2K8 1649 aaKnown RBP28.67■■■□□ 2.18
CXXC1-210ENST00000587396 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.66■■■□□ 2.185e-7■■■■□ 20.1
CXXC1-210ENST00000587396 KANK4Q5T7N3 995 aaPredicted RBP28.65■■■□□ 2.18
CXXC1-210ENST00000587396 FAM135BQ49AJ0 1406 aa28.65■■■□□ 2.18
CXXC1-210ENST00000587396 LRRC9Q6ZRR7 1453 aa28.65■■■□□ 2.18
CXXC1-210ENST00000587396 TMEM94Q12767 1356 aa28.64■■■□□ 2.18
CXXC1-210ENST00000587396 STAG3Q9UJ98 1225 aa28.63■■■□□ 2.17
CXXC1-210ENST00000587396 RRP7BPQ9NSQ0 103 aa28.62■■■□□ 2.17
CXXC1-210ENST00000587396 SLC26A8Q96RN1 970 aa28.61■■■□□ 2.17
CXXC1-210ENST00000587396 TMEM2Q9UHN6 1383 aa28.61■■■□□ 2.17
CXXC1-210ENST00000587396 DUOX2Q9NRD8 1548 aa28.6■■■□□ 2.17
CXXC1-210ENST00000587396 PROSER2Q86WR7 435 aaPredicted RBP28.59■■■□□ 2.17
CXXC1-210ENST00000587396 KIF15Q9NS87 1388 aa28.58■■■□□ 2.17
CXXC1-210ENST00000587396 ARHGAP31Q2M1Z3 1444 aa28.58■■■□□ 2.17
CXXC1-210ENST00000587396 KCNA6P17658 529 aa28.57■■■□□ 2.16
CXXC1-210ENST00000587396 PIK3C2BO00750 1634 aa28.57■■■□□ 2.16
CXXC1-210ENST00000587396 MYOM3Q5VTT5 1437 aa28.55■■■□□ 2.16
CXXC1-210ENST00000587396 IDI1Q13907 227 aa28.55■■■□□ 2.16
CXXC1-210ENST00000587396 ROBO1Q9Y6N7 1651 aa28.53■■■□□ 2.16
CXXC1-210ENST00000587396 PRDM15P57071 1507 aaPredicted RBP28.53■■■□□ 2.16
CXXC1-210ENST00000587396 MAP3K1Q13233 1512 aa28.51■■■□□ 2.15
CXXC1-210ENST00000587396 VPS8Q8N3P4 1428 aa28.5■■■□□ 2.15
CXXC1-210ENST00000587396 EFCAB6Q5THR3 1501 aa28.48■■■□□ 2.15
CXXC1-210ENST00000587396 BCANQ96GW7 911 aa28.48■■■□□ 2.15
CXXC1-210ENST00000587396 ABCC5O15440 1437 aa28.48■■■□□ 2.15
CXXC1-210ENST00000587396 ERBINQ96RT1 1412 aa28.48■■■□□ 2.15
CXXC1-210ENST00000587396 KANK1Q14678 1352 aa28.46■■■□□ 2.15
CXXC1-210ENST00000587396 TET3O43151 1660 aa28.45■■■□□ 2.14
CXXC1-210ENST00000587396 SETD1AO15047 1707 aaKnown RBP28.44■■■□□ 2.14
CXXC1-210ENST00000587396 LOC105371045A0A1W2PR82 267 aa28.44■■■□□ 2.14
CXXC1-210ENST00000587396 SLAIN2Q9P270 581 aa28.44■■■□□ 2.14
CXXC1-210ENST00000587396 CHIC2Q9UKJ5 165 aa28.44■■■□□ 2.14
CXXC1-210ENST00000587396 MSH6P52701 1360 aa28.41■■■□□ 2.14
CXXC1-210ENST00000587396 JCADQ9P266 1359 aa28.37■■■□□ 2.13
CXXC1-210ENST00000587396 DAPK1P53355 1430 aa28.36■■■□□ 2.13
CXXC1-210ENST00000587396 NKTRP30414 1462 aaKnown RBP28.36■■■□□ 2.13
CXXC1-210ENST00000587396 CROCC2H7BZ55 1655 aa28.35■■■□□ 2.13
CXXC1-210ENST00000587396 PHLPP1O60346 1717 aa28.35■■■□□ 2.13
CXXC1-210ENST00000587396 NWD1Q149M9 1564 aa28.34■■■□□ 2.13
CXXC1-210ENST00000587396 NOS1P29475 1434 aa28.34■■■□□ 2.13
CXXC1-210ENST00000587396 LMTK2Q8IWU2 1503 aa28.33■■■□□ 2.13
CXXC1-210ENST00000587396 ADGRB3O60242 1522 aa28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms