RNA–Protein interactions for RNA: ENST00000585876.1

LRFN3-202, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

TSL 4

Gene LRFN3, Length 558 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-202ENST00000585876 PRDM15P57071 1507 aaPredicted RBP17.83■□□□□ 0.45
LRFN3-202ENST00000585876 ROCK1Q13464 1354 aa17.83■□□□□ 0.45
LRFN3-202ENST00000585876 KDM5DQ9BY66 1539 aa17.81■□□□□ 0.44
LRFN3-202ENST00000585876 GCC2Q8IWJ2 1684 aa17.8■□□□□ 0.44
LRFN3-202ENST00000585876 PPP6R1Q9UPN7 881 aa17.79■□□□□ 0.44
LRFN3-202ENST00000585876 MLECQ14165 292 aa17.78■□□□□ 0.44
LRFN3-202ENST00000585876 SETD1BQ9UPS6 1966 aaKnown RBP17.77■□□□□ 0.43
LRFN3-202ENST00000585876 CEP152O94986 1710 aa17.76■□□□□ 0.43
LRFN3-202ENST00000585876 UNC13BO14795 1591 aa17.76■□□□□ 0.43
LRFN3-202ENST00000585876 VWDEQ8N2E2 1590 aa17.76■□□□□ 0.43
LRFN3-202ENST00000585876 AEBP2Q6ZN18 517 aaPredicted RBP17.76■□□□□ 0.43
LRFN3-202ENST00000585876 PREX1Q8TCU6 1659 aa17.76■□□□□ 0.43
LRFN3-202ENST00000585876 ABCC3O15438 1527 aa17.75■□□□□ 0.43
LRFN3-202ENST00000585876 CAMSAP1Q5T5Y3 1602 aa17.74■□□□□ 0.43
LRFN3-202ENST00000585876 KIF3BO15066 747 aa17.74■□□□□ 0.43
LRFN3-202ENST00000585876 RRP7BPQ9NSQ0 103 aa17.74■□□□□ 0.43
LRFN3-202ENST00000585876 CHIC2Q9UKJ5 165 aa17.74■□□□□ 0.43
LRFN3-202ENST00000585876 ANKRD50Q9ULJ7 1429 aa17.73■□□□□ 0.43
LRFN3-202ENST00000585876 LMTK2Q8IWU2 1503 aa17.72■□□□□ 0.43
LRFN3-202ENST00000585876 NPATQ14207 1427 aa17.72■□□□□ 0.43
LRFN3-202ENST00000585876 GGT6Q6P531 493 aa17.7■□□□□ 0.42
LRFN3-202ENST00000585876 PZPP20742 1482 aa17.69■□□□□ 0.42
LRFN3-202ENST00000585876 ZNF142P52746 1687 aaPredicted RBP17.69■□□□□ 0.42
LRFN3-202ENST00000585876 ZMYM3Q14202 1370 aa17.68■□□□□ 0.42
LRFN3-202ENST00000585876 HFM1A2PYH4 1435 aa17.68■□□□□ 0.42
LRFN3-202ENST00000585876 ESF1Q9H501 851 aaKnown RBP17.68■□□□□ 0.42
LRFN3-202ENST00000585876 IQGAP3Q86VI3 1631 aa17.68■□□□□ 0.42
LRFN3-202ENST00000585876 MYO3AQ8NEV4 1616 aa17.68■□□□□ 0.42
LRFN3-202ENST00000585876 LMTK3Q96Q04 1460 aa17.68■□□□□ 0.42
LRFN3-202ENST00000585876 NAIPQ13075 1403 aa17.67■□□□□ 0.42
LRFN3-202ENST00000585876 TET3O43151 1660 aa17.67■□□□□ 0.42
LRFN3-202ENST00000585876 EFCAB6Q5THR3 1501 aa17.66■□□□□ 0.42
LRFN3-202ENST00000585876 ARHGAP31Q2M1Z3 1444 aa17.65■□□□□ 0.42
LRFN3-202ENST00000585876 SPATA31D1Q6ZQQ2 1576 aa17.64■□□□□ 0.41
LRFN3-202ENST00000585876 WASHC2CQ9Y4E1 1318 aa17.64■□□□□ 0.41
LRFN3-202ENST00000585876 ITGAEP38570 1179 aa17.63■□□□□ 0.41
LRFN3-202ENST00000585876 KANK1Q14678 1352 aa17.63■□□□□ 0.41
LRFN3-202ENST00000585876 CEBPAP49715 358 aaPredicted RBP17.61■□□□□ 0.41
LRFN3-202ENST00000585876 CFAP65Q6ZU64 1925 aaKnown RBP17.6■□□□□ 0.41
LRFN3-202ENST00000585876 CEP170BQ9Y4F5 1589 aaPredicted RBP17.59■□□□□ 0.41
LRFN3-202ENST00000585876 ERVK-7P63135 1459 aa17.59■□□□□ 0.41
LRFN3-202ENST00000585876 RPRD2Q5VT52 1461 aaKnown RBP17.59■□□□□ 0.41
LRFN3-202ENST00000585876 UHRF1BP1Q6BDS2 1440 aa17.59■□□□□ 0.41
LRFN3-202ENST00000585876 E9PCH4 1651 aa17.58■□□□□ 0.41
LRFN3-202ENST00000585876 NLRP1Q9C000 1473 aa17.56■□□□□ 0.4
LRFN3-202ENST00000585876 KDM5AP29375 1690 aaKnown RBP17.55■□□□□ 0.4
LRFN3-202ENST00000585876 TNRQ92752 1358 aa17.53■□□□□ 0.4
LRFN3-202ENST00000585876 SYNMO15061 1565 aa17.53■□□□□ 0.4
LRFN3-202ENST00000585876 A2ML1A8K2U0 1454 aa17.53■□□□□ 0.4
LRFN3-202ENST00000585876 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.52■□□□□ 0.4
LRFN3-202ENST00000585876 NOS1P29475 1434 aa17.52■□□□□ 0.4
LRFN3-202ENST00000585876 PIK3C2BO00750 1634 aa17.51■□□□□ 0.39
LRFN3-202ENST00000585876 STRCQ7RTU9 1775 aa17.51■□□□□ 0.39
LRFN3-202ENST00000585876 SPHKAPQ2M3C7 1700 aa17.51■□□□□ 0.39
LRFN3-202ENST00000585876 PLPPR3Q6T4P5 718 aa17.51■□□□□ 0.39
LRFN3-202ENST00000585876 UBR1Q8IWV7 1749 aa17.51■□□□□ 0.39
LRFN3-202ENST00000585876 FBXO31Q5XUX0 539 aaPredicted RBP17.5■□□□□ 0.39
LRFN3-202ENST00000585876 NUP155O75694 1391 aa17.5■□□□□ 0.39
LRFN3-202ENST00000585876 PLA2R1Q13018 1463 aa17.49■□□□□ 0.39
LRFN3-202ENST00000585876 POLR1AO95602 1720 aaPredicted RBP17.48■□□□□ 0.39
LRFN3-202ENST00000585876 SETD5Q9C0A6 1442 aa17.47■□□□□ 0.39
LRFN3-202ENST00000585876 ACIN1Q9UKV3 1341 aaKnown RBP17.47■□□□□ 0.39
LRFN3-202ENST00000585876 UGGT1Q9NYU2 1555 aa17.46■□□□□ 0.39
LRFN3-202ENST00000585876 ADGRB3O60242 1522 aa17.43■□□□□ 0.38
LRFN3-202ENST00000585876 MYO5BQ9ULV0 1848 aa17.42■□□□□ 0.38
LRFN3-202ENST00000585876 TRPM2O94759 1503 aa17.42■□□□□ 0.38
LRFN3-202ENST00000585876 PTPRTO14522 1441 aa17.42■□□□□ 0.38
LRFN3-202ENST00000585876 HSPA2P54652 639 aa17.41■□□□□ 0.38
LRFN3-202ENST00000585876 RAB3GAP2Q9H2M9 1393 aa17.4■□□□□ 0.38
LRFN3-202ENST00000585876 TMEM131LA2VDJ0 1609 aa17.4■□□□□ 0.38
LRFN3-202ENST00000585876 SLIT1O75093 1534 aa17.4■□□□□ 0.38
LRFN3-202ENST00000585876 NEURL4Q96JN8 1562 aa17.4■□□□□ 0.38
LRFN3-202ENST00000585876 ARHGAP23Q9P227 1491 aa17.38■□□□□ 0.37
LRFN3-202ENST00000585876 CLTCL1P53675 1640 aa17.37■□□□□ 0.37
LRFN3-202ENST00000585876 HRCP23327 699 aa17.37■□□□□ 0.37
LRFN3-202ENST00000585876 SLC52A1Q9NWF4 448 aa17.37■□□□□ 0.37
LRFN3-202ENST00000585876 KIF1BO60333 1816 aa17.35■□□□□ 0.37
LRFN3-202ENST00000585876 MED14O60244 1454 aa17.34■□□□□ 0.37
LRFN3-202ENST00000585876 IQGAP1P46940 1657 aa17.33■□□□□ 0.37
LRFN3-202ENST00000585876 IDI1Q13907 227 aa17.33■□□□□ 0.36
LRFN3-202ENST00000585876 THEMISQ8N1K5 641 aaPredicted RBP17.33■□□□□ 0.36
LRFN3-202ENST00000585876 TRIM52Q96A61 297 aa17.33■□□□□ 0.36
LRFN3-202ENST00000585876 PKD2Q13563 968 aa17.31■□□□□ 0.36
LRFN3-202ENST00000585876 SLC4A1APQ9BWU0 796 aaKnown RBP17.31■□□□□ 0.36
LRFN3-202ENST00000585876 SCAF11Q99590 1463 aaKnown RBP17.3■□□□□ 0.36
LRFN3-202ENST00000585876 TMEM2Q9UHN6 1383 aa17.29■□□□□ 0.36
LRFN3-202ENST00000585876 ZFYVE9O95405 1425 aa17.29■□□□□ 0.36
LRFN3-202ENST00000585876 MPHOSPH9Q99550 1183 aa17.28■□□□□ 0.36
LRFN3-202ENST00000585876 DMRT2Q9Y5R5 561 aa17.28■□□□□ 0.36
LRFN3-202ENST00000585876 TRIM26Q12899 539 aaPredicted RBP17.27■□□□□ 0.36
LRFN3-202ENST00000585876 IFT172Q9UG01 1749 aa17.24■□□□□ 0.35
LRFN3-202ENST00000585876 NPHP4O75161 1426 aaPredicted RBP17.24■□□□□ 0.35
LRFN3-202ENST00000585876 ANKLE2Q86XL3 938 aa17.24■□□□□ 0.35
LRFN3-202ENST00000585876 PPLO60437 1756 aa17.24■□□□□ 0.35
LRFN3-202ENST00000585876 NCKAP5LQ9HCH0 1330 aa17.23■□□□□ 0.35
LRFN3-202ENST00000585876 NEXMIFQ5QGS0 1516 aa17.23■□□□□ 0.35
LRFN3-202ENST00000585876 CCDC144AA2RUR9 1427 aa17.21■□□□□ 0.35
LRFN3-202ENST00000585876 RIMS2Q9UQ26 1411 aa17.21■□□□□ 0.35
LRFN3-202ENST00000585876 STAG3Q9UJ98 1225 aa17.21■□□□□ 0.35
LRFN3-202ENST00000585876 LTBP4Q8N2S1 1624 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms