RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 SHANK2Q9UPX8 1470 aa13.96□□□□□ -0.17
SDF2-204ENST00000587338 NEURL4Q96JN8 1562 aa13.96□□□□□ -0.18
SDF2-204ENST00000587338 TNRQ92752 1358 aa13.96□□□□□ -0.18
SDF2-204ENST00000587338 ZNF644Q9H582 1327 aaPredicted RBP13.93□□□□□ -0.18
SDF2-204ENST00000587338 FBXO31Q5XUX0 539 aaPredicted RBP13.93□□□□□ -0.18
SDF2-204ENST00000587338 MTUS2Q5JR59 1369 aa13.93□□□□□ -0.18
SDF2-204ENST00000587338 ANKLE2Q86XL3 938 aa13.91□□□□□ -0.18
SDF2-204ENST00000587338 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.91□□□□□ -0.18
SDF2-204ENST00000587338 PZPP20742 1482 aa13.91□□□□□ -0.18
SDF2-204ENST00000587338 VWDEQ8N2E2 1590 aa13.91□□□□□ -0.18
SDF2-204ENST00000587338 KDM5DQ9BY66 1539 aa13.9□□□□□ -0.18
SDF2-204ENST00000587338 KIF3BO15066 747 aa13.9□□□□□ -0.18
SDF2-204ENST00000587338 DHX29Q7Z478 1369 aaKnown RBP13.9□□□□□ -0.18
SDF2-204ENST00000587338 TIAM1Q13009 1591 aa13.89□□□□□ -0.19
SDF2-204ENST00000587338 MBD5Q9P267 1494 aa13.89□□□□□ -0.19
SDF2-204ENST00000587338 RTEL1-TNFRSF6BF6WH68 1400 aa13.89□□□□□ -0.19
SDF2-204ENST00000587338 NPHP4O75161 1426 aaPredicted RBP13.89□□□□□ -0.19
SDF2-204ENST00000587338 ALKQ9UM73 1620 aa13.88□□□□□ -0.19
SDF2-204ENST00000587338 WASHC2CQ9Y4E1 1318 aa13.88□□□□□ -0.19
SDF2-204ENST00000587338 THEMISQ8N1K5 641 aaPredicted RBP13.87□□□□□ -0.19
SDF2-204ENST00000587338 UGGT1Q9NYU2 1555 aa13.87□□□□□ -0.19
SDF2-204ENST00000587338 NLRP1Q9C000 1473 aa13.87□□□□□ -0.19
SDF2-204ENST00000587338 FAM135AQ9P2D6 1515 aa13.86□□□□□ -0.19
SDF2-204ENST00000587338 MIA2Q96PC5 1412 aa13.86□□□□□ -0.19
SDF2-204ENST00000587338 DEPDC5O75140 1603 aa13.85□□□□□ -0.19
SDF2-204ENST00000587338 MED14O60244 1454 aa13.85□□□□□ -0.19
SDF2-204ENST00000587338 EHBP1L1Q8N3D4 1523 aa13.85□□□□□ -0.19
SDF2-204ENST00000587338 CCDC141Q6ZP82 1450 aa13.84□□□□□ -0.19
SDF2-204ENST00000587338 IQGAP1P46940 1657 aa13.84□□□□□ -0.19
SDF2-204ENST00000587338 RNF17Q9BXT8 1623 aaKnown RBP13.82□□□□□ -0.2
SDF2-204ENST00000587338 LRRC7Q96NW7 1537 aa13.82□□□□□ -0.2
SDF2-204ENST00000587338 CEP162Q5TB80 1403 aa13.81□□□□□ -0.2
SDF2-204ENST00000587338 CAMSAP2Q08AD1 1489 aa13.81□□□□□ -0.2
SDF2-204ENST00000587338 SYNMO15061 1565 aa13.81□□□□□ -0.2
SDF2-204ENST00000587338 STRCP1A6NGW2 1772 aa13.8□□□□□ -0.2
SDF2-204ENST00000587338 ABCC3O15438 1527 aa13.76□□□□□ -0.21
SDF2-204ENST00000587338 RSPH4AQ5TD94 716 aa13.76□□□□□ -0.21
SDF2-204ENST00000587338 RGS17Q9UGC6 210 aaPredicted RBP13.76□□□□□ -0.21
SDF2-204ENST00000587338 ERVK-7P63135 1459 aa13.75□□□□□ -0.21
SDF2-204ENST00000587338 NCOA2Q15596 1464 aa13.75□□□□□ -0.21
SDF2-204ENST00000587338 TSPY4P0CV99 314 aa13.75□□□□□ -0.21
SDF2-204ENST00000587338 TSPY10P0CW01 314 aa13.75□□□□□ -0.21
SDF2-204ENST00000587338 ZC3H13Q5T200 1668 aaKnown RBP13.74□□□□□ -0.21
SDF2-204ENST00000587338 SCAF11Q99590 1463 aaKnown RBP13.74□□□□□ -0.21
SDF2-204ENST00000587338 ARHGEF5Q12774 1597 aa13.73□□□□□ -0.21
SDF2-204ENST00000587338 UBR1Q8IWV7 1749 aa13.71□□□□□ -0.21
SDF2-204ENST00000587338 LTKP29376 864 aa13.69□□□□□ -0.22
SDF2-204ENST00000587338 TXNDC2Q86VQ3 553 aa13.69□□□□□ -0.22
SDF2-204ENST00000587338 MROH1Q8NDA8 1641 aa13.68□□□□□ -0.22
SDF2-204ENST00000587338 EIF2AK4Q9P2K8 1649 aaKnown RBP13.68□□□□□ -0.22
SDF2-204ENST00000587338 CEP152O94986 1710 aa13.68□□□□□ -0.22
SDF2-204ENST00000587338 POTEAQ6S8J7 498 aa13.68□□□□□ -0.22
SDF2-204ENST00000587338 SLIT1O75093 1534 aa13.68□□□□□ -0.22
SDF2-204ENST00000587338 CFAP65Q6ZU64 1925 aaKnown RBP13.68□□□□□ -0.22
SDF2-204ENST00000587338 ARHGAP23Q9P227 1491 aa13.67□□□□□ -0.22
SDF2-204ENST00000587338 XIRP1Q702N8 1843 aaKnown RBP13.67□□□□□ -0.22
SDF2-204ENST00000587338 FAM135BQ49AJ0 1406 aa13.67□□□□□ -0.22
SDF2-204ENST00000587338 EID1Q9Y6B2 187 aa13.67□□□□□ -0.22
SDF2-204ENST00000587338 MAST1Q9Y2H9 1570 aa13.66□□□□□ -0.22
SDF2-204ENST00000587338 TMEM94Q12767 1356 aa13.65□□□□□ -0.22
SDF2-204ENST00000587338 STAG3Q9UJ98 1225 aa13.63□□□□□ -0.23
SDF2-204ENST00000587338 ROBO1Q9Y6N7 1651 aa13.63□□□□□ -0.23
SDF2-204ENST00000587338 TMEM2Q9UHN6 1383 aa13.62□□□□□ -0.23
SDF2-204ENST00000587338 RBM33Q96EV2 1170 aaKnown RBP13.62□□□□□ -0.23
SDF2-204ENST00000587338 DUOX2Q9NRD8 1548 aa13.62□□□□□ -0.23
SDF2-204ENST00000587338 PIK3C2BO00750 1634 aa13.61□□□□□ -0.23
SDF2-204ENST00000587338 PRDM15P57071 1507 aaPredicted RBP13.61□□□□□ -0.23
SDF2-204ENST00000587338 ARHGAP31Q2M1Z3 1444 aa13.61□□□□□ -0.23
SDF2-204ENST00000587338 SETD1AO15047 1707 aaKnown RBP13.61□□□□□ -0.23
SDF2-204ENST00000587338 MAP3K1Q13233 1512 aa13.6□□□□□ -0.23
SDF2-204ENST00000587338 KCNA6P17658 529 aa13.6□□□□□ -0.23
SDF2-204ENST00000587338 PROSER2Q86WR7 435 aaPredicted RBP13.6□□□□□ -0.23
SDF2-204ENST00000587338 LRRC9Q6ZRR7 1453 aa13.6□□□□□ -0.23
SDF2-204ENST00000587338 KIF15Q9NS87 1388 aa13.59□□□□□ -0.23
SDF2-204ENST00000587338 SLC26A8Q96RN1 970 aa13.59□□□□□ -0.23
SDF2-204ENST00000587338 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.59□□□□□ -0.23
SDF2-204ENST00000587338 EFCAB6Q5THR3 1501 aa13.59□□□□□ -0.23
SDF2-204ENST00000587338 MYOM3Q5VTT5 1437 aa13.57□□□□□ -0.24
SDF2-204ENST00000587338 ERBINQ96RT1 1412 aa13.56□□□□□ -0.24
SDF2-204ENST00000587338 RRP7BPQ9NSQ0 103 aa13.56□□□□□ -0.24
SDF2-204ENST00000587338 MSH6P52701 1360 aa13.56□□□□□ -0.24
SDF2-204ENST00000587338 KANK1Q14678 1352 aa13.56□□□□□ -0.24
SDF2-204ENST00000587338 NKTRP30414 1462 aaKnown RBP13.55□□□□□ -0.24
SDF2-204ENST00000587338 BCANQ96GW7 911 aa13.55□□□□□ -0.24
SDF2-204ENST00000587338 PHLPP1O60346 1717 aa13.55□□□□□ -0.24
SDF2-204ENST00000587338 JCADQ9P266 1359 aa13.55□□□□□ -0.24
SDF2-204ENST00000587338 TET3O43151 1660 aa13.54□□□□□ -0.24
SDF2-204ENST00000587338 IDI1Q13907 227 aa13.54□□□□□ -0.24
SDF2-204ENST00000587338 NWD1Q149M9 1564 aa13.54□□□□□ -0.24
SDF2-204ENST00000587338 KDM5AP29375 1690 aaKnown RBP13.53□□□□□ -0.24
SDF2-204ENST00000587338 KANK4Q5T7N3 995 aaPredicted RBP13.53□□□□□ -0.24
SDF2-204ENST00000587338 SLAIN2Q9P270 581 aa13.53□□□□□ -0.24
SDF2-204ENST00000587338 VPS8Q8N3P4 1428 aa13.53□□□□□ -0.24
SDF2-204ENST00000587338 ADGRB3O60242 1522 aa13.52□□□□□ -0.25
SDF2-204ENST00000587338 CROCC2H7BZ55 1655 aa13.52□□□□□ -0.25
SDF2-204ENST00000587338 ABCC5O15440 1437 aa13.51□□□□□ -0.25
SDF2-204ENST00000587338 MEX3CQ5U5Q3 659 aaKnown RBP13.51□□□□□ -0.25
SDF2-204ENST00000587338 SRCAPQ6ZRS2 3230 aa13.51□□□□□ -0.25
SDF2-204ENST00000587338 LRP6O75581 1613 aa13.5□□□□□ -0.25
SDF2-204ENST00000587338 LMTK2Q8IWU2 1503 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms